mRNA_P-wetherbeei_contig52966.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52966.1.1 vs. uniprot
Match: A0A7C5Z8G5_9BACT (O-antigen ligase domain-containing protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7C5Z8G5_9BACT) HSP 1 Score: 129 bits (325), Expect = 3.420e-32 Identity = 64/146 (43.84%), Postives = 87/146 (59.59%), Query Frame = 1
Query: 4 GYSPIFVGEILLLSGIFILLFCTPWWRVLEVPAAWPLVGLMFWGLVRTIPYISEYRVDAFRDAVIWGYGIFAFILFGCLVASPKMLPRFVKQYHTFSIIFLSCVPVVMLLSMFLGESIPKWPGSGTPIITNKCGDVLVHLGGILAY 441
GY+P+F+GE++L+ G F+LL VL + A PL+ M WG TIP++ Y DA RDAV+WGYG +AFI+ G L+ASP L + V Y F+ FL P + F E +P +PG PII K GD+ VHL G+ +Y
Sbjct: 66 GYNPLFIGELMLVIGAFVLLRIGVLVHVLNLRAMLPLILFMCWGAACTIPHLQRYGRDAIRDAVVWGYGTYAFIVAGLLIASPLRLQKIVIYYRKFAYAFLILAPFFWFVCTFFEEQLPTFPGGHVPIIQMKGGDMCVHLAGVFSY 211
BLAST of mRNA_P-wetherbeei_contig52966.1.1 vs. uniprot
Match: A0A142XYG1_9BACT (O-Antigen ligase n=1 Tax=Pirellula sp. SH-Sr6A TaxID=1632865 RepID=A0A142XYG1_9BACT) HSP 1 Score: 119 bits (299), Expect = 1.340e-28 Identity = 66/180 (36.67%), Postives = 100/180 (55.56%), Query Frame = 1
Query: 1 IGYSPIFVGEILLLSGIFILLFCTPWWRVLEVPAAWPLVGLMFWGLVRTIPYISEYRVDAFRDAVIWGYGIFAFILFGCLVASPKMLPRFVKQYHTFSIIFLSCVPVVMLLSMFLGESIPKWPGSGTPIITNKCGDVLVHLGGILAYWTTGLCGNSVSVSLLLLFTLNVAIMGIQTRGGL 540
+G P+FVGE++L+ G F++ W + WPL LM WG RT+PY+ +Y A RDAV+ GY +FA + F + + P+ L V+ Y F+ FL +P++ + S FL + +P P + + K GD VHL G++A+W G+ G + S LL+LF A + RGGL
Sbjct: 47 LGIPPLFVGELVLVLGAFVVFLSGYWNLFFQSRLIWPLWVLMVWGAYRTLPYLGQYGFHALRDAVLLGYALFAILTFVYICSKPERLSILVRGYARFATWFLVLIPLIWIPSQFLQDKLPANPITFL-FLNAKGGDTGVHLAGVMAFWAVGI-GAAPSFRLLILFCFTFAWVAAVNRGGL 224
BLAST of mRNA_P-wetherbeei_contig52966.1.1 vs. uniprot
Match: A0A7X0H9Z3_9BACT (Uncharacterized protein n=1 Tax=Algisphaera agarilytica TaxID=1385975 RepID=A0A7X0H9Z3_9BACT) HSP 1 Score: 113 bits (282), Expect = 3.720e-26 Identity = 66/181 (36.46%), Postives = 100/181 (55.25%), Query Frame = 1
Query: 1 IGYSPIFVGEILLLSGIFILLFCTPWWRVLEVPAAWPLVGLMFWGLVRTIPYISEYRVDAFRDAVIWGYGIFAFILFGCLVASPKMLPRFVKQYHTFSIIFLSCVPVVMLLSMFLGESIPKWP-GSGTPIITNKCGDVLVHLGGILAYWTTGLCGNSVSVSLLLLFTLNVAIMGIQTRGGL 540
IG P+F+ EI L G L W L P + +V L+ WGL+RT+PY+ ++++DA RD ++ GY A + +++ PK+LP + +Y F+ +FL +P + L LG+++P WP S II K GD+ VHLGGI A GL S+ + L L + + G +RGGL
Sbjct: 51 IGLPPLFISEITLALGALTFLIQPRWRETLSQPISIMIVLLLGWGLMRTVPYLGQWKLDAIRDFMLLGYMTTALMAAAVVMSQPKLLPWLLSKYQVFAKVFLVAMPPLWLADQVLGDNMPSWPWASQVGIIMLKPGDMPVHLGGIAALSILGLFRGK-SLMWMGLLCLLLGVTGAISRGGL 230
BLAST of mRNA_P-wetherbeei_contig52966.1.1 vs. uniprot
Match: A0A1G0LS15_9DELT (Uncharacterized protein n=1 Tax=Geobacteraceae bacterium GWC2_55_20 TaxID=1798317 RepID=A0A1G0LS15_9DELT) HSP 1 Score: 112 bits (280), Expect = 5.050e-26 Identity = 61/181 (33.70%), Postives = 99/181 (54.70%), Query Frame = 1
Query: 1 IGYSPIFVGEILLLSGIFILLFCTPWWRVLEVPAAWPLVGLMFWGLVRTIPYISEYRVDAFRDAVIWGYGIFAFILFGCLVASPKMLPRFVKQYHTFSIIFLSCVPVVMLLSMFLGESIPKWPGSGTP-IITNKCGDVLVHLGGILAYWTTGLCGNSVSVSLLLLFTLNVAIMGIQTRGGL 540
IG+ P+++GE+ LL+G++ + + ++ + + G+ T+PYI+ Y+VDA RDA +WGYG+FA ILF + P L +++ Y F IFL PVV L+ + K P +G + K DV+VHL GI A++ TG + ++LL+ LN+ + TR G+
Sbjct: 26 IGFPPLYIGELALLAGLYSIAKSNAIQNITKLKVNYVFIAFFLVGISCTLPYITRYKVDALRDAAVWGYGLFAIILFCKIYERPSTLEYYIELYSKFVFIFLIITPVVWLIVQLFYGGVSKLPSAGQKQLFYMKTPDVMVHLSGITAFFVTGFARFNKFYAVLLV--LNIMLCAYSTRAGM 204
BLAST of mRNA_P-wetherbeei_contig52966.1.1 vs. uniprot
Match: A0A7W8LPV3_9DEIO (Uncharacterized protein n=1 Tax=Deinococcus budaensis TaxID=1665626 RepID=A0A7W8LPV3_9DEIO) HSP 1 Score: 110 bits (274), Expect = 6.610e-25 Identity = 63/169 (37.28%), Postives = 95/169 (56.21%), Query Frame = 1
Query: 1 IGYSPIFVGEILLLSGIFILLFCTPWWRVLEVPAAWPLVGLMFWGLVRTIPYISEYRVDAFRDAVIWGYGIFAFILFGCLVASPKMLPRFV---KQYHTFSIIFLSCVPVVMLLSMFLGESIPKWPGSGTPIITNKCGDVLVHLGGILAYWTTGL-----CGNSVSVSL 483
+G P+FVGE+ L G+ LL ++ P +PL+ L+ G T+PY+ Y +DAFRDA +WGYG+FA I+ G L+ + R + + Y ++ +FL +PV +++S ++IP PGS ++ K GDV VHL GI A GL GN+ SV+L
Sbjct: 76 LGAPPVFVGEMALALGLLALLLTGALRGLVAAPPLYPLLALLLTGAAATVPYVGVYGIDAFRDAALWGYGLFALIVAGLLLRGNRGEGRVLGAARGYVRYAPLFLLWMPVALVISELYADAIPLTPGSDVRLLDLKGGDVAVHLAGIAALLLLGLPRLLAAGNARSVAL 244
BLAST of mRNA_P-wetherbeei_contig52966.1.1 vs. uniprot
Match: A0A1F2T7T8_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21 TaxID=1797183 RepID=A0A1F2T7T8_9BACT) HSP 1 Score: 109 bits (272), Expect = 1.120e-24 Identity = 61/153 (39.87%), Postives = 87/153 (56.86%), Query Frame = 1
Query: 1 IGYSPIFVGEILLLSGIFILLFCTPWWRVLEVPA---AWPLVGLMFWGLVRTIPYISEYRVDAFRDAVIWGYGIFAFILFGCLVASPKMLPRFVKQYHTFSIIFLSCVPVVMLLSMFLGESIPKWPGSGTPIITNKCGDVLVHLGGILAYWTT 450
+G P++VGEI L +G LF T VL++ A W L L W +T+PY+S YR+DA RDAV+WGYG FA ++F +V S L V +Y ++F++ VPV+ L G+ IP PG+ +++ K GD VHL G A+ T
Sbjct: 69 VGVPPVYVGEIALAAGALTTLFITR--NVLQLMALRQTWLLFALAAWSACQTVPYVSTYRMDALRDAVLWGYGGFA-VMFAAVVLSTDQLGTIVARYGRAILLFVAWVPVLYALVRLFGDYIPTLPGTEVALLSFKMGDAGVHLAGAAAFALT 218
BLAST of mRNA_P-wetherbeei_contig52966.1.1 vs. uniprot
Match: UPI0010383425 (O-antigen ligase family protein n=3 Tax=Lichenihabitans TaxID=2723776 RepID=UPI0010383425) HSP 1 Score: 108 bits (269), Expect = 2.350e-24 Identity = 63/179 (35.20%), Postives = 98/179 (54.75%), Query Frame = 1
Query: 4 GYSPIFVGEILLLSGIFILLFCTPWWRVLEVPAAWPLVGLMFWGLVRTIPYISEYRVDAFRDAVIWGYGIFAFILFGCLVASPKMLPRFVKQYHTFSIIFLSCVPVVMLLSMFLGESIPKWPGSGTPIITNKCGDVLVHLGGILAYWTTGLCGNSVSVSLLLLFTLNVAIMGIQTRGGL 540
G +P F GEI+LL+G+ L P V P + L LM + RTIP+I Y++DA RD VI YGIF F++ ++ P + + ++ TF I+ V+ + +LG IP WPGS TP+I + G+V V GG + GL ++++ ++L L V ++ Q+RGG+
Sbjct: 48 GIAPFFPGEIMLLAGLVTFLLPFPSLAVFISPPSILLAMLMVLTIARTIPFIGIYKIDALRDTVIVMYGIFGFVIANLILEKPTRIDQAMRWAGTFFTIYGFAAAVIYVSQKYLGNVIPHWPGSDTPLIALRGGEVAVQAGGAALFGLLGLKRSTLAWVVMLF--LGVVVVSAQSRGGM 224
BLAST of mRNA_P-wetherbeei_contig52966.1.1 vs. uniprot
Match: A0A060DLY2_AZOBR (O-antigen ligase domain-containing protein n=9 Tax=Azospirillum TaxID=191 RepID=A0A060DLY2_AZOBR) HSP 1 Score: 107 bits (267), Expect = 4.000e-24 Identity = 65/179 (36.31%), Postives = 96/179 (53.63%), Query Frame = 1
Query: 1 IGYSPIFVGEILLLSGIFILLFCTPWWRVLEVPAAWPLVGLMFWGLVRTIPYISEYRVDAFRDAVIWGYGIFAFILFGCLVASPKMLPRFVKQYHTFSIIFLSCVPVVMLLSMFLGESIPKWPGSGTPIITNKCGDVLVHLGGILAYWTTGLCGNSVSVSLLLLFTLNVAIMGIQTRGG 537
IG P+F+GEILLL+G+ ++L L L L+ W L RTIP++ Y DA RD+VI YG+FAFI+ L P+ L R V Y +F+++F+S +P+V L IP WP P+I+ + G+V VH GI + G + L L + +A++ +RGG
Sbjct: 40 IGMPPLFIGEILLLTGLLVMLRTGGIVATLSSLPGTLLAILIVWVLARTIPFLGLYSFDALRDSVIVMYGLFAFIIVVVLYDEPERLRRLVLAYGSFAVLFVSIMPIVYPGYQLLQSQIPIWPRYNVPLISLRPGEVGVHFAGIALFVLLGF--RRLGPVQLALLVVGIAMVAAHSRGG 216
BLAST of mRNA_P-wetherbeei_contig52966.1.1 vs. uniprot
Match: UPI001CE3743B (O-antigen ligase family protein n=1 Tax=Bradyrhizobium sp. WSM 1704 TaxID=2821404 RepID=UPI001CE3743B) HSP 1 Score: 107 bits (266), Expect = 5.620e-24 Identity = 61/180 (33.89%), Postives = 94/180 (52.22%), Query Frame = 1
Query: 1 IGYSPIFVGEILLLSGIFILLFCTPWWRVLEVPAAWPLVGLMFWGLVRTIPYISEYRVDAFRDAVIWGYGIFAFILFGCLVASPKMLPRFVKQYHTFSIIFLSCVPVVMLLSMFLGESIPKWPGSGTPIITNKCGDVLVHLGGILAYWTTGLCGNSVSVSLLLLFTLNVAIMGIQTRGGL 540
+G PIF+GEI L G+ +LL L A LV M W L+RT+P+I Y DA RD+V+ YG FAFI+ L+ + ++ Y TF IF+ +P + ++GE IP+WPGS PI+ + G+V HL G + G + +S +++ + + +RGG+
Sbjct: 45 LGLPPIFIGEISLFLGLLVLLRTGCLVATLTTLPALALVTAMLWVLLRTLPFIETYGFDALRDSVVLMYGGFAFIVIALLLDDGNRINSILRYYGTFVRIFIPTIPFIYAFHRYMGEQIPRWPGSDVPILQSS-GEVTTHLAGAAVFALVGF--SRMSPLAIVILSATAVMASAASRGGM 221
BLAST of mRNA_P-wetherbeei_contig52966.1.1 vs. uniprot
Match: A0A0N7I8T6_AZOBR (O-antigen ligase domain-containing protein n=17 Tax=Azospirillum TaxID=191 RepID=A0A0N7I8T6_AZOBR) HSP 1 Score: 106 bits (264), Expect = 1.040e-23 Identity = 58/180 (32.22%), Postives = 95/180 (52.78%), Query Frame = 1
Query: 1 IGYSPIFVGEILLLSGIFILLFCTPWWRVLEVPAAWPLVGLMFWGLVRTIPYISEYRVDAFRDAVIWGYGIFAFILFGCLVASPKMLPRFVKQYHTFSIIFLSCVPVVMLLSMFLGESIPKWPGSGTPIITNKCGDVLVHLGGILAYWTTGLCGNSVSVSLLLLFTLNVAIMGIQTRGGL 540
IG P+F+GE+LLLSG+ ++L + + L L+ W + RT+P+ Y DA RD+VI YG+ AF++ L P+ L R V Y F++ F++ +P++ L L IP WP G P I+ + G+V VH G+ + G ++ L + +A++ +RGG+
Sbjct: 40 IGAPPLFIGEVLLLSGLLVMLRTGGVFATVSSLPGTLLAILIVWVMARTLPFFGTYSFDALRDSVIVMYGLLAFVVIALLYDEPERLRRLVLAYGGFAVFFVTVMPIIYPLFQLLNAQIPTWPRYGVPFISLRPGEVGVHFAGVALFVLLGF--RRLNPLQLAMLVFGMALVAAHSRGGM 217 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52966.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52966.1.1 >prot_P-wetherbeei_contig52966.1.1 ID=prot_P-wetherbeei_contig52966.1.1|Name=mRNA_P-wetherbeei_contig52966.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=180bp IGYSPIFVGEILLLSGIFILLFCTPWWRVLEVPAAWPLVGLMFWGLVRTIback to top mRNA from alignment at P-wetherbeei_contig52966:2..541- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52966.1.1 ID=mRNA_P-wetherbeei_contig52966.1.1|Name=mRNA_P-wetherbeei_contig52966.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig52966:2..541- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52966:2..541- >mRNA_P-wetherbeei_contig52966.1.1 ID=mRNA_P-wetherbeei_contig52966.1.1|Name=mRNA_P-wetherbeei_contig52966.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig52966:2..541- (Phaeothamnion wetherbeei SAG_119_79)back to top |