mRNA_P-wetherbeei_contig53062.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig53062.1.1
Unique NamemRNA_P-wetherbeei_contig53062.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig53062.1.1 vs. uniprot
Match: A0A2V9UNS4_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9UNS4_9BACT)

HSP 1 Score: 64.7 bits (156), Expect = 4.750e-9
Identity = 48/155 (30.97%), Postives = 75/155 (48.39%), Query Frame = 1
Query:   55 EPAQSLNLGRFYLIVVCFVLAY-ADWMPGQSVFEWTPGTLDMADWKATGPSWVAVAVLCFTLILPARPRETLLLAVVATSTSPLAWLISRNLYTSQPAN-SELLVFFILQYVVCLMAWAQSFVFVRFISNLEAPSRVGPYKLVGLLGAGGMGQVW 513
            +P   LNLG+ YL+V  F L     W   Q   +W    +          SW+   VL    I+P  P +TL+  ++A S +PLA LI++   +    + + ++V     Y++  +A   S V +R    +     +G Y+LV LLG GGMG+VW
Sbjct:  105 DPGMILNLGQVYLVVTAFALGMMTHWF--QVPKDWPVSPMI---------SWIGAVVLMSAAIVPNSPMKTLIAGLIAVSMNPLAMLIAKARGSWDFGSWTNVMVMHYPDYLMVGVAVVISRVVMRLGQQVSKAREMGSYRLVALLGRGGMGEVW 248          
BLAST of mRNA_P-wetherbeei_contig53062.1.1 vs. uniprot
Match: A0A7Y2B0M0_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y2B0M0_9BACT)

HSP 1 Score: 63.9 bits (154), Expect = 8.680e-9
Identity = 51/163 (31.29%), Postives = 84/163 (51.53%), Query Frame = 1
Query:   40 LTRR-LEPAQSLNLGRFYLIVVCFVLAYADWMPGQSVFEWTPGTLDMADWKATGPSWVAVAVLCFTLILPARPRETLLLAVVATSTSPLAWLISRNLYTSQPANSELLVFFILQYVVCLMAWAQSFVFVRFI----SNLEAPSRVGPYKLVGLLGAGGMGQVW 513
            LTR  L P   L +G FY +V CF +A A++  G S+        D   +   G SWVAV ++ F +++PA PR  LL A+ + +T P A L+  +L++       ++   +   ++  +    +++  R +    + L     +G Y+LV LLG GGMG+VW
Sbjct:   94 LTRSSLAPTTILGIGLFYQVVFCFGVAMAEYW-GTSL------ATDQIHYL--GLSWVAVCMIFFAVVIPATPRNALLTALASGATVP-AVLVLSSLFSGATIALSVMQIIVRGAMLYGLIAGLAYMGARSVYMLGTELGKAREIGSYRLVELLGKGGMGEVW 246          
BLAST of mRNA_P-wetherbeei_contig53062.1.1 vs. uniprot
Match: A0A7W0WMT9_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A7W0WMT9_9BACT)

HSP 1 Score: 63.9 bits (154), Expect = 8.720e-9
Identity = 46/166 (27.71%), Postives = 82/166 (49.40%), Query Frame = 1
Query:   22 STFVYYLTRRL--EPAQSLNLGRFYLIVVCFVLAYADWMPGQSVFEWTPGTLDMADWKATGPSWVAVAVLCFTLILPARPRETLLLAVVATSTSPLAWLISRNLYTSQPANSELLVFFILQYVVCLMAWAQSFVFVRFISNLEAPSRVGPYKLVGLLGAGGMGQVW 513
            S ++++ TRRL   P  +L+L   Y +V+   +   +      +     G L          SW+ V +L F +I+P  PR+TL+ +++A S  P   L++       P    L+  ++  YV  ++A   S + +R   +++    +G Y+LV L+G GGMG+VW
Sbjct:   89 SAWLWWYTRRLTCRPRLALDLALVYQVVLALGIGIVNQTEPHRLLA---GRL----------SWLCVLILLFPMIVPNTPRKTLIASLIAASMDPFGILVAHWRGLEIPGFDLLMWNYLPNYVCAIIAVIPSKIMLRIGRHVQRARELGSYRLVHLIGRGGMGEVW 241          
BLAST of mRNA_P-wetherbeei_contig53062.1.1 vs. uniprot
Match: A0A0S7ZV92_9BACT (Protein kinase domain-containing protein (Fragment) n=1 Tax=Gemmatimonas sp. SG8_17 TaxID=1703355 RepID=A0A0S7ZV92_9BACT)

HSP 1 Score: 60.8 bits (146), Expect = 7.630e-8
Identity = 46/157 (29.30%), Postives = 75/157 (47.77%), Query Frame = 1
Query:   49 RLEPAQSLNLGRFYLIV--VCFVLAYADWMPGQSVFEWTPGTLDMADWKATGPSWVAVAVLCFTLILPARPRETLLLAVVATSTSPLAWLISRNLYTSQPANSELLVFFILQYVVCLMAWAQSFVFVRFISNLEAPSRVGPYKLVGLLGAGGMGQVW 513
            +L+  + L+LG  Y +V  +   +    W       EW  GT      +A   SW  V ++ F L++P+ P +TL+ A+ A S  PL + I+ N +        +L   I  Y+   +A   + V      ++    R+G Y+L+ LLG GGMG+VW
Sbjct:   92 KLDCRRILDLGLIYEVVGALGIDIGIVFWR------EWPAGT------EAAPLSWSCVWIVVFPLLVPSTPGKTLIAALAAASVRPLLYFIAVNSHLEPLPVGTVLALTIPGYICAGIAVVGARVVYGLGRDIRRAQRMGSYRLIELLGVGGMGEVW 236          
BLAST of mRNA_P-wetherbeei_contig53062.1.1 vs. uniprot
Match: A0A1F2RZ25_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28 TaxID=1797180 RepID=A0A1F2RZ25_9BACT)

HSP 1 Score: 60.8 bits (146), Expect = 1.000e-7
Identity = 52/163 (31.90%), Postives = 75/163 (46.01%), Query Frame = 1
Query:   43 TRRLEPAQSLNLGRFYLIVVCFVLAYADWMPGQSVFEWTPGTLDMADWKATGPSWVAVAVLCFTLILPARPRETLLLAVVATSTSPLAWLISRNLYTSQPAN--SELLVFFILQYVVCLMAWAQSFVFVRFISNLEAP----SRVGPYKLVGLLGAGGMGQVW 513
            +R++ PA  L+LG  + +V  F +A            W  G   +AD    G S + + +  F L++P+   +T+L A       PL  L+S  LY   PA      + FF   ++    A   S    RFI NL         +G YKLV LLG+GGMG+VW
Sbjct:   78 SRKVPPALMLDLGLLFEVVGAFWIAI-----------WEHGIPPLADLPFRGLSGIGLWITFFVLVVPSTLGKTVLAAFTTVLMGPLGLLVS-GLYYGNPAPPVGRWVEFFFSSFLFAAFAIVLS----RFIYNLGCDVTKAREMGSYKLVELLGSGGMGEVW 224          
BLAST of mRNA_P-wetherbeei_contig53062.1.1 vs. uniprot
Match: A0A849Z635_9DELT (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A849Z635_9DELT)

HSP 1 Score: 59.3 bits (142), Expect = 3.260e-7
Identity = 44/154 (28.57%), Postives = 73/154 (47.40%), Query Frame = 1
Query:   64 QSLNLGRFYLIVVCFVLAYA----DWMPGQSVFEWTPGTLDMADWKATGPSWVAVAVLCFTLILPARPRETLLLAVVATSTSPLAWLISRNLYTSQPANSELLVFFILQYVVCLMAWAQSFVFVRFISNLEAPSRVGPYKLVGLLGAGGMGQVW 513
            + L++G  Y + +  +LA       W PG    E +P               VA+ +L F  ++P  PR TLL++++A S  P+   IS       PA ++++          +++   S V      +++A  R+G Y+LV LLG GGMG+VW
Sbjct:   97 RRLDIGFGYEVGIALLLATMRHSIPWAPGDGFREVSP---------------VAILILLFAALIPNPPRRTLLVSLLAASMEPVGLAISIARGNPVPAPAQIMAICAGPLFTAIVSAFISRVIYGLARSVDAARRMGSYRLVALLGKGGMGEVW 235          
BLAST of mRNA_P-wetherbeei_contig53062.1.1 vs. uniprot
Match: A0A2V7PQT1_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2V7PQT1_9BACT)

HSP 1 Score: 59.3 bits (142), Expect = 3.460e-7
Identity = 49/160 (30.63%), Postives = 89/160 (55.62%), Query Frame = 1
Query:   49 RLEPAQSLNLGRFYLIVVCFVLAYADWMPGQSVFEWTPGTLDMADWKATGPSWVAVAVLCFTLILPARPRETLLLAVVATSTSPLAWLISRNLYTSQPANSELLVFFILQ----YVVCL-MAWAQSFVFVRFISNLEAPSRVGPYKLVGLLGAGGMGQVW 513
            RL     LNLG  + +   + +A A ++    +    P  L +       PSWVA+ +L +++++PA P +TL+ A++A++++PL  L S  ++ +  A+   L  F++Q    Y++C+ MA+A + V     +++     +G Y+LV  LG GGMG+VW
Sbjct:  116 RLSWQIKLNLGLAFEVAGSYGIALAQYLVVPEIRN-EPHILHVLS-----PSWVAIWMLFYSIVVPAPPGKTLV-ALIASASAPLVVLWS-TIHAAGLADLMPLPVFLVQHALPYLICVAMAFAGTRVVYNLGTDVARARELGSYRLVERLGRGGMGEVW 267          
BLAST of mRNA_P-wetherbeei_contig53062.1.1 vs. uniprot
Match: A0A538T228_9BACT (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Candidatus Eisenbacteria bacterium TaxID=2212470 RepID=A0A538T228_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 5.960e-7
Identity = 40/109 (36.70%), Postives = 65/109 (59.63%), Query Frame = 1
Query:  199 PSWVAVAVLCFTLILPARPRETLLLAVVATSTSP--LAWLISR-NLYTSQPANSELLVFFILQYVVCL-MAWAQSFVFVRFISNLEAPSRVGPYKLVGLLGAGGMGQVW 513
            PSWVA+ +L + +I+PA PR+T++ A++A++T+P  + W   R N          LLV  +L Y++C  MA A + V     +++     +G Y+L+  LG GGMG+VW
Sbjct:   39 PSWVAIWMLFYAIIVPAPPRKTVV-ALLASATAPAVVIWFSLRANGLADLMPIPMLLVHHVLPYIICAAMAHAGTRVVYNLGADVVRARELGSYRLIERLGRGGMGEVW 146          
BLAST of mRNA_P-wetherbeei_contig53062.1.1 vs. uniprot
Match: A0A538TGJ3_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Eisenbacteria bacterium TaxID=2212470 RepID=A0A538TGJ3_9BACT)

HSP 1 Score: 53.9 bits (128), Expect = 1.630e-5
Identity = 43/160 (26.88%), Postives = 87/160 (54.37%), Query Frame = 1
Query:   49 RLEPAQSLNLGRFYLIVVCFVLAYADWMPGQSVFEWTPGTLDMADWKATGPSWVAVAVLCFTLILPARPRETLLLAVVATSTSPLAWLISRNLYTSQPAN----SELLVFFILQYVVC-LMAWAQSFVFVRFISNLEAPSRVGPYKLVGLLGAGGMGQVW 513
            R+     +N+G  + ++  + +A + ++ G   F  TP         A  PSWVA+ ++ +++++PA+P   L  A++A++++P A +++ +L+ +   +        +  IL Y+ C L+A+A + + V   + +     +G YKL+  LG GGMG+VW
Sbjct:   97 RVPWQVKMNVGLVFEVLGSYGIALSMYL-GAERFASTPIVF-----FALSPSWVAIWMILYSIVVPAQPVRALF-ALLASASAP-AVVMAYSLHHAGLFHIFTPETFFLTHILPYLTCVLLAYASARIMVTLGAEVSRARELGSYKLIERLGQGGMGEVW 248          
BLAST of mRNA_P-wetherbeei_contig53062.1.1 vs. uniprot
Match: A0A6N2D6W5_9DELT (Non-specific serine/threonine protein kinase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A6N2D6W5_9DELT)

HSP 1 Score: 52.4 bits (124), Expect = 8.460e-5
Identity = 40/157 (25.48%), Postives = 73/157 (46.50%), Query Frame = 1
Query:   46 RRLEPAQSLNLGRFYLIVVCFVLAYADWMPGQSVFEW-TPGTLDMADWKATGPSWVAVAVLCFTLILPARPRETLLLAVVATSTSPLAWLISRNLYTSQPANSELLVFFILQYVVCLMAWAQSFVFVRFISNLEAPSRVGPYKLVGLLGAGGMGQVW 513
            RRL     L L    L+  C + ++A  +      E+  PG            +W +V ++ F L++P RPRET++  V+   ++PL  +    +        EL+ + +      ++ +A +    R   +++   ++G Y+LV  LG GGMG+VW
Sbjct:  111 RRLSTQTVLRLSLGGLVAYCGIFSFA--VARTRYLEYGVPGDA----------TWTSVLLVAFPLLVPTRPRETVVALVLGALSAPLGTMWVARVTDLTLTAGELVGYALSPMAAAVIGYAGARFVYRLGLDVQRAEQLGNYRLVRRLGRGGMGEVW 255          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53062.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2V9UNS4_9BACT4.750e-930.97Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7Y2B0M0_9BACT8.680e-931.29Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7W0WMT9_9BACT8.720e-927.71Non-specific serine/threonine protein kinase n=1 T... [more]
A0A0S7ZV92_9BACT7.630e-829.30Protein kinase domain-containing protein (Fragment... [more]
A0A1F2RZ25_9BACT1.000e-731.90Non-specific serine/threonine protein kinase n=1 T... [more]
A0A849Z635_9DELT3.260e-728.57Non-specific serine/threonine protein kinase (Frag... [more]
A0A2V7PQT1_9BACT3.460e-730.63Non-specific serine/threonine protein kinase n=1 T... [more]
A0A538T228_9BACT5.960e-736.70Non-specific serine/threonine protein kinase (Frag... [more]
A0A538TGJ3_9BACT1.630e-526.88Uncharacterized protein (Fragment) n=1 Tax=Candida... [more]
A0A6N2D6W5_9DELT8.460e-525.48Non-specific serine/threonine protein kinase n=1 T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53062contigP-wetherbeei_contig53062:29..541 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog448385.sce0363
PFAMsPkinase
Model size513
Max annot lvl28221|Deltaproteobacteria
Hectar predicted targeting categorysignal anchor
Exons1
Evalue7.42e-06
EggNOG OGsCOG0515@1|root,COG0515@2|Bacteria,1P913@1224|Proteobacteria,4377Q@68525|delta/epsilon subdivisions,2X28Z@28221|Deltaproteobacteria,2YUDY@29|Myxococcales
DescriptionProtein kinase domain
Cds size513
COG categoryKLT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186794.6454086-CDS-P-wetherbeei_contig53062:28..5411683186794.6454086-CDS-P-wetherbeei_contig53062:28..541Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig53062 29..541 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53062.1.1prot_P-wetherbeei_contig53062.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig53062 29..541 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig53062.1.1

>prot_P-wetherbeei_contig53062.1.1 ID=prot_P-wetherbeei_contig53062.1.1|Name=mRNA_P-wetherbeei_contig53062.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp
MVFLFLFSTFVYYLTRRLEPAQSLNLGRFYLIVVCFVLAYADWMPGQSVF
EWTPGTLDMADWKATGPSWVAVAVLCFTLILPARPRETLLLAVVATSTSP
LAWLISRNLYTSQPANSELLVFFILQYVVCLMAWAQSFVFVRFISNLEAP
SRVGPYKLVGLLGAGGMGQVW
back to top

mRNA from alignment at P-wetherbeei_contig53062:29..541+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig53062.1.1 ID=mRNA_P-wetherbeei_contig53062.1.1|Name=mRNA_P-wetherbeei_contig53062.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig53062:29..541+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTCTTTCTTTTCTTGTTCTCGACCTTCGTCTACTACCTGACGCGAAG GCTAGAGCCGGCGCAGTCTCTCAATCTGGGCCGCTTTTATCTGATCGTCG TCTGCTTCGTGCTGGCTTACGCCGACTGGATGCCGGGTCAATCGGTTTTT GAATGGACCCCGGGAACTCTGGATATGGCGGATTGGAAGGCGACAGGGCC TTCCTGGGTAGCTGTCGCGGTTTTGTGCTTCACTTTGATTTTGCCGGCGC GGCCGCGAGAGACTCTGCTGTTGGCGGTCGTGGCTACCTCCACGAGCCCG TTGGCCTGGCTGATCTCTCGCAATCTCTACACCAGCCAACCAGCCAACAG TGAATTGCTGGTCTTTTTCATCCTCCAGTATGTGGTCTGCTTGATGGCCT GGGCGCAATCGTTCGTGTTCGTGCGCTTCATCTCCAATCTGGAAGCCCCC AGTCGGGTTGGTCCCTATAAATTGGTCGGATTGCTGGGAGCGGGCGGGAT GGGCCAGGTCTGG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig53062:29..541+

>mRNA_P-wetherbeei_contig53062.1.1 ID=mRNA_P-wetherbeei_contig53062.1.1|Name=mRNA_P-wetherbeei_contig53062.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig53062:29..541+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTCTTTCTTTTCTTGTTCTCGACCTTCGTCTACTACCTGACGCGAAG
GCTAGAGCCGGCGCAGTCTCTCAATCTGGGCCGCTTTTATCTGATCGTCG
TCTGCTTCGTGCTGGCTTACGCCGACTGGATGCCGGGTCAATCGGTTTTT
GAATGGACCCCGGGAACTCTGGATATGGCGGATTGGAAGGCGACAGGGCC
TTCCTGGGTAGCTGTCGCGGTTTTGTGCTTCACTTTGATTTTGCCGGCGC
GGCCGCGAGAGACTCTGCTGTTGGCGGTCGTGGCTACCTCCACGAGCCCG
TTGGCCTGGCTGATCTCTCGCAATCTCTACACCAGCCAACCAGCCAACAG
TGAATTGCTGGTCTTTTTCATCCTCCAGTATGTGGTCTGCTTGATGGCCT
GGGCGCAATCGTTCGTGTTCGTGCGCTTCATCTCCAATCTGGAAGCCCCC
AGTCGGGTTGGTCCCTATAAATTGGTCGGATTGCTGGGAGCGGGCGGGAT
GGGCCAGGTCTGG
back to top