mRNA_P-wetherbeei_contig5314.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5314.1.1
Unique NamemRNA_P-wetherbeei_contig5314.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Match: A0A6H5JMC0_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC0_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 1.890e-41
Identity = 94/204 (46.08%), Postives = 110/204 (53.92%), Query Frame = 1
Query:  127 TEPAGGDDSCSLRGLIWKLLLGAMHIDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDEEFQRRVPEDKLSRLNNAFVRLNFPD------------------------------------------------------VDGLPATPG--LPVRMAAA---EALVGLGSYGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP 561
            T+P G D  CSLRGL+WK+LLG +H D+MLYIRLV +G S  D KIR+DTFRT   DEEF+RRV EDKLSR+NNA+VRLN PD                                                       DG  A  G   P    A    E  VG G  G YVQGM +LCAPLLFVMPEVDAF+CF++LL +H+P
Sbjct:  187 TDP-GEDHQCSLRGLVWKVLLGTIHTDSMLYIRLVAKGPSSEDVKIREDTFRTFPRDEEFRRRVHEDKLSRINNAYVRLNHPDGGAPVAATAAADTVRRGSEGQGREGSGSKDKHGGEEQPPKSEDVPRCSNPAIVHKDGAGAEAGGAAPASGGATGEREERVGDGGKGLYVQGMMVLCAPLLFVMPEVDAFYCFNSLLNQHMP 389          
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Match: D8LM02_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM02_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 1.390e-40
Identity = 90/201 (44.78%), Postives = 105/201 (52.24%), Query Frame = 1
Query:  139 GGDDSCSLRGLIWKLLLGAMHIDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDEEFQRRVPEDKLSRLNNAFVRLNFPDVDGLP------------------------------------------------------------ATPGLPVRMAAAEALVGLGSYGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP 561
            G D  CSLRGL+WK+LLG +H D+MLYIRLV +G S  D KIR+DTFRT   DEEF+RRV EDKLSR+NNA+VRLN PD  G P                                                            A P         E  VG G  G YVQGM +LCAPLLFVMPEVDAF+CF++LL +H+P
Sbjct:  162 GEDHQCSLRGLVWKVLLGTIHTDSMLYIRLVAKGPSSEDVKIREDTFRTFPRDEEFRRRVHEDKLSRINNAYVRLNHPD-GGAPVAATAAADTXXXXXXXXXXXXXXXNDKHGGEEHPPKSEDVPRCSNSSIVDKEGAGAEAGGAAPATGGATGEGEERVGDGGKGLYVQGMMVLCAPLLFVMPEVDAFYCFNSLLNQHMP 361          
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Match: A0A225VL10_9STRA (Rab-GAP TBC domain-containing protein (Fragment) n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225VL10_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.630e-34
Identity = 83/188 (44.15%), Postives = 109/188 (57.98%), Query Frame = 1
Query:   10 LREEYLALLQRRDGDAAAPAGERVKALRRMVLLQGLPTETEPAGGDDS---CSLRGLIWKLLLGAMH-IDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDEEFQRRVPEDKLSRLNNAFVRLNFPDVDGLPATPGLPVRMAAAEALVGLGSYGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP 561
            LR++Y  LL    GD+     ER + L+R+V++ GLP + E  G D +   CSLRG +WK  LG  + +D   Y  LV +GAS  D  IR+DTFRT RGD EF +RVPE+KL RL N F+       + L + PG   +     A  G      YVQGM +LCAPLL+V+PE DA+  F  L+ RH P
Sbjct:   10 LRQQYDTLLA---GDSITADYERWRELKRLVIVHGLPRD-EGFGTDSNASLCSLRGRVWKAFLGVENDVDMTKYAALVGRGASHYDGDIRNDTFRTFRGDSEFAQRVPEEKLVRLLNVFI-------NELGSNPGEEKQEDGEHARGGNLPSIRYVQGMNVLCAPLLYVLPEPDAYHTFCQLIVRHCP 186          
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Match: A0A2P4Y951_9STRA (Bub2 protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y951_9STRA)

HSP 1 Score: 131 bits (330), Expect = 2.700e-34
Identity = 84/191 (43.98%), Postives = 109/191 (57.07%), Query Frame = 1
Query:   10 LREEYLALLQRRDGDAAAPAGERVKALRRMVLLQGLPTETEPAGGDDS------CSLRGLIWKLLLGAMH-IDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDEEFQRRVPEDKLSRLNNAFVRLNFPDVDGLPATPGLPVRMAAAEALVGLGSYGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP 561
            LRE+Y ALL    GD+     ER + L+R+V++ GLP + E  G D        CSLRG +WK  LG  + +D   Y  LV +GAS  D  IR+DTFRT RGD EF +RVPE+KL RL N F+       + L + PG   +     A  G      YVQGM +LCAPLL+V+PE +A+  F  L+ RH P
Sbjct:    6 LREQYDALLA---GDSITADYERWRELKRLVIVHGLPRD-EGFGSDAEGLNASLCSLRGRVWKAFLGVENDVDMTKYAALVGRGASHYDGDIRNDTFRTFRGDSEFAQRVPEEKLVRLLNVFI-------NELGSNPGEDKQNDGEHARGGNLPSIRYVQGMNVLCAPLLYVLPEPEAYHIFCQLIVRHCP 185          
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Match: W2HKV9_PHYPR (Rab-GAP TBC domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2HKV9_PHYPR)

HSP 1 Score: 131 bits (329), Expect = 6.110e-34
Identity = 84/190 (44.21%), Postives = 111/190 (58.42%), Query Frame = 1
Query:   10 LREEYLALLQRRDGDAAAPAGERVKALRRMVLLQGLPTE----TEPAGGDDS-CSLRGLIWKLLLGAMH-IDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDEEFQRRVPEDKLSRLNNAFVRLNFPDVDGLPATPGLPVRMAAAEALVGLGSYGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP 561
            LR++Y ALL    GD      ER + L+R+V++ GLP +    T+  G + S CSLRG +WK  LG  + +D   Y  LV +GAS  D  IR+DTFRT RGD EF +RVPE+KL RL N F+       + L ++PG   +     A  G      YVQGM +LCAPLL+V+PE DA+  F  L+ RH P
Sbjct:   13 LRQQYDALLA---GDPITADYERWRELKRLVIVHGLPRDEGFATDIEGSNASLCSLRGRVWKAFLGVENDVDMTKYAALVGRGASHYDGDIRNDTFRTFRGDLEFAQRVPEEKLVRLLNVFI-------NELGSSPGEEKQEDGDNARNGNLPSIRYVQGMNVLCAPLLYVLPEPDAYHTFCQLIVRHCP 192          
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Match: A0A5D6XHK7_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHK7_9STRA)

HSP 1 Score: 127 bits (320), Expect = 5.090e-32
Identity = 83/195 (42.56%), Postives = 106/195 (54.36%), Query Frame = 1
Query:   10 LREEYLALLQRR----DGDAAAPAG-ERVKALRRMVLLQGLPTETEPAGGD-----DSCSLRGLIWKLLLGA-MHIDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDEEFQRRVPEDKLSRLNNAFVRLNFPDVDGLPATPGLPVRMAAAEALVGLGSYGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP 561
            LR  Y+ALLQ      + DA   +   R + L+RMV+  GLP +   A  D      +CSLRG IWKL LG    +D   Y  L  +GAS  D  IR+DTFRT RGD  F +RVPE+KL+RL N F+              G      A++   G   +  YVQGM ILCAPLL+VMPE DA++ F  L+ +H P
Sbjct:   10 LRRRYVALLQHEAVVDENDALIESDYARWRELKRMVIAFGLPRDEAAAASDADPCGTTCSLRGRIWKLFLGVDAAVDREQYAALAARGASPFDGDIRNDTFRTFRGDPAFAQRVPEEKLARLLNVFIN-----------ELGTGGAHDASQVGEGHPEHIRYVQGMNILCAPLLYVMPEADAYYTFRQLVMKHCP 193          
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Match: A0A3M6VHR9_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHR9_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.410e-31
Identity = 83/201 (41.29%), Postives = 115/201 (57.21%), Query Frame = 1
Query:   10 LREEYLALLQRRDGDAAAPAGERVKALRRMVLLQGLPTETE--PAGGDDSCSLRGLIWKLLLGAMH-IDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDEEFQRRVPEDKLSRLNNAFVRLNFPD------VDGLPATPG-LPV-------RMAAAEALVGLGSYGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP 561
            LR++Y ALL     D+     ER + L+R+V+++GLP + +  P      CSLRG +WK  LG  + +D   Y  LV +GAS  D  IR+DTFRT RGD EF +RVPE+KL RL N F+     D      ++G  A  G LP+       +  + E +  +  +  YVQGM +LCAPLL+V+PE DA+  F  L+ RH P
Sbjct:    5 LRQQYDALLA---DDSITSDYERWRELKRLVIVKGLPRDEDSTPDANSSLCSLRGRVWKAFLGVENDVDMTKYAALVGRGASHYDGDIRNDTFRTFRGDPEFAQRVPEEKLVRLLNVFINELGSDPGDEKQIEGKHAHGGNLPLIRFENKSKNKSVEVVKMI--FLSYVQGMNVLCAPLLYVLPEPDAYHTFCQLIVRHCP 200          
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Match: A0A8K1FBB6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBB6_PYTOL)

HSP 1 Score: 127 bits (318), Expect = 2.390e-31
Identity = 89/209 (42.58%), Postives = 108/209 (51.67%), Query Frame = 1
Query:   10 LREEYLALLQRRDGDAAAPAGERV--------KALRRMVLLQGLP---------------TETEPAGGDDSCSLRGLIWKLLLGAMH--IDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDEEFQRRVPEDKLSRLNNAFVRLNFPDVDGLPATPGLPVRMAAAEALVGLGSYGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP 561
            LR  Y ALL+   GD       RV        + L+RM ++ GLP               T TE   G+D CSLRG IWK  LG     ID + Y  LV+QGAS  D  IR+DTFRT RGD +F  RVPE KL RL NAF    F ++D   ++P L               Y  YVQGM +LCAPLL+VMPE DA+  F  L+ +H P
Sbjct:   18 LRRRYQALLR---GDPVIGPENRVIDAAYDRWRELKRMAIVYGLPRDEGLFFPTLEDNNTTRTEN-NGEDGCSLRGRIWKRFLGVEDATIDVLRYQELVQQGASHYDADIRNDTFRTFRGDAKFAERVPEGKLVRLLNAF----FNELDAGNSSPDLDQA-----------DYIRYVQGMNVLCAPLLYVMPEEDAYHTFCQLILKHCP 207          
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Match: A0A6A3MEJ8_9STRA (Rab-GAP TBC domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MEJ8_9STRA)

HSP 1 Score: 125 bits (315), Expect = 4.020e-31
Identity = 83/188 (44.15%), Postives = 108/188 (57.45%), Query Frame = 1
Query:    7 ALREEYLALLQRRDGDAAAPAG-ERVKALRRMVLLQGLPTETEPAGGDDS-CSLRGLIWKLLLGA-MHIDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDEEFQRRVPEDKLSRLNNAFVRLNFPDVDGLPATPGLPVRMAAAEALVGLGSYGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP 561
            ALR++Y ALL    GD    +  ER + L+R+V++ GLP +    G   S C+LRG +WK  LG    +D   Y  LV +GAS  D  IR+DTFRT RGD EF +RVPE+KL RL N F+       + L + P    +    E    L S   YVQGM +LCAPLL+V+PE DA+  F  L+ RH P
Sbjct:    9 ALRQQYDALLD--GGDTPITSDYERWRELKRLVIVHGLPRDE---GSTPSLCTLRGRVWKAFLGVESDVDMTKYSALVGRGASHYDGDIRNDTFRTFRGDSEFAQRVPEEKLVRLLNVFI-------NELGSNPDRDEKKEDGELGGNLPSIR-YVQGMNVLCAPLLYVLPEPDAYHTFCQLIVRHCP 183          
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Match: A0A2D4C5Z1_PYTIN (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5Z1_PYTIN)

HSP 1 Score: 120 bits (302), Expect = 8.930e-31
Identity = 71/162 (43.83%), Postives = 87/162 (53.70%), Query Frame = 1
Query:   97 MVLLQGLPTETEPAGGDDS-----CSLRGLIWKLLLGAMH--IDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDEEFQRRVPEDKLSRLNNAFVRLNFPDVDGLPATPGLPVRMAAAEALVGLGSYGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP 561
            MV++ GLP +  P  GD       C LRG +WK L G     +D   Y RL+ QGAS  D  IR+DTFRT RGD +F +RVPE KL RL NAF      D                 E   G   Y  YVQG+ +LCAPLL+VMPE +A+F F  L+ +H P
Sbjct:    1 MVIVFGLPRQEAPTTGDPDGEQTRCLLRGRVWKALXGIQDGDVDXAHYERLIAQGASRYDADIRNDTFRTFRGDAKFAQRVPEHKLVRLLNAFFNELHEDA-------------TEEEERTGAFEYIRYVQGINVLCAPLLYVMPEAEAYFTFRHLILKHCP 149          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMC0_9PHAE1.890e-4146.08Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
D8LM02_ECTSI1.390e-4044.78Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A225VL10_9STRA1.630e-3444.15Rab-GAP TBC domain-containing protein (Fragment) n... [more]
A0A2P4Y951_9STRA2.700e-3443.98Bub2 protein n=1 Tax=Phytophthora palmivora var. p... [more]
W2HKV9_PHYPR6.110e-3444.21Rab-GAP TBC domain-containing protein n=8 Tax=Phyt... [more]
A0A5D6XHK7_9STRA5.090e-3242.56Rab-GAP TBC domain-containing protein n=1 Tax=Pyth... [more]
A0A3M6VHR9_9STRA1.410e-3141.29Rab-GAP TBC domain-containing protein n=1 Tax=Pero... [more]
A0A8K1FBB6_PYTOL2.390e-3142.58Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A3MEJ8_9STRA4.020e-3144.15Rab-GAP TBC domain-containing protein n=3 Tax=Phyt... [more]
A0A2D4C5Z1_PYTIN8.930e-3143.83Rab-GAP TBC domain-containing protein (Fragment) n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5314contigP-wetherbeei_contig5314:2..934 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LM02
Preferred namecdc16
PFAMsRabGAP-TBC
Model size561
Max annot lvl2759|Eukaryota
KEGG koko:K02179
KEGG Pathwayko04111,map04111
Hectar predicted targeting categoryother localisation
GOsGO:0000075,GO:0000079,GO:0000278,GO:0000910,GO:0001100,GO:0001932,GO:0001934,GO:0003674,GO:0005096,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005815,GO:0005816,GO:0005856,GO:0006810,GO:0006886,GO:0007049,GO:0007088,GO:0007093,GO:0007096,GO:0007346,GO:0008047,GO:0008104,GO:0008150,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010562,GO:0010564,GO:0010604,GO:0010639,GO:0010646,GO:0010648,GO:0010948,GO:0010965,GO:0010974,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0017016,GO:0017137,GO:0019220,GO:0019222,GO:0019899,GO:0022402,GO:0023051,GO:0023057,GO:0030071,GO:0030234,GO:0030695,GO:0031029,GO:0031030,GO:0031267,GO:0031323,GO:0031325,GO:0031338,GO:0031399,GO:0031401,GO:0031577,GO:0031578,GO:0031991,GO:0032268,GO:0032270,GO:0032465,GO:0032466,GO:0032506,GO:0032879,GO:0032880,GO:0032954,GO:0032955,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033674,GO:0034613,GO:0042325,GO:0042327,GO:0042886,GO:0043085,GO:0043087,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043547,GO:0043549,GO:0044087,GO:0044093,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044464,GO:0044732,GO:0045184,GO:0045737,GO:0045786,GO:0045787,GO:0045839,GO:0045841,GO:0045859,GO:0045860,GO:0045930,GO:0045937,GO:0046578,GO:0046580,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0051020,GO:0051049,GO:0051056,GO:0051058,GO:0051128,GO:0051129,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051301,GO:0051302,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051493,GO:0051641,GO:0051649,GO:0051726,GO:0051782,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0060255,GO:0060341,GO:0060589,GO:0060627,GO:0065007,GO:0065009,GO:0070727,GO:0071174,GO:0071702,GO:0071705,GO:0071900,GO:0071902,GO:0080090,GO:0090630,GO:0098772,GO:0110020,GO:0150005,GO:1901891,GO:1901892,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1902363,GO:1902364,GO:1902412,GO:1902413,GO:1902531,GO:1902532,GO:1902542,GO:1902543,GO:1902773,GO:1903047,GO:1903436,GO:1903437,GO:1903827,GO:1903828,GO:1904029,GO:1904031,GO:1905818,GO:1905819,GO:1990334,GO:2000816,GO:2001251
Exons2
Evalue3.72e-45
EggNOG OGsCOG5210@1|root,KOG2058@2759|Eukaryota
Ec32 ortholog descriptionRab-GTPase-TBC domain
Ec32 orthologEc-14_002320.1
Descriptionactivation of GTPase activity
Cds size561
COG categoryC
BRITEko00000,ko00001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186795.9040768-CDS-P-wetherbeei_contig5314:1..1301683186795.9040768-CDS-P-wetherbeei_contig5314:1..130Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5314 2..130 -
1683186795.9154844-CDS-P-wetherbeei_contig5314:502..9341683186795.9154844-CDS-P-wetherbeei_contig5314:502..934Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5314 503..934 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5314.1.1prot_P-wetherbeei_contig5314.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5314 2..934 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5314.1.1

>prot_P-wetherbeei_contig5314.1.1 ID=prot_P-wetherbeei_contig5314.1.1|Name=mRNA_P-wetherbeei_contig5314.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=187bp
NKALREEYLALLQRRDGDAAAPAGERVKALRRMVLLQGLPTETEPAGGDD
SCSLRGLIWKLLLGAMHIDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDE
EFQRRVPEDKLSRLNNAFVRLNFPDVDGLPATPGLPVRMAAAEALVGLGS
YGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP
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mRNA from alignment at P-wetherbeei_contig5314:2..934-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5314.1.1 ID=mRNA_P-wetherbeei_contig5314.1.1|Name=mRNA_P-wetherbeei_contig5314.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=933bp|location=Sequence derived from alignment at P-wetherbeei_contig5314:2..934- (Phaeothamnion wetherbeei SAG_119_79)
AACAAGGCCCTGCGGGAAGAGTACCTCGCCCTGCTGCAGCGGCGAGACGG CGACGCCGCCGCGCCGGCCGGCGAGCGCGTCAAGGCGCTGCGGCGCATGG TGCTGTTGCAGGGCCTGCCGACCGAGACGGAGCCCGCCGGCGGCGACGAC TCGTGCTCGCTCCGCGGCCTCATCTGGAAGCTTCTTCTCGGCGCCATGCA CATCGACGCCATGCTCTACATCCGGCTGGTGGAGCAGGGCGCCAGCTGGA GCGACTGGAAGATCCGTGACGACACCTTTCGCACGTTGCGCGGCGACGAA GAGTTCCAGCGGCGGGTGCCCGAGGACAAGCTCAGCCGCCTCAACAATGC CTTTGTGAGACTAAACTTTCCAGACGTGGACGGGCTGCCAGCCACCCCGG GGCTCCCAGTGCGGATGGCGGCGGCAGAGGCGGTGGGAGCTGCTGGAGAA GACGGTGGGGCGCATTTGAAGCAGGCCCCACAGCAGGTGGAGCGGCAGAG GCGCCGGACCAACACCGAATCGGCCTCCGCCCCGGTGTCGCCGGTCGACG GCGCCGGTAGCGGCGGCGGCGTCGGCAACGCGGCGCTGGCACCTCCGGCG CGACACCGCAGCGATGCCTCCGCCGCTGCCGACGCGGGCTGTGGCGGTAG CAGCAACCGGGCCGAAAGCGCTACCCGCCGCGGCGACAGCAATGGCAGCA GCGGCGCTATTAGCAGCAGTGGCAGCGGTATCAGCAGCAACGCCGGTGGC GGCACCCATATCAATTCCGGCGGCGGCAATGCTGGCGGCGGCGCGGGCGG CGAGCTGGTGGGACTGGGCAGCTACGGCGGATACGTGCAGGGCATGACCA TCCTCTGCGCGCCGCTGCTCTTCGTCATGCCCGAAGTCGACGCCTTCTTT TGCTTCCATGCGCTGCTGACCCGCCACATCCCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5314:2..934-

>mRNA_P-wetherbeei_contig5314.1.1 ID=mRNA_P-wetherbeei_contig5314.1.1|Name=mRNA_P-wetherbeei_contig5314.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=561bp|location=Sequence derived from alignment at P-wetherbeei_contig5314:2..934- (Phaeothamnion wetherbeei SAG_119_79)
AACAAGGCCCTGCGGGAAGAGTACCTCGCCCTGCTGCAGCGGCGAGACGG
CGACGCCGCCGCGCCGGCCGGCGAGCGCGTCAAGGCGCTGCGGCGCATGG
TGCTGTTGCAGGGCCTGCCGACCGAGACGGAGCCCGCCGGCGGCGACGAC
TCGTGCTCGCTCCGCGGCCTCATCTGGAAGCTTCTTCTCGGCGCCATGCA
CATCGACGCCATGCTCTACATCCGGCTGGTGGAGCAGGGCGCCAGCTGGA
GCGACTGGAAGATCCGTGACGACACCTTTCGCACGTTGCGCGGCGACGAA
GAGTTCCAGCGGCGGGTGCCCGAGGACAAGCTCAGCCGCCTCAACAATGC
CTTTGTGAGACTAAACTTTCCAGACGTGGACGGGCTGCCAGCCACCCCGG
GGCTCCCAGTGCGGATGGCGGCGGCAGAGGCGCTGGTGGGACTGGGCAGC
TACGGCGGATACGTGCAGGGCATGACCATCCTCTGCGCGCCGCTGCTCTT
CGTCATGCCCGAAGTCGACGCCTTCTTTTGCTTCCATGCGCTGCTGACCC
GCCACATCCCC
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