mRNA_P-wetherbeei_contig5310.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5310.4.1
Unique NamemRNA_P-wetherbeei_contig5310.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5310.4.1 vs. uniprot
Match: D8LBE2_ECTSI (Non ribosomal peptide synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBE2_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 8.970e-113
Identity = 182/270 (67.41%), Postives = 204/270 (75.56%), Query Frame = 1
Query:   13 LEGKVAVVTGASSGIGEAIAIALAREGASVALGARRLEELQRVGNTIEAD--GGKVFVQVTDVVDRAQVKALANATEAGNRLHTLPTPLRHDTTALGPIDIWVNNAGVMYFTKMKNLHEDEWERMIDVNCKGVVNGIGAALGSGMVARGGGHIVTISSDAGRRVFPQLAVYCGTKYFVEATSEGLRRELVGTGVRVTTIQPGDVATDLVMHNTDAEAAADSGVQIGQKVGVGLTQNQVLKPEDVAAAVLYTVTAPPHVAVNEVLVEPRDQ 816
            L GKV VVTG+S GIG AIA  LA  GA+V LGARR+EEL++V   IEA+  G +V V   DV  R +VKAL  A EAG                 GP+D+ VNNAGVMYFT MKNLHEDEWER +DVNCKG + GIGA LG GM+ RG GHIV ISSDAGRR+FP LAVYC +KYFVEA SEGLRRE+VGTG++VTTIQPGD ATDLVM+NTD EAA + GV IG KVG G T+ QVL+PEDVAAAVLY VTAP HVAVNEVLVEPRDQ
Sbjct:    3 LSGKVVVVTGSSGGIGAAIASTLASAGANVVLGARRIEELEKVKTKIEAEVGGDRVMVCKVDVTKRDEVKALVAAAEAG----------------FGPVDVMVNNAGVMYFTNMKNLHEDEWERTVDVNCKGTMFGIGAVLG-GMIERGSGHIVNISSDAGRRIFPSLAVYCASKYFVEAMSEGLRREVVGTGLKVTTIQPGDCATDLVMNNTDKEAADEQGVAIGVKVGTGSTETQVLQPEDVAAAVLYAVTAPSHVAVNEVLVEPRDQ 255          
BLAST of mRNA_P-wetherbeei_contig5310.4.1 vs. uniprot
Match: A0A835ZEL1_9STRA (Non ribosomal peptide synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEL1_9STRA)

HSP 1 Score: 305 bits (782), Expect = 1.630e-101
Identity = 170/270 (62.96%), Postives = 194/270 (71.85%), Query Frame = 1
Query:   13 LEGKVAVVTGASSGIGEAIAIALAREGASVALGARRLEELQRVGNTIEAD--GGKVFVQVTDVVDRAQVKALANATEAGNRLHTLPTPLRHDTTALGPIDIWVNNAGVMYFTKMKNLHEDEWERMIDVNCKGVVNGIGAALGSGMVARGGGHIVTISSDAGRRVFPQLAVYCGTKYFVEATSEGLRRELVGTGVRVTTIQPGDVATDLVMHNTDAEAAADSGVQIGQKVGVGLTQNQVLKPEDVAAAVLYTVTAPPHVAVNEVLVEPRDQ 816
            L+GKVA VTGAS GIGEAIA+ALA  GA VA+ ARR ++L RV   IE+   G  V V  TDV  R++VK   +A EA                ALGP+DI VNNAGVMYFT M +L EDEWE M+DVNCKGV+NG+GA L  GM+ RG GHIV ISSDAGRRVFP LAVY GTK+FVEA SEGLRRE+VGTGVRVTTIQPGDV+TDLV++NTDA  AA            G   N VL+P DVA AVLY VTAPPHVAVNE+++EPRDQ
Sbjct:    4 LQGKVACVTGASGGIGEAIALALAGAGAKVAICARREDQLARVKANIESQVQGCNVLVHTTDVTRRSEVKGFVSAAEA----------------ALGPVDIMVNNAGVMYFTHMAHLREDEWEHMVDVNCKGVMNGVGAVL-KGMIDRGSGHIVNISSDAGRRVFPALAVYSGTKFFVEALSEGLRREVVGTGVRVTTIQPGDVSTDLVVNNTDAATAAXXXXXXXXXXXXGADVNAVLQPSDVAGAVLYAVTAPPHVAVNEIMIEPRDQ 256          
BLAST of mRNA_P-wetherbeei_contig5310.4.1 vs. uniprot
Match: A0A7S0WXH8_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WXH8_9CHLO)

HSP 1 Score: 302 bits (774), Expect = 2.490e-100
Identity = 162/270 (60.00%), Postives = 195/270 (72.22%), Query Frame = 1
Query:    7 GRLEGKVAVVTGASSGIGEAIAIALAREGASVALGARRLEELQRVGNTIEADGGKVFVQVTDVVDRAQVKALANATEAGNRLHTLPTPLRHDTTALGPIDIWVNNAGVMYFTKMKNLHEDEWERMIDVNCKGVVNGIGAALGSGMVARGGGHIVTISSDAGRRVFPQLAVYCGTKYFVEATSEGLRRELVGTGVRVTTIQPGDVATDLVMHNTDAEAAADSGVQIGQKVGVGLTQNQVLKPEDVAAAVLYTVTAPPHVAVNEVLVEPRDQ 816
            GRL+GKVAV+TG SSGIG  IA  LA EG +VAL ARR+E+L+ V  +I + GGK     TDV  RA V+AL  A E                 +LGP+DI VN AGVMYFT MKNLHEDEWER +D+NCKGV+NG+ A L  GMV R  GHI+ ISSDAGR VFP L VY  TK+FV A S+GLR+EL+GT V+VT IQPGDVATDL+M NTD EAA   GV IGQKVG GL ++QVL  ED+A+AV+Y VTAP HV ++E+++EP+DQ
Sbjct:    2 GRLDGKVAVITGGSSGIGAGIARGLAAEGCAVALAARRVEKLKEVEESITSKGGKAISVATDVTKRADVRALVKAAE----------------DSLGPVDILVNCAGVMYFTLMKNLHEDEWERQVDINCKGVLNGVAAVL-DGMVKRDAGHIINISSDAGRDVFPSLTVYSATKHFVWAISKGLRKELIGTKVKVTDIQPGDVATDLIMENTDKEAADALGVAIGQKVGTGLKRSQVLDVEDIASAVVYAVTAPAHVGIHELMIEPKDQ 254          
BLAST of mRNA_P-wetherbeei_contig5310.4.1 vs. uniprot
Match: UPI0001CBBBDA (dehydrogenase/reductase SDR family member 11-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBBBDA)

HSP 1 Score: 264 bits (675), Expect = 2.360e-85
Identity = 146/267 (54.68%), Postives = 184/267 (68.91%), Query Frame = 1
Query:   13 LEGKVAVVTGASSGIGEAIAIALAREGASVALGARRLEELQRVGNTIEADGGKVFVQVTDVVDRAQVKALANATEAGNRLHTLPTPLRHDTTALGPIDIWVNNAGVMYFTKMKNLHEDEWERMIDVNCKGVVNGIGAALGSGMVARGGGHIVTISSDAGRRVFPQLAVYCGTKYFVEATSEGLRRELVGTGVRVTTIQPGDVATDLVMHNTDAEAAADSGVQIGQKVGVGLTQNQVLKPEDVAAAVLYTVTAPPHVAVNEVLVEPRD 813
            L G VA+VTGASSGIG A+A  LA  GA VA+ ARR+++L  +  +IE  GG      TDV ++ +VKAL                ++H  + LGP+DI VNNAGVMY+T MKNL+ED+WER IDVNCKGVVNG+GA L SGM++RG GHIV +SS+AGRR FP LAVY GTK+FVEA S  LR+EL+GTGV+VTTIQPGDV TDL   NTD EA         +K  +  T +  L+  D+  AV+Y V+ PP+V VNE+L+EPR+
Sbjct:    8 LAGSVAIVTGASSGIGAAVAKHLAEAGAMVAMAARRVDKLNEIQESIEKGGGVAIAVKTDVCNKDEVKAL----------------VKHTESTLGPVDIIVNNAGVMYYTLMKNLNEDQWERTIDVNCKGVVNGVGAVL-SGMISRGKGHIVNMSSNAGRRAFPGLAVYSGTKFFVEAMSSALRQELIGTGVKVTTIQPGDVKTDLAAENTDKEAI--------EKYDMSSTYD-TLQAADIGRAVVYAVSQPPYVGVNEILIEPRE 248          
BLAST of mRNA_P-wetherbeei_contig5310.4.1 vs. uniprot
Match: UPI001425B0BC (uncharacterized oxidoreductase SSP1627-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425B0BC)

HSP 1 Score: 262 bits (669), Expect = 1.920e-84
Identity = 147/266 (55.26%), Postives = 180/266 (67.67%), Query Frame = 1
Query:   13 LEGKVAVVTGASSGIGEAIAIALAREGASVALGARRLEELQRVGNTIEADGGKVFVQVTDVVDRAQVKALANATEAGNRLHTLPTPLRHDTTALGPIDIWVNNAGVMYFTKMKNLHEDEWERMIDVNCKGVVNGIGAALGSGMVARGGGHIVTISSDAGRRVFPQLAVYCGTKYFVEATSEGLRRELVGTGVRVTTIQPGDVATDLVMHNTDAEAAADSGVQIGQKVGVGLTQNQVLKPEDVAAAVLYTVTAPPHVAVNEVLVEPR 810
            L G+VA+VTGASSGIG AIA  LA  GASVA+ ARR E+L ++ + IEA+ G VFV  TDV  R  VK L   TE                  LGP+DI VNNAG+MY+T M+++ ED+WER ID+NCKGV+NGIGA L +GM+ R  GHIV +SS+AGR  FP LAVY GTKYFVE  S  LR+E+ GTGV++T IQPGDV T+L+ H TD EA A+     G+KV         L P DVA AV+Y V+ P HVAVNE+L+EPR
Sbjct:    8 LLGQVAIVTGASSGIGAAIATHLASAGASVAIAARREEKLNQLRDEIEANNGTVFVMKTDVAKREDVKRLVAETEK----------------QLGPVDILVNNAGIMYYTYMRSIQEDQWERTIDINCKGVMNGIGAVL-NGMLERKKGHIVNMSSNAGRASFPGLAVYTGTKYFVEGVSSSLRKEIAGTGVKITCIQPGDVTTELIAHTTDQEAKAEYADGSGEKV---------LDPSDVARAVVYAVSQPSHVAVNEILIEPR 247          
BLAST of mRNA_P-wetherbeei_contig5310.4.1 vs. uniprot
Match: A0A6J4RDF8_9ACTN (3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=uncultured Rubrobacteraceae bacterium TaxID=349277 RepID=A0A6J4RDF8_9ACTN)

HSP 1 Score: 258 bits (659), Expect = 6.080e-83
Identity = 152/270 (56.30%), Postives = 184/270 (68.15%), Query Frame = 1
Query:   13 LEGKVAVVTGASSGIGEAIAIALAREGASVALGARRLEELQRVGNTIEADGGKV--FVQVTDVVDRAQVKALANATEAGNRLHTLPTPLRHDTTALGPIDIWVNNAGVMYFTKMKNLHEDEWERMIDVNCKGVVNGIGAALGSGMVARGGGHIVTISSDAGRRVFPQLAVYCGTKYFVEATSEGLRRELVGTGVRVTTIQPGDVATDLVMHNTDAEAAADSGVQIGQKVGVGLTQNQVLKPEDVAAAVLYTVTAPPHVAVNEVLVEPRDQ 816
            L+G+VAVVTGASSGIG A+A ALAREGA VAL ARR + L  V   +E  GG V   V  TDV DR QVKAL    E                  LGP++I VN AG+MY+T M+NL EDEWER ++VNCKG +N +GA L  GM+ARG GH+VTISSDAGR+VFP L+VY  +K+FVEA S+GLR E  GTG++VTTIQPG+VATDL   +TD EA    G Q G+         +VL PEDVAA+V+Y +  P H AVNE+LVEPRD+
Sbjct:    6 LQGRVAVVTGASSGIGAAVARALAREGAHVALAARRRDVLLDVQAGLEEPGGMVRSLVAATDVTDREQVKALVERAEG----------------ELGPVEILVNCAGIMYYTLMRNLREDEWERTVEVNCKGALNCVGAVL-PGMLARGRGHVVTISSDAGRKVFPGLSVYSASKFFVEALSQGLRLETAGTGIKVTTIQPGNVATDLSSLSTDVEALELYG-QPGEA--------RVLDPEDVAASVVYALRQPDHAAVNEILVEPRDE 249          
BLAST of mRNA_P-wetherbeei_contig5310.4.1 vs. uniprot
Match: UPI001E1D6DDB (uncharacterized oxidoreductase SAR2567-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D6DDB)

HSP 1 Score: 255 bits (652), Expect = 7.470e-82
Identity = 141/267 (52.81%), Postives = 175/267 (65.54%), Query Frame = 1
Query:   13 LEGKVAVVTGASSGIGEAIAIALAREGASVALGARRLEELQRVGNTIEADGGKVFVQVTDVVDRAQVKALANATEAGNRLHTLPTPLRHDTTALGPIDIWVNNAGVMYFTKMKNLHEDEWERMIDVNCKGVVNGIGAALGSGMVARGGGHIVTISSDAGRRVFPQLAVYCGTKYFVEATSEGLRRELVGTGVRVTTIQPGDVATDLVMHNTDAEAAADSGVQIGQKVGVGLTQNQVLKPEDVAAAVLYTVTAPPHVAVNEVLVEPRD 813
            L  KVA+VTGASSG+G A+A+ALA +GA VA+ ARR++ LQ V + I   GG      TDV  RA+VK L                +RH    LGP+DI VNNAG MY+T MKN+HEDEWE+ +DVN KG  N IGA L  GMV RG GHIV +SSDAGRR +  LAVY GTK++VE  S+ +R EL+GTG+RVT IQPGDV T+L  H TD EA     V           + ++L+PEDVA AV+Y V+ P HV VNE+L+EPR+
Sbjct:   10 LRDKVAIVTGASSGLGRAVAVALAGKGAKVAMAARRMDRLQEVESVIANSGGVSISVKTDVTQRAEVKEL----------------VRHTEKTLGPVDILVNNAGTMYYTLMKNVHEDEWEKTVDVNIKGFNNSIGAVL-DGMVKRGKGHIVNMSSDAGRRGYLGLAVYSGTKFYVEGLSQAMRNELIGTGIRVTCIQPGDVTTELFQHTTDTEAKEKYDVH---------EKTKILEPEDVANAVVYAVSQPGHVGVNEILIEPRE 250          
BLAST of mRNA_P-wetherbeei_contig5310.4.1 vs. uniprot
Match: A0A6G8PWI7_9ACTN (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Rubrobacter marinus TaxID=2653852 RepID=A0A6G8PWI7_9ACTN)

HSP 1 Score: 251 bits (640), Expect = 6.160e-80
Identity = 147/270 (54.44%), Postives = 177/270 (65.56%), Query Frame = 1
Query:    7 GRLEGKVAVVTGASSGIGEAIAIALAREGASVALGARRLEELQRVGNTIEADGGKVFVQVTDVVDRAQVKALANATEAGNRLHTLPTPLRHDTTALGPIDIWVNNAGVMYFTKMKNLHEDEWERMIDVNCKGVVNGIGAALGSGMVARGGGHIVTISSDAGRRVFPQLAVYCGTKYFVEATSEGLRRELVGTGVRVTTIQPGDVATDLVMHNTDAEAAADSGVQIGQKVGVGLTQNQVLKPEDVAAAVLYTVTAPPHVAVNEVLVEPRDQ 816
            GRL GKVAVVTGASSGIG A+A ALA EGA VAL ARR + L+ V   +    G +  + TDV DR  V+AL    E                  LGP+D  VN AGVMY+T MKNL E+EWE  ++VNCKG +N +GA L  GM++RGGGHIVTISSDAGR+V+P LAVY  +K+FVEA S+GLR E  GTGVRVTT+QPG+V T L   + D EA    G   G +V         L PEDVAA+VLY +  P HVAVNE+LV+PRD+
Sbjct:   16 GRLGGKVAVVTGASSGIGAAVAGALAAEGAGVALAARRADALREVQAGLVEGAGSI-AEATDVTDREGVRALVARAER----------------ELGPVDFLVNCAGVMYYTLMKNLREEEWEGTVEVNCKGTLNCVGAVL-PGMLSRGGGHIVTISSDAGRKVYPGLAVYSASKFFVEALSQGLRLETAGTGVRVTTVQPGNVDTGLASLSNDEEAIQSYGEPTGARV---------LDPEDVAASVLYALAQPDHVAVNEILVQPRDE 258          
BLAST of mRNA_P-wetherbeei_contig5310.4.1 vs. uniprot
Match: A0A510HGT1_9ACTN (Oxidoreductase n=1 Tax=Rubrobacter xylanophilus TaxID=49319 RepID=A0A510HGT1_9ACTN)

HSP 1 Score: 248 bits (634), Expect = 3.160e-79
Identity = 147/272 (54.04%), Postives = 180/272 (66.18%), Query Frame = 1
Query:    1 MAGRLEGKVAVVTGASSGIGEAIAIALAREGASVALGARRLEELQRVGNTIEADGGKVFVQVTDVVDRAQVKALANATEAGNRLHTLPTPLRHDTTALGPIDIWVNNAGVMYFTKMKNLHEDEWERMIDVNCKGVVNGIGAALGSGMVARGGGHIVTISSDAGRRVFPQLAVYCGTKYFVEATSEGLRRELVGTGVRVTTIQPGDVATDLVMHNTDAEAAADSGVQIGQKVGVGLTQNQVLKPEDVAAAVLYTVTAPPHVAVNEVLVEPRDQ 816
            M+GRL  ++AVVTGASSGIG A+  ALAREGA VAL ARR E L+ V   +E  G K     TDV DR QV+ L    E                  LGP+D  VN AGVMY+T M+NL  +EWER ++VNCKGV+N +GA LG GMV RG GHIVTISSDAGR+VFP LAVY  +K+FVE  S+GLR E  GTG++VTT+QPG+V T L+  ++D EA    G   G +V         L PEDVAA+V++ +T P HVAVNE+LVEPRD+
Sbjct:    1 MSGRLAERIAVVTGASSGIGAAVCRALAREGARVALAARREEALRSVEEGLE--GTKSVAVPTDVTDREQVERLVRRAE----------------DELGPVDALVNCAGVMYYTLMRNLRTEEWERTVEVNCKGVLNCVGAVLG-GMVERGRGHIVTISSDAGRKVFPGLAVYSASKFFVEGLSQGLRLETAGTGIKVTTVQPGNVDTGLLGMSSDREALERYGKPSGARV---------LDPEDVAASVVHALTQPEHVAVNEILVEPRDE 244          
BLAST of mRNA_P-wetherbeei_contig5310.4.1 vs. uniprot
Match: A0A6G8Q6J5_9ACTN (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Rubrobacter tropicus TaxID=2653851 RepID=A0A6G8Q6J5_9ACTN)

HSP 1 Score: 248 bits (634), Expect = 3.270e-79
Identity = 149/272 (54.78%), Postives = 178/272 (65.44%), Query Frame = 1
Query:    1 MAGRLEGKVAVVTGASSGIGEAIAIALAREGASVALGARRLEELQRVGNTIEADGGKVFVQVTDVVDRAQVKALANATEAGNRLHTLPTPLRHDTTALGPIDIWVNNAGVMYFTKMKNLHEDEWERMIDVNCKGVVNGIGAALGSGMVARGGGHIVTISSDAGRRVFPQLAVYCGTKYFVEATSEGLRRELVGTGVRVTTIQPGDVATDLVMHNTDAEAAADSGVQIGQKVGVGLTQNQVLKPEDVAAAVLYTVTAPPHVAVNEVLVEPRDQ 816
            M+  L G+V VVTGASSGIG A+  ALA  GA VAL ARR E L+ V   +  DG +  V   DV DR  V+ L    E                  LGP+D  VN AGVMYFT MKN+ E+EW+R +DVNCKG VN +GA L  GM+ RG GHIVTISSDAGRRVFP LAVY  +K+FVEA S+GLR E  GTGV+VTTIQPG+VATDL+  + D EA      Q GQ  G      +VL PEDVAA+++Y ++ P HVAVNE+LVEPRD+
Sbjct:    1 MSEALRGRVVVVTGASSGIGAAVGRALADAGAKVALAARREEALREVRAGL-GDGAETLVFPADVTDRGLVRKLVGRVEQD----------------LGPVDALVNCAGVMYFTLMKNVREEEWDRTVDVNCKGTVNCVGAVL-PGMLERGRGHIVTISSDAGRRVFPGLAVYSASKFFVEALSQGLRLETAGTGVKVTTIQPGNVATDLLELSGDEEALQ----QYGQPTGA-----RVLDPEDVAASIVYALSQPDHVAVNEILVEPRDE 245          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5310.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBE2_ECTSI8.970e-11367.41Non ribosomal peptide synthase n=2 Tax=Ectocarpus ... [more]
A0A835ZEL1_9STRA1.630e-10162.96Non ribosomal peptide synthase n=1 Tax=Tribonema m... [more]
A0A7S0WXH8_9CHLO2.490e-10060.00Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
UPI0001CBBBDA2.360e-8554.68dehydrogenase/reductase SDR family member 11-like ... [more]
UPI001425B0BC1.920e-8455.26uncharacterized oxidoreductase SSP1627-like n=1 Ta... [more]
A0A6J4RDF8_9ACTN6.080e-8356.303-oxoacyl-[acyl-carrier protein] reductase n=1 Tax... [more]
UPI001E1D6DDB7.470e-8252.81uncharacterized oxidoreductase SAR2567-like n=1 Ta... [more]
A0A6G8PWI7_9ACTN6.160e-8054.44SDR family NAD(P)-dependent oxidoreductase n=1 Tax... [more]
A0A510HGT1_9ACTN3.160e-7954.04Oxidoreductase n=1 Tax=Rubrobacter xylanophilus Ta... [more]
A0A6G8Q6J5_9ACTN3.270e-7954.78SDR family NAD(P)-dependent oxidoreductase n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5310contigP-wetherbeei_contig5310:2702..3669 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LBE2
PFAMsAMP-binding,AMP-binding_C,NAD_binding_4,PP-binding,adh_short
Model size822
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.47e-113
EggNOG OGsCOG1028@1|root,KOG1205@2759|Eukaryota
Ec32 ortholog descriptionDehydrogenase/reductase
Ec32 orthologEc-27_004280.1
Descriptionoxidation-reduction process
Cds size822
COG categoryIQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186795.2845225-CDS-P-wetherbeei_contig5310:2701..32781683186795.2845225-CDS-P-wetherbeei_contig5310:2701..3278Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5310 2702..3278 -
1683186795.2963853-CDS-P-wetherbeei_contig5310:3424..36691683186795.2963853-CDS-P-wetherbeei_contig5310:3424..3669Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5310 3425..3669 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5310.4.1prot_P-wetherbeei_contig5310.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5310 2702..3669 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5310.4.1

>prot_P-wetherbeei_contig5310.4.1 ID=prot_P-wetherbeei_contig5310.4.1|Name=mRNA_P-wetherbeei_contig5310.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=274bp
MAGRLEGKVAVVTGASSGIGEAIAIALAREGASVALGARRLEELQRVGNT
IEADGGKVFVQVTDVVDRAQVKALANATEAGNRLHTLPTPLRHDTTALGP
IDIWVNNAGVMYFTKMKNLHEDEWERMIDVNCKGVVNGIGAALGSGMVAR
GGGHIVTISSDAGRRVFPQLAVYCGTKYFVEATSEGLRRELVGTGVRVTT
IQPGDVATDLVMHNTDAEAAADSGVQIGQKVGVGLTQNQVLKPEDVAAAV
LYTVTAPPHVAVNEVLVEPRDQG*
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mRNA from alignment at P-wetherbeei_contig5310:2702..3669-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5310.4.1 ID=mRNA_P-wetherbeei_contig5310.4.1|Name=mRNA_P-wetherbeei_contig5310.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=968bp|location=Sequence derived from alignment at P-wetherbeei_contig5310:2702..3669- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAGGCCGATTGGAAGGCAAGGTGGCCGTGGTGACCGGCGCGTCCTC GGGGATCGGAGAGGCGATCGCCATCGCCTTGGCGAGAGAAGGGGCGAGCG TCGCGCTCGGAGCGCGGAGGCTCGAGGAGCTGCAGCGCGTCGGGAACACC ATTGAGGCCGACGGCGGCAAAGTCTTTGTGCAAGTGACCGATGTCGTCGA TCGTGCGCAGGTCAAGGCGCTGGCGAACGCAACCGAGGCCGGCAAGTTGC AAAAAGGCTTGGTAGTATTTTTCATCCTTTTAGCCAGCGCTTTCGCCGAT TCGCAAAGAGTCTATCAGAACTGCTGCTTCCAGCGTGCCCATGAGTATTT CCATACCCATTTCCATTTCCACCTCTCGTCCCCTTTTCCAGCCGACTTCA CACACTTCCAACCCCTCTCCGACACGATACTACAGCCCTGGGACCGATCG ACATCTGGGTAAACAACGCGGGCGTAATGTACTTCACAAAAATGAAGAAC CTGCACGAGGACGAGTGGGAGCGGATGATCGACGTCAACTGCAAAGGCGT TGTCAACGGCATCGGCGCAGCCCTCGGCAGCGGCATGGTCGCCCGCGGCG GCGGCCACATCGTCACTATCTCCTCCGACGCCGGCCGCCGCGTCTTCCCG CAGCTCGCCGTCTACTGCGGCACCAAATACTTTGTCGAGGCGACCTCGGA GGGTTTGCGGCGCGAGCTGGTCGGCACTGGCGTCCGCGTCACCACCATCC AGCCGGGGGACGTCGCGACGGATCTCGTGATGCACAACACGGATGCCGAG GCCGCCGCGGACTCGGGCGTGCAAATAGGGCAAAAGGTCGGGGTCGGCTT AACGCAGAACCAGGTTTTGAAGCCCGAGGATGTGGCGGCGGCGGTGCTCT ACACCGTGACGGCGCCGCCGCACGTGGCCGTCAACGAGGTGCTCGTCGAG CCGCGCGACCAGGGTTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5310:2702..3669-

>mRNA_P-wetherbeei_contig5310.4.1 ID=mRNA_P-wetherbeei_contig5310.4.1|Name=mRNA_P-wetherbeei_contig5310.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=822bp|location=Sequence derived from alignment at P-wetherbeei_contig5310:2702..3669- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAGGCCGATTGGAAGGCAAGGTGGCCGTGGTGACCGGCGCGTCCTC
GGGGATCGGAGAGGCGATCGCCATCGCCTTGGCGAGAGAAGGGGCGAGCG
TCGCGCTCGGAGCGCGGAGGCTCGAGGAGCTGCAGCGCGTCGGGAACACC
ATTGAGGCCGACGGCGGCAAAGTCTTTGTGCAAGTGACCGATGTCGTCGA
TCGTGCGCAGGTCAAGGCGCTGGCGAACGCAACCGAGGCCGGCAACCGAC
TTCACACACTTCCAACCCCTCTCCGACACGATACTACAGCCCTGGGACCG
ATCGACATCTGGGTAAACAACGCGGGCGTAATGTACTTCACAAAAATGAA
GAACCTGCACGAGGACGAGTGGGAGCGGATGATCGACGTCAACTGCAAAG
GCGTTGTCAACGGCATCGGCGCAGCCCTCGGCAGCGGCATGGTCGCCCGC
GGCGGCGGCCACATCGTCACTATCTCCTCCGACGCCGGCCGCCGCGTCTT
CCCGCAGCTCGCCGTCTACTGCGGCACCAAATACTTTGTCGAGGCGACCT
CGGAGGGTTTGCGGCGCGAGCTGGTCGGCACTGGCGTCCGCGTCACCACC
ATCCAGCCGGGGGACGTCGCGACGGATCTCGTGATGCACAACACGGATGC
CGAGGCCGCCGCGGACTCGGGCGTGCAAATAGGGCAAAAGGTCGGGGTCG
GCTTAACGCAGAACCAGGTTTTGAAGCCCGAGGATGTGGCGGCGGCGGTG
CTCTACACCGTGACGGCGCCGCCGCACGTGGCCGTCAACGAGGTGCTCGT
CGAGCCGCGCGACCAGGGTTGA
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