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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 2793 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-26_005950.1 |
| Cds size | 2622 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186793.4223177-UTR-P-wetherbeei_contig5296:409..520 | 1683186793.4223177-UTR-P-wetherbeei_contig5296:409..520 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig5296 410..520 + |
| 1683186793.4514153-UTR-P-wetherbeei_contig5296:3451..3511 | 1683186793.4514153-UTR-P-wetherbeei_contig5296:3451..3511 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig5296 3452..3511 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186793.4325738-CDS-P-wetherbeei_contig5296:520..1087 | 1683186793.4325738-CDS-P-wetherbeei_contig5296:520..1087 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig5296 521..1087 + |
| 1683186793.441889-CDS-P-wetherbeei_contig5296:1396..3451 | 1683186793.441889-CDS-P-wetherbeei_contig5296:1396..3451 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig5296 1397..3451 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5296.1.1 >prot_P-wetherbeei_contig5296.1.1 ID=prot_P-wetherbeei_contig5296.1.1|Name=mRNA_P-wetherbeei_contig5296.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=874bp
MENEIIKLREAIELLEARHAEHFAELRARLEEQAAAIFELHVAAKAAAAA
RNSRRELSDNLPNTLLAVHRGLNPFVSNEGTAHVQHFPCFEDAVQPLERI
PINGATTKPHGCGGGGGGGAGVVANTLDFSIETLSHLNNHTDFGIGLAGL
ESANGATPSASHPSTPRGTAEAEQVQERIIAEAFFADEQATAVLRTPPPR
RQPANASEASYLERASDGHETATGQAMTDEEYREAHEGQPPFGMHAGGNG
DNRASAGSSAAGGAGGGDGGIMCMADVFAAAVRAGTLQGDDDGGESNAVG
GRPSKGCQTAWSISPLHDDARGASVGVGAAATTSMAASVVRLPPRLSGKP
HEARSFIIRGHLSGIDAPSPRGWAHGGPPLASPELSPIAKGASAGSSCLG
GGSGAQRDAADSAVRRLSPILSQSAEADSSNSRSCSYHRANDDISKEPAV
GTTEAAEGLSKGCGCCGAGRGTAYSGAINLYSGDSNCSARSGDNVFWSEV
GGGGGGGERMRCVAPLRSQTLRPPPRGVEMPADFSLNGLRENADMDAERW
AGAFGGEYDLGRALSRSGPLALDPAVAGSPLEAWRPRQRSAAVFLHEAGA
LGLPQGGSVRLEYACSMARARRDSGDGFCVSGGGVGNSGRGSGNCFGHGS
TGVADRRVFPFEDEPEPWPGPGVSSLAAAAVEEEVAQRLHGRLAVPCCSE
VAGADSGGGAEGTSTAAYTTVVLVGGSGFSGRSASGANLAPMQETHDRDI
ATAKGAATAKGAATGEYDGGLGASSSSTTNRKAVDGSGNAGSTVDIGGSD
SGGSTSRHAGGNRVDILRASYDSTSGCARSGGWGGSRSASSLLGSRYWRD
RLGAHLDLASSRDSRTGGWKVAL* back to topmRNA from alignment at P-wetherbeei_contig5296:410..3511+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig5296.1.1 ID=mRNA_P-wetherbeei_contig5296.1.1|Name=mRNA_P-wetherbeei_contig5296.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3102bp|location=Sequence derived from alignment at P-wetherbeei_contig5296:410..3511+ (Phaeothamnion wetherbeei SAG_119_79)
GAACTTTCTGGCGTTCATCCGTCGTCGTTAGGGCCAGGGGCCTATGGTAT
CGATACAGTGTTCGTACAGTATCTTTCTACCTTTTTTATTTGAAAAGGGG
AATGGTGATAAATGGAGAACGAGATCATAAAGCTTCGCGAGGCGATTGAG
CTCTTGGAAGCCCGTCACGCAGAGCATTTCGCGGAGCTGAGAGCGCGCCT
GGAAGAACAAGCAGCTGCAATTTTTGAGCTGCATGTAGCGGCGAAAGCAG
CGGCGGCGGCACGAAATTCACGTCGAGAGCTCAGCGACAATTTGCCAAAC
ACGTTGCTGGCAGTTCATCGCGGTTTGAACCCTTTCGTTTCAAACGAAGG
GACAGCGCATGTTCAGCACTTCCCGTGCTTCGAAGACGCTGTGCAACCAT
TGGAGCGCATCCCCATCAACGGCGCAACAACAAAACCTCACGGCTGCGGC
GGCGGCGGCGGCGGCGGCGCAGGGGTAGTCGCCAACACTCTCGATTTTAG
TATCGAAACGCTGAGCCATCTGAACAACCACACCGATTTCGGCATCGGCC
TTGCAGGGCTGGAGAGCGCGAATGGCGCGACGCCCAGCGCATCGCATCCA
TCCACTCCCCGCGGCACTGCGGAAGCGGAACAAGTTCAAGAACGCATAAT
TGCCGAGGCATTCTTTGCGGATGAGCAGGTGTGTTTCGCATGGCATTCCA
GTCTTGAAAGGTTTTCATGAATCTGTGAGTCCTCTGTTGCTTTTGAATTT
GAACCAATCCGTCGTAGGTGGTAGACTAATGCGGCATATTGTAGTCCTTT
TCAAAGAAACTGAGATGTTGAACACGGTGTGAATGTAAATCGTATCTGCT
TTGCTAGCCCAGATCGCTGATAGTGGTTTACGCGCAAGACTCTAGTTGTT
TAAAGCCCGCGTAGAGGAGTTTTATAAGCAAAGTCGGATCGATTGTTCCA
CATTTTGCCATCCCTCCCCACGTTGGTAACATTGCAGGCCACAGCGGTTC
TGCGAACGCCCCCTCCGCGGCGTCAGCCTGCGAACGCTTCTGAAGCGTCC
TACTTGGAAAGGGCCAGCGACGGCCATGAGACGGCGACCGGCCAGGCGAT
GACTGATGAGGAGTACAGGGAGGCGCACGAAGGTCAGCCGCCTTTTGGCA
TGCATGCGGGCGGCAACGGCGACAACAGAGCTTCTGCAGGGAGCTCGGCG
GCCGGCGGTGCTGGCGGCGGCGATGGCGGCATAATGTGTATGGCTGACGT
GTTTGCGGCGGCTGTGCGGGCCGGCACGTTGCAGGGCGACGATGATGGCG
GTGAAAGCAATGCAGTCGGCGGCAGACCGAGCAAAGGCTGCCAAACTGCA
TGGAGCATCAGCCCGCTGCACGATGATGCCCGCGGCGCCAGCGTCGGCGT
CGGCGCTGCAGCGACAACGTCGATGGCCGCATCAGTCGTGAGACTGCCGC
CGAGGCTTTCTGGCAAGCCGCACGAAGCTCGATCATTCATCATCCGCGGT
CACCTTAGCGGTATCGACGCCCCGAGCCCGCGCGGCTGGGCGCACGGTGG
GCCCCCTCTCGCTAGCCCCGAGCTCAGCCCGATCGCCAAAGGCGCGTCTG
CGGGATCGTCGTGCCTCGGCGGCGGCAGCGGAGCGCAACGAGATGCCGCC
GACTCGGCAGTGCGGCGGCTGTCCCCCATTTTAAGCCAGAGCGCGGAGGC
AGACAGCAGCAACAGCCGCAGCTGCAGCTACCACCGCGCCAATGACGACA
TCTCCAAAGAGCCCGCTGTCGGCACTACCGAGGCCGCAGAGGGGTTGTCC
AAAGGCTGCGGCTGCTGCGGGGCGGGCAGAGGGACAGCATATAGCGGCGC
TATCAACCTGTACAGCGGCGACAGCAACTGCTCGGCCAGGAGCGGGGACA
ATGTTTTTTGGTCTGAGGTTGGCGGCGGTGGCGGCGGCGGTGAGCGCATG
CGATGCGTTGCTCCGCTGCGGTCGCAGACATTGCGTCCGCCGCCACGCGG
CGTCGAAATGCCCGCGGACTTCTCACTAAACGGCCTCCGCGAGAACGCCG
ACATGGATGCGGAGCGCTGGGCGGGCGCATTTGGCGGCGAATACGACCTC
GGCCGGGCGCTTTCTCGTTCGGGGCCGCTGGCGCTTGATCCTGCGGTTGC
CGGATCGCCGCTGGAAGCGTGGCGCCCACGGCAGCGCAGCGCCGCAGTGT
TTCTACATGAGGCCGGGGCGCTGGGGCTGCCCCAAGGCGGCTCCGTACGA
CTTGAGTATGCGTGCAGCATGGCGCGGGCAAGGCGTGACAGCGGCGACGG
CTTTTGCGTTTCCGGCGGCGGTGTCGGCAATAGCGGGCGTGGCAGCGGCA
ATTGCTTTGGCCACGGCAGCACGGGCGTGGCGGACCGTCGAGTCTTTCCT
TTCGAGGACGAGCCTGAGCCGTGGCCGGGGCCAGGCGTCTCGAGCTTAGC
GGCGGCGGCGGTGGAGGAGGAGGTGGCCCAGCGACTGCACGGCAGGCTCG
CCGTTCCTTGCTGCTCCGAGGTTGCCGGAGCCGACAGCGGGGGCGGGGCT
GAGGGGACGTCCACCGCGGCATACACGACGGTGGTGCTAGTTGGCGGCAG
CGGCTTCAGTGGCAGGTCGGCTAGCGGCGCCAACCTCGCTCCGATGCAGG
AAACACATGATAGAGACATCGCCACAGCCAAAGGCGCCGCCACAGCCAAA
GGCGCCGCCACAGGCGAGTATGACGGCGGCCTCGGTGCCAGCAGCAGCAG
CACCACCAACCGGAAAGCCGTCGACGGCAGTGGCAATGCCGGCAGCACCG
TCGACATCGGCGGCAGCGATAGCGGTGGTAGCACCAGCCGTCATGCTGGA
GGCAACAGGGTTGACATTCTCCGTGCAAGCTACGACAGCACTTCCGGATG
TGCACGCAGCGGTGGCTGGGGCGGGAGCCGCAGTGCGTCATCACTTTTGG
GCAGCCGCTACTGGCGCGACCGTCTTGGGGCCCACCTCGACCTTGCGTCG
TCGCGCGATTCCCGTACCGGCGGTTGGAAGGTGGCACTGTGAAACGAAAA
CGACAGGCTCTTTCTGCTGATGCATTTAATGATGTATTATTGATGATCCT
CC back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig5296:410..3511+ >mRNA_P-wetherbeei_contig5296.1.1 ID=mRNA_P-wetherbeei_contig5296.1.1|Name=mRNA_P-wetherbeei_contig5296.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2622bp|location=Sequence derived from alignment at P-wetherbeei_contig5296:410..3511+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGAACGAGATCATAAAGCTTCGCGAGGCGATTGAGCTCTTGGAAGC
CCGTCACGCAGAGCATTTCGCGGAGCTGAGAGCGCGCCTGGAAGAACAAG
CAGCTGCAATTTTTGAGCTGCATGTAGCGGCGAAAGCAGCGGCGGCGGCA
CGAAATTCACGTCGAGAGCTCAGCGACAATTTGCCAAACACGTTGCTGGC
AGTTCATCGCGGTTTGAACCCTTTCGTTTCAAACGAAGGGACAGCGCATG
TTCAGCACTTCCCGTGCTTCGAAGACGCTGTGCAACCATTGGAGCGCATC
CCCATCAACGGCGCAACAACAAAACCTCACGGCTGCGGCGGCGGCGGCGG
CGGCGGCGCAGGGGTAGTCGCCAACACTCTCGATTTTAGTATCGAAACGC
TGAGCCATCTGAACAACCACACCGATTTCGGCATCGGCCTTGCAGGGCTG
GAGAGCGCGAATGGCGCGACGCCCAGCGCATCGCATCCATCCACTCCCCG
CGGCACTGCGGAAGCGGAACAAGTTCAAGAACGCATAATTGCCGAGGCAT
TCTTTGCGGATGAGCAGGCCACAGCGGTTCTGCGAACGCCCCCTCCGCGG
CGTCAGCCTGCGAACGCTTCTGAAGCGTCCTACTTGGAAAGGGCCAGCGA
CGGCCATGAGACGGCGACCGGCCAGGCGATGACTGATGAGGAGTACAGGG
AGGCGCACGAAGGTCAGCCGCCTTTTGGCATGCATGCGGGCGGCAACGGC
GACAACAGAGCTTCTGCAGGGAGCTCGGCGGCCGGCGGTGCTGGCGGCGG
CGATGGCGGCATAATGTGTATGGCTGACGTGTTTGCGGCGGCTGTGCGGG
CCGGCACGTTGCAGGGCGACGATGATGGCGGTGAAAGCAATGCAGTCGGC
GGCAGACCGAGCAAAGGCTGCCAAACTGCATGGAGCATCAGCCCGCTGCA
CGATGATGCCCGCGGCGCCAGCGTCGGCGTCGGCGCTGCAGCGACAACGT
CGATGGCCGCATCAGTCGTGAGACTGCCGCCGAGGCTTTCTGGCAAGCCG
CACGAAGCTCGATCATTCATCATCCGCGGTCACCTTAGCGGTATCGACGC
CCCGAGCCCGCGCGGCTGGGCGCACGGTGGGCCCCCTCTCGCTAGCCCCG
AGCTCAGCCCGATCGCCAAAGGCGCGTCTGCGGGATCGTCGTGCCTCGGC
GGCGGCAGCGGAGCGCAACGAGATGCCGCCGACTCGGCAGTGCGGCGGCT
GTCCCCCATTTTAAGCCAGAGCGCGGAGGCAGACAGCAGCAACAGCCGCA
GCTGCAGCTACCACCGCGCCAATGACGACATCTCCAAAGAGCCCGCTGTC
GGCACTACCGAGGCCGCAGAGGGGTTGTCCAAAGGCTGCGGCTGCTGCGG
GGCGGGCAGAGGGACAGCATATAGCGGCGCTATCAACCTGTACAGCGGCG
ACAGCAACTGCTCGGCCAGGAGCGGGGACAATGTTTTTTGGTCTGAGGTT
GGCGGCGGTGGCGGCGGCGGTGAGCGCATGCGATGCGTTGCTCCGCTGCG
GTCGCAGACATTGCGTCCGCCGCCACGCGGCGTCGAAATGCCCGCGGACT
TCTCACTAAACGGCCTCCGCGAGAACGCCGACATGGATGCGGAGCGCTGG
GCGGGCGCATTTGGCGGCGAATACGACCTCGGCCGGGCGCTTTCTCGTTC
GGGGCCGCTGGCGCTTGATCCTGCGGTTGCCGGATCGCCGCTGGAAGCGT
GGCGCCCACGGCAGCGCAGCGCCGCAGTGTTTCTACATGAGGCCGGGGCG
CTGGGGCTGCCCCAAGGCGGCTCCGTACGACTTGAGTATGCGTGCAGCAT
GGCGCGGGCAAGGCGTGACAGCGGCGACGGCTTTTGCGTTTCCGGCGGCG
GTGTCGGCAATAGCGGGCGTGGCAGCGGCAATTGCTTTGGCCACGGCAGC
ACGGGCGTGGCGGACCGTCGAGTCTTTCCTTTCGAGGACGAGCCTGAGCC
GTGGCCGGGGCCAGGCGTCTCGAGCTTAGCGGCGGCGGCGGTGGAGGAGG
AGGTGGCCCAGCGACTGCACGGCAGGCTCGCCGTTCCTTGCTGCTCCGAG
GTTGCCGGAGCCGACAGCGGGGGCGGGGCTGAGGGGACGTCCACCGCGGC
ATACACGACGGTGGTGCTAGTTGGCGGCAGCGGCTTCAGTGGCAGGTCGG
CTAGCGGCGCCAACCTCGCTCCGATGCAGGAAACACATGATAGAGACATC
GCCACAGCCAAAGGCGCCGCCACAGCCAAAGGCGCCGCCACAGGCGAGTA
TGACGGCGGCCTCGGTGCCAGCAGCAGCAGCACCACCAACCGGAAAGCCG
TCGACGGCAGTGGCAATGCCGGCAGCACCGTCGACATCGGCGGCAGCGAT
AGCGGTGGTAGCACCAGCCGTCATGCTGGAGGCAACAGGGTTGACATTCT
CCGTGCAAGCTACGACAGCACTTCCGGATGTGCACGCAGCGGTGGCTGGG
GCGGGAGCCGCAGTGCGTCATCACTTTTGGGCAGCCGCTACTGGCGCGAC
CGTCTTGGGGCCCACCTCGACCTTGCGTCGTCGCGCGATTCCCGTACCGG
CGGTTGGAAGGTGGCACTGTGA back to top
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