mRNA_P-wetherbeei_contig53084.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53084.1.1 vs. uniprot
Match: UPI00145E392A (hypothetical protein n=1 Tax=Aromatoleum toluvorans TaxID=92002 RepID=UPI00145E392A) HSP 1 Score: 152 bits (384), Expect = 1.680e-44 Identity = 70/126 (55.56%), Postives = 96/126 (76.19%), Query Frame = 1
Query: 1 MTEPKLEGTLARLLRQTAHGRGFLVMCAALAFAGTLTATFPVTAVIVPAALLMPGRWRAITLVSAAGSAIGATVLVIVLHHLGWATIYERFPEMLSHPTWARIMDWAGQYGVIALFFIAISPLPQT 378
M ++E L R+L A G+ L+ C AL+F GT+TA +PVTAV+VPA L+ GRWRAI+ VSA GSAIGATVL++V HHLGW ++ER+PE+++ +WAR++DW +YG +ALF +A+SPLPQT
Sbjct: 1 MLAARIEALLYRILHFAAAGKRLLLACVALSFVGTVTAAWPVTAVVVPATLMAAGRWRAISGVSALGSAIGATVLMLVFHHLGWTQLFERYPELVTDASWARVIDWGARYGTVALFLVALSPLPQT 126
BLAST of mRNA_P-wetherbeei_contig53084.1.1 vs. uniprot
Match: UPI00145D77BE (hypothetical protein n=1 Tax=Aromatoleum petrolei TaxID=76116 RepID=UPI00145D77BE) HSP 1 Score: 150 bits (379), Expect = 9.630e-44 Identity = 72/126 (57.14%), Postives = 93/126 (73.81%), Query Frame = 1
Query: 1 MTEPKLEGTLARLLRQTAHGRGFLVMCAALAFAGTLTATFPVTAVIVPAALLMPGRWRAITLVSAAGSAIGATVLVIVLHHLGWATIYERFPEMLSHPTWARIMDWAGQYGVIALFFIAISPLPQT 378
M ++E + R+LR A G L+ C+AL+F GTLTA +PVTAV+VPA L+ GRWRAI+ V+A GSAIGATVL++V HHLGW +YERFPE+ + P+W + +DW +YG ALF IA SPLPQT
Sbjct: 1 MLVARIEALIYRILRFAAAGHRLLLACSALSFVGTLTAAWPVTAVVVPATLMAAGRWRAISGVAALGSAIGATVLMVVFHHLGWTQLYERFPELATDPSWVQAVDWGKRYGTAALFLIAASPLPQT 126
BLAST of mRNA_P-wetherbeei_contig53084.1.1 vs. uniprot
Match: A0A521HF91_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521HF91_9PROT) HSP 1 Score: 148 bits (373), Expect = 7.590e-43 Identity = 69/122 (56.56%), Postives = 93/122 (76.23%), Query Frame = 1
Query: 13 KLEGTLARLLRQTAHGRGFLVMCAALAFAGTLTATFPVTAVIVPAALLMPGRWRAITLVSAAGSAIGATVLVIVLHHLGWATIYERFPEMLSHPTWARIMDWAGQYGVIALFFIAISPLPQT 378
+++ L R LR G L +C AL+FAGT++A +PVTAV+VPA LL RWR+I++VSA GSA+GA VL++V HHLGW+ ++ERFP++ ++ TW RI+ WA YGVIALF IA+SPLPQT
Sbjct: 5 QIDALLRRALRYATKGHRLLPVCVALSFAGTVSAAYPVTAVVVPATLLAAARWRSISVVSAFGSALGAAVLMVVFHHLGWSQLFERFPQLANNETWIRIVGWAATYGVIALFLIAVSPLPQT 126
BLAST of mRNA_P-wetherbeei_contig53084.1.1 vs. uniprot
Match: A0A1N7AKD2_9RHOO (Uncharacterized protein n=6 Tax=Rhodocyclales TaxID=206389 RepID=A0A1N7AKD2_9RHOO) HSP 1 Score: 148 bits (373), Expect = 7.820e-43 Identity = 72/122 (59.02%), Postives = 90/122 (73.77%), Query Frame = 1
Query: 13 KLEGTLARLLRQTAHGRGFLVMCAALAFAGTLTATFPVTAVIVPAALLMPGRWRAITLVSAAGSAIGATVLVIVLHHLGWATIYERFPEMLSHPTWARIMDWAGQYGVIALFFIAISPLPQT 378
++E L R+LR G L+ C AL+ GTLTA +PVTAV+VPA L+ GRWRAIT VSA GSAIGATVL++V HHLGW +YERFPE+ + +WA+++DW +YG ALF IA SPLPQT
Sbjct: 5 RIEALLYRILRFAEAGHRLLLACVALSLLGTLTAAWPVTAVVVPATLMAAGRWRAITGVSALGSAIGATVLMLVFHHLGWTQLYERFPELATDSSWAQVVDWGQRYGTAALFLIAASPLPQT 126
BLAST of mRNA_P-wetherbeei_contig53084.1.1 vs. uniprot
Match: A0A1G8GTU3_9PSED (Uncharacterized protein n=1 Tax=Pseudomonas panipatensis TaxID=428992 RepID=A0A1G8GTU3_9PSED) HSP 1 Score: 147 bits (371), Expect = 1.200e-42 Identity = 69/123 (56.10%), Postives = 89/123 (72.36%), Query Frame = 1
Query: 10 PKLEGTLARLLRQTAHGRGFLVMCAALAFAGTLTATFPVTAVIVPAALLMPGRWRAITLVSAAGSAIGATVLVIVLHHLGWATIYERFPEMLSHPTWARIMDWAGQYGVIALFFIAISPLPQT 378
P+LEG L LR G +C LA GTL A +P+T+V+VPA LL+P RWR+I + SA GS+ GA L+IV HH+GWA++YERFPE+LS PTW RI+DW YG++ALF +A+SPLPQT
Sbjct: 4 PRLEGALHSALRWAGTGWRLSWLCLGLALLGTLFAAYPITSVVVPAVLLVPRRWRSIAVFSALGSSFGALALMIVSHHMGWASLYERFPELLSDPTWLRIIDWTDSYGLLALFLVAVSPLPQT 126
BLAST of mRNA_P-wetherbeei_contig53084.1.1 vs. uniprot
Match: A0A127MY21_9PSED (SNARE associated Golgi protein n=8 Tax=Proteobacteria TaxID=1224 RepID=A0A127MY21_9PSED) HSP 1 Score: 144 bits (362), Expect = 3.740e-41 Identity = 66/123 (53.66%), Postives = 90/123 (73.17%), Query Frame = 1
Query: 10 PKLEGTLARLLRQTAHGRGFLVMCAALAFAGTLTATFPVTAVIVPAALLMPGRWRAITLVSAAGSAIGATVLVIVLHHLGWATIYERFPEMLSHPTWARIMDWAGQYGVIALFFIAISPLPQT 378
P+LEG L R+LR G +C LA GT TA +P+T+V+VPA L+ P RW I L +A GSA+GA +LVIVLHH+GWA++Y FP++L P+WA++MDW +YG++ALF ++ISPLPQT
Sbjct: 9 PRLEGDLHRILRWAGDGWRMPWLCLGLALLGTCTAAYPITSVVVPAVLVAPRRWGGIALSAALGSALGALLLVIVLHHMGWASLYAHFPQLLQDPSWAQVMDWTRRYGLLALFLVSISPLPQT 131
BLAST of mRNA_P-wetherbeei_contig53084.1.1 vs. uniprot
Match: A0A024HCQ0_PSEKB (Hypothetical membrane protein n=1 Tax=Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13) TaxID=1301098 RepID=A0A024HCQ0_PSEKB) HSP 1 Score: 139 bits (351), Expect = 1.890e-39 Identity = 65/123 (52.85%), Postives = 86/123 (69.92%), Query Frame = 1
Query: 10 PKLEGTLARLLRQTAHGRGFLVMCAALAFAGTLTATFPVTAVIVPAALLMPGRWRAITLVSAAGSAIGATVLVIVLHHLGWATIYERFPEMLSHPTWARIMDWAGQYGVIALFFIAISPLPQT 378
P+LEG L R+LR G +C LA GTL A +P+T+V+VPA LL+P RW I L A GS++GA +L+IV HH+GWA++Y FP+ML PTW R+MDW Y ++ALF ++ISPLPQT
Sbjct: 9 PRLEGVLHRMLRWAGDGWKLPWLCLGLALVGTLFAIYPITSVVVPAVLLVPRRWLGIALFCALGSSLGALLLMIVAHHMGWASLYAHFPQMLQDPTWQRVMDWTHSYHLLALFLVSISPLPQT 131
BLAST of mRNA_P-wetherbeei_contig53084.1.1 vs. uniprot
Match: A0A7X3H5M5_9PSED (Uncharacterized protein n=9 Tax=Pseudomonas TaxID=286 RepID=A0A7X3H5M5_9PSED) HSP 1 Score: 125 bits (314), Expect = 8.260e-34 Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 1
Query: 10 PKLEGTLARLLRQTAHGRGFLVMCAALAFAGTLTATFPVTAVIVPAALLMPGRWRAITLVSAAGSAIGATVLVIVLHHLGWATIYERFPEMLSHPTWARIMDWAGQYGVIALFFIAISPLPQT 378
P+LEG L R+LR G +C LAF TLTA +P+T+V+VPA L+ P RW ++L +A GS+ GA ++++ H+LGW+ +Y FP M + P+W R+M W +YG++ALF +A+ PLPQT
Sbjct: 9 PRLEGYLHRVLRWAGDGWRLPWLCLGLAFVDTLTAAYPITSVVVPAVLMAPRRWGVVSLFAALGSSCGALGMMLIAHYLGWSQLYAWFPAMATDPSWLRVMGWTHEYGLLALFAVALLPLPQT 131
BLAST of mRNA_P-wetherbeei_contig53084.1.1 vs. uniprot
Match: A0A1A8XL03_9PROT (Uncharacterized protein n=1 Tax=Candidatus Accumulibacter aalborgensis TaxID=1860102 RepID=A0A1A8XL03_9PROT) HSP 1 Score: 101 bits (251), Expect = 1.330e-24 Identity = 54/120 (45.00%), Postives = 74/120 (61.67%), Query Frame = 1
Query: 19 EGTLARLLRQTAHGRGFLVMCAALAFAGTLTATFPVTAVIVPAALLMPGRWRAITLVSAAGSAIGATVLVIVLHHLGWATIYERFPEMLSHPTWARIMDWAGQYGVIALFFIAISPLPQT 378
+G LLR AH R + ++ A+AFA T+T +FP AV+VPA LL P RW A+ L+S S GA VLV + HLG A + +PE++ W + DW Q+G++A+ IA SPLPQT
Sbjct: 8 DGLRRLLLRSVAH-RYYSLVVTAIAFAATITFSFPFVAVLVPAVLLAPRRWCALGLLSGIASGCGAAVLVEIFQHLGEAFVVSHYPELVHCEAWRLVSDWLQQWGLVAMLIIAGSPLPQT 126
BLAST of mRNA_P-wetherbeei_contig53084.1.1 vs. uniprot
Match: A0A2R5EDL4_9RHOO (Uncharacterized protein n=1 Tax=Azospira sp. I13 TaxID=1765050 RepID=A0A2R5EDL4_9RHOO) HSP 1 Score: 99.4 bits (246), Expect = 8.550e-24 Identity = 56/123 (45.53%), Postives = 74/123 (60.16%), Query Frame = 1
Query: 10 PKLEGTLARLLRQTAHGRGFLVMCAALAFAGTLTATFPVTAVIVPAALLMPGRWRAITLVSAAGSAIGATVLVIVLHHLGWATIYERFPEMLSHPTWARIMDWAGQYGVIALFFIAISPLPQT 378
P+L LAR L A F + A LAFA T+T +FP + +++ A LL P RW A++L S S +GA VL+ V HHLGW I R+PE++ AR+ W ++GV AL IA SPLPQT
Sbjct: 11 PRLPPWLARYLGDHARHPLFPLFVAGLAFACTVTFSFPFSLILISATLLAPRRWLALSLCSGLASGLGAMVLLEVFHHLGWQQIALRWPELVQAEALARVSHWVAEWGVWALGAIAASPLPQT 133 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53084.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53084.1.1 >prot_P-wetherbeei_contig53084.1.1 ID=prot_P-wetherbeei_contig53084.1.1|Name=mRNA_P-wetherbeei_contig53084.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=126bp MTEPKLEGTLARLLRQTAHGRGFLVMCAALAFAGTLTATFPVTAVIVPAAback to top mRNA from alignment at P-wetherbeei_contig53084:3..380- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53084.1.1 ID=mRNA_P-wetherbeei_contig53084.1.1|Name=mRNA_P-wetherbeei_contig53084.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=378bp|location=Sequence derived from alignment at P-wetherbeei_contig53084:3..380- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53084:3..380- >mRNA_P-wetherbeei_contig53084.1.1 ID=mRNA_P-wetherbeei_contig53084.1.1|Name=mRNA_P-wetherbeei_contig53084.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=378bp|location=Sequence derived from alignment at P-wetherbeei_contig53084:3..380- (Phaeothamnion wetherbeei SAG_119_79)back to top |