mRNA_P-wetherbeei_contig52891.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig52891.1.1
Unique NamemRNA_P-wetherbeei_contig52891.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig52891.1.1 vs. uniprot
Match: A0A2E5ZZY5_9GAMM (Alcohol dehydrogenase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E5ZZY5_9GAMM)

HSP 1 Score: 209 bits (531), Expect = 2.920e-64
Identity = 102/148 (68.92%), Postives = 116/148 (78.38%), Query Frame = 1
Query:    7 TVAAVQTELGGKLLLEEIDLPDPGPDQVTVKLYSSGVCHSQLHQMHNPGLGRPLLLGHEGTGVVTRVGKGVTHVKAGDLCIVTWVPRTPVRGPMAREMTGATFKGQAAHGSVYTWARDVQTSKELVVPIPKEHPHDLSCIGGCAVLTG 450
            T AAVQTE    L++EE++LPDP  DQV VKL SSGVCHSQLHQMHNP   RP LLGHEGTG+VT VG GVTH++ GD CIVTWVPRT V   M  + TGATF+G+ A G+VYTW++DV TS  LVVPIP EHP D+SCI GCAVLTG
Sbjct:    6 TTAAVQTEFEAPLVVEELELPDPRQDQVRVKLLSSGVCHSQLHQMHNPNTPRPGLLGHEGTGIVTDVGAGVTHLQEGDKCIVTWVPRTQVDRRMMGQPTGATFRGEPAMGAVYTWSKDVLTSGALVVPIPDEHPDDVSCIVGCAVLTG 153          
BLAST of mRNA_P-wetherbeei_contig52891.1.1 vs. uniprot
Match: A0A2E4UV74_9GAMM (PKS_ER domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E4UV74_9GAMM)

HSP 1 Score: 204 bits (520), Expect = 1.320e-62
Identity = 99/148 (66.89%), Postives = 115/148 (77.70%), Query Frame = 1
Query:    7 TVAAVQTELGGKLLLEEIDLPDPGPDQVTVKLYSSGVCHSQLHQMHNPGLGRPLLLGHEGTGVVTRVGKGVTHVKAGDLCIVTWVPRTPVRGPMAREMTGATFKGQAAHGSVYTWARDVQTSKELVVPIPKEHPHDLSCIGGCAVLTG 450
            T+AAVQT     L+++E+ LPDP PDQV VKL SSGVCHSQLHQMHNP   RP LLGHEGTG+VT VG GVTH++ GD CIVTWVPRT V   +  + TGATF+G+ A G+VYTW+ DV TS  LVVPIP +HP D+SCI GCAVLTG
Sbjct:    6 TIAAVQTAFEEPLVVDELQLPDPRPDQVRVKLLSSGVCHSQLHQMHNPDGPRPGLLGHEGTGIVTDVGSGVTHLEEGDKCIVTWVPRTKVDRALMAQPTGATFRGEPALGAVYTWSNDVLTSGSLVVPIPDDHPDDVSCIVGCAVLTG 153          
BLAST of mRNA_P-wetherbeei_contig52891.1.1 vs. uniprot
Match: A0A2N0KY56_9CHLR (PKS_ER domain-containing protein n=9 Tax=cellular organisms TaxID=131567 RepID=A0A2N0KY56_9CHLR)

HSP 1 Score: 202 bits (513), Expect = 1.310e-61
Identity = 100/150 (66.67%), Postives = 117/150 (78.00%), Query Frame = 1
Query:    1 MKTVAAVQTELGGKLLLEEIDLPDPGPDQVTVKLYSSGVCHSQLHQMHNPGLGRPLLLGHEGTGVVTRVGKGVTHVKAGDLCIVTWVPRTPVRGPMAREMTGATFKGQAAHGSVYTWARDVQTSKELVVPIPKEHPHDLSCIGGCAVLTG 450
            MKTVAA+QT     L+++E+DLPDP PDQV VKL+SSGVCHSQLHQMHN  + RP++LGHEGTGVVT VG  VTHV+ GD  IVTWVPRTP RG   +  TGAT++ +   GSVYTW++DV  S ELVVPI KEHP D+S I GCAVLTG
Sbjct:    1 MKTVAAIQTAPEQPLVVDELDLPDPQPDQVIVKLFSSGVCHSQLHQMHNATVERPMVLGHEGTGVVTHVGSNVTHVQEGDHAIVTWVPRTPNRGRGFQTPTGATYQDKLVFGSVYTWSQDVLCSGELVVPIGKEHPTDISSIVGCAVLTG 150          
BLAST of mRNA_P-wetherbeei_contig52891.1.1 vs. uniprot
Match: A0A2E7I016_9CHLR (Alcohol dehydrogenase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A2E7I016_9CHLR)

HSP 1 Score: 195 bits (495), Expect = 8.960e-59
Identity = 88/150 (58.67%), Postives = 116/150 (77.33%), Query Frame = 1
Query:    1 MKTVAAVQTELGGKLLLEEIDLPDPGPDQVTVKLYSSGVCHSQLHQMHNPGLGRPLLLGHEGTGVVTRVGKGVTHVKAGDLCIVTWVPRTPVRGPMAREMTGATFKGQAAHGSVYTWARDVQTSKELVVPIPKEHPHDLSCIGGCAVLTG 450
            MK++AA+  E+G  L+++EI++PDP PDQV VKL SSGVCHSQLHQ+H P L RP +LGHEGTGVVT +G  V HVK GD  IVTWVPRTPV+G  A  ++G T++ +  +G VYTW +DV  +++ VVPI K++P D++CI GCA+LTG
Sbjct:   11 MKSLAAINLEIGKDLVVDEIEIPDPRPDQVVVKLSSSGVCHSQLHQIHQPDLPRPWMLGHEGTGVVTHIGSSVNHVKEGDTVIVTWVPRTPVKGRPASTLSGVTYREEPVNGQVYTWGQDVLLNEQYVVPIDKKYPADVTCIVGCAILTG 160          
BLAST of mRNA_P-wetherbeei_contig52891.1.1 vs. uniprot
Match: A0A382CZD6_9ZZZZ (PKS_ER domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382CZD6_9ZZZZ)

HSP 1 Score: 193 bits (491), Expect = 2.820e-58
Identity = 88/150 (58.67%), Postives = 115/150 (76.67%), Query Frame = 1
Query:    1 MKTVAAVQTELGGKLLLEEIDLPDPGPDQVTVKLYSSGVCHSQLHQMHNPGLGRPLLLGHEGTGVVTRVGKGVTHVKAGDLCIVTWVPRTPVRGPMAREMTGATFKGQAAHGSVYTWARDVQTSKELVVPIPKEHPHDLSCIGGCAVLTG 450
            MKT AA+QT  G  L+++E+D+PDP PDQV VKL+SSGVCHSQLHQ+ NP   RP++LGHEGTG+V+R+G  V+HVK GD  IVTWV R PV G +    +G T+ G+ A+G+V+TW+ DV  +++ VVPI K+ P D+SCI GCAVLTG
Sbjct:    1 MKTKAAIQTSYGNPLIIDELDIPDPKPDQVLVKLFSSGVCHSQLHQLENPNAPRPIILGHEGTGIVSRIGDNVSHVKEGDHVIVTWVRRNPVTGRVGNPPSGITYLGEPANGNVFTWSEDVLINEQYVVPISKDSPTDVSCIVGCAVLTG 150          
BLAST of mRNA_P-wetherbeei_contig52891.1.1 vs. uniprot
Match: A0A2E2DV24_9CHLR (Alcohol dehydrogenase n=5 Tax=root TaxID=1 RepID=A0A2E2DV24_9CHLR)

HSP 1 Score: 193 bits (490), Expect = 3.880e-58
Identity = 93/150 (62.00%), Postives = 114/150 (76.00%), Query Frame = 1
Query:    1 MKTVAAVQTELGGKLLLEEIDLPDPGPDQVTVKLYSSGVCHSQLHQMHNPGLGRPLLLGHEGTGVVTRVGKGVTHVKAGDLCIVTWVPRTPVRGPMAREMTGATFKGQAAHGSVYTWARDVQTSKELVVPIPKEHPHDLSCIGGCAVLTG 450
            MKT AA+Q   G +LL++E+++P+P  DQV VKLYSSGVCHSQLHQM N GL RPL+LGHEGTG+V +VG+ VTH++ GD  IVTWVPRTPVRG  A + +G T+  +  HGS YTW  DV  S + VVPIPK+ P D+SCI G AVLTG
Sbjct:    1 MKTRAAIQIAPGDQLLVDELEVPEPRADQVIVKLYSSGVCHSQLHQMENDGLPRPLVLGHEGTGIVAQVGRDVTHLREGDHAIVTWVPRTPVRGRPAVQPSGITYHEEPVHGSTYTWGEDVLISGDYVVPIPKDVPTDISCIVGXAVLTG 150          
BLAST of mRNA_P-wetherbeei_contig52891.1.1 vs. uniprot
Match: A0A7Z9S0U5_9BACT (Alcohol dehydrogenase (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Z9S0U5_9BACT)

HSP 1 Score: 190 bits (482), Expect = 4.650e-58
Identity = 92/150 (61.33%), Postives = 112/150 (74.67%), Query Frame = 1
Query:    1 MKTVAAVQTELGGKLLLEEIDLPDPGPDQVTVKLYSSGVCHSQLHQMHNPGLGRPLLLGHEGTGVVTRVGKGVTHVKAGDLCIVTWVPRTPVRGPMAREMTGATFKGQAAHGSVYTWARDVQTSKELVVPIPKEHPHDLSCIGGCAVLTG 450
            MK+VAA+    G  L+++EI++PDP PDQV VKLYSSGVCHSQLHQMHN  L RP+ LGHEGTGVVT VG  VTHVKAGD+ IVTWVPRT  +G  A E +G T++ +   GSVYTW +DV T+ E VV +  + P D+S I GCA+LTG
Sbjct:    1 MKSVAAIDVGHGKPLVVDEIEIPDPRPDQVIVKLYSSGVCHSQLHQMHNSALERPMTLGHEGTGVVTHVGSDVTHVKAGDMAIVTWVPRTARQGRWAPEPSGVTYREEEVSGSVYTWGQDVLTTGEYVVKVDDDVPKDVSSIVGCAILTG 150          
BLAST of mRNA_P-wetherbeei_contig52891.1.1 vs. uniprot
Match: A0A3D1YDH0_9CHLR (Alcohol dehydrogenase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A3D1YDH0_9CHLR)

HSP 1 Score: 191 bits (485), Expect = 2.190e-57
Identity = 86/150 (57.33%), Postives = 114/150 (76.00%), Query Frame = 1
Query:    1 MKTVAAVQTELGGKLLLEEIDLPDPGPDQVTVKLYSSGVCHSQLHQMHNPGLGRPLLLGHEGTGVVTRVGKGVTHVKAGDLCIVTWVPRTPVRGPMAREMTGATFKGQAAHGSVYTWARDVQTSKELVVPIPKEHPHDLSCIGGCAVLTG 450
            MK++AA+  E+GG+L+++EI++P+P PDQV VKL+SSGVCHSQLHQMH P L RPL+LGHEGTGV+T VG  V ++K GD  IVTWVP+TP    +    +G T++    +G+VYTW  DV   ++ VVPI K++P DLSCI GCA+LTG
Sbjct:    1 MKSIAAISMEVGGQLIIDEIEIPNPSPDQVIVKLFSSGVCHSQLHQMHQPELPRPLMLGHEGTGVITHVGTNVNNLKEGDHAIVTWVPKTPSSTRLKPSPSGVTYRETLVNGNVYTWGNDVLVHQDFVVPISKQYPTDLSCIVGCAILTG 150          
BLAST of mRNA_P-wetherbeei_contig52891.1.1 vs. uniprot
Match: A0A3D5G0G5_9CHLR (PKS_ER domain-containing protein n=3 Tax=Chloroflexi TaxID=200795 RepID=A0A3D5G0G5_9CHLR)

HSP 1 Score: 190 bits (482), Expect = 6.520e-57
Identity = 91/150 (60.67%), Postives = 112/150 (74.67%), Query Frame = 1
Query:    1 MKTVAAVQTELGGKLLLEEIDLPDPGPDQVTVKLYSSGVCHSQLHQMHNPGLGRPLLLGHEGTGVVTRVGKGVTHVKAGDLCIVTWVPRTPVRGPMAREMTGATFKGQAAHGSVYTWARDVQTSKELVVPIPKEHPHDLSCIGGCAVLTG 450
            MK+VAA+ T+ G  L +++I++P+P PDQV VK++SSGVCHSQLHQMHN     P +LGHEGTGVVT VG  VTH+K GD  IVTWV R PV+G  A   TG T++ +   G VYTW RDV T+++LVVPIPK  P D+SCI GCAVLTG
Sbjct:    1 MKSVAAIHTQHGAPLTVDQIEIPNPRPDQVIVKMFSSGVCHSQLHQMHNLNTQTPGVLGHEGTGVVTHVGSDVTHLKEGDHAIVTWVKRDPVKGRGASGPTGVTYREEPVSGGVYTWGRDVLTTEQLVVPIPKSVPTDISCIVGCAVLTG 150          
BLAST of mRNA_P-wetherbeei_contig52891.1.1 vs. uniprot
Match: A0A2E5J2U2_9CHLR (Alcohol dehydrogenase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A2E5J2U2_9CHLR)

HSP 1 Score: 189 bits (480), Expect = 1.240e-56
Identity = 94/150 (62.67%), Postives = 109/150 (72.67%), Query Frame = 1
Query:    1 MKTVAAVQTELGGKLLLEEIDLPDPGPDQVTVKLYSSGVCHSQLHQMHNPGLGRPLLLGHEGTGVVTRVGKGVTHVKAGDLCIVTWVPRTPVRGPMAREMTGATFKGQAAHGSVYTWARDVQTSKELVVPIPKEHPHDLSCIGGCAVLTG 450
            MK+ AAVQT     L L EI++PDP  DQV VKL SSG+CHSQLHQM NPGL RPLLLGHEGTG+VT +G  V+HVK GD  IVTWVPRTPV G  A   +G T++G   +G+VYTW  DV    + VV I K+HP D+SCI GCAVLTG
Sbjct:    1 MKSKAAVQTGPEEPLTLAEIEIPDPKDDQVLVKLTSSGICHSQLHQMDNPGLARPLLLGHEGTGIVTGIGDKVSHVKEGDQVIVTWVPRTPVSGRPAVPHSGITYQGTPVNGNVYTWGEDVLVRSDYVVSISKDHPKDVSCIVGCAVLTG 150          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52891.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E5ZZY5_9GAMM2.920e-6468.92Alcohol dehydrogenase n=2 Tax=Gammaproteobacteria ... [more]
A0A2E4UV74_9GAMM1.320e-6266.89PKS_ER domain-containing protein n=1 Tax=Gammaprot... [more]
A0A2N0KY56_9CHLR1.310e-6166.67PKS_ER domain-containing protein n=9 Tax=cellular ... [more]
A0A2E7I016_9CHLR8.960e-5958.67Alcohol dehydrogenase n=2 Tax=Chloroflexi TaxID=20... [more]
A0A382CZD6_9ZZZZ2.820e-5858.67PKS_ER domain-containing protein n=1 Tax=marine me... [more]
A0A2E2DV24_9CHLR3.880e-5862.00Alcohol dehydrogenase n=5 Tax=root TaxID=1 RepID=A... [more]
A0A7Z9S0U5_9BACT4.650e-5861.33Alcohol dehydrogenase (Fragment) n=1 Tax=Planctomy... [more]
A0A3D1YDH0_9CHLR2.190e-5757.33Alcohol dehydrogenase n=1 Tax=Dehalococcoidia bact... [more]
A0A3D5G0G5_9CHLR6.520e-5760.67PKS_ER domain-containing protein n=3 Tax=Chlorofle... [more]
A0A2E5J2U2_9CHLR1.240e-5662.67Alcohol dehydrogenase n=2 Tax=Chloroflexi TaxID=20... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52891contigP-wetherbeei_contig52891:91..540 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog247633.GP2143_12991
PFAMsADH_N,ADH_zinc_N
Model size450
Max annot lvl1236|Gammaproteobacteria
KEGG rclassRC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01715,RC01734,RC02273
KEGG koko:K00121
KEGG ReactionR00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R06983,R07105,R08281,R08306,R08310
KEGG Pathwayko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.27e-26
EggNOG OGsCOG1062@1|root,COG1062@2|Bacteria,1MUK4@1224|Proteobacteria,1S0H1@1236|Gammaproteobacteria,1JBTT@118884|unclassified Gammaproteobacteria
EC1.1.1.1,1.1.1.284
DescriptionZn-dependent alcohol dehydrogenases
Cds size450
COG categoryC
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186792.5761173-CDS-P-wetherbeei_contig52891:90..5401683186792.5761173-CDS-P-wetherbeei_contig52891:90..540Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig52891 91..540 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52891.1.1prot_P-wetherbeei_contig52891.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig52891 91..540 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig52891.1.1

>prot_P-wetherbeei_contig52891.1.1 ID=prot_P-wetherbeei_contig52891.1.1|Name=mRNA_P-wetherbeei_contig52891.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=150bp
MKTVAAVQTELGGKLLLEEIDLPDPGPDQVTVKLYSSGVCHSQLHQMHNP
GLGRPLLLGHEGTGVVTRVGKGVTHVKAGDLCIVTWVPRTPVRGPMAREM
TGATFKGQAAHGSVYTWARDVQTSKELVVPIPKEHPHDLSCIGGCAVLTG
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mRNA from alignment at P-wetherbeei_contig52891:91..540+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig52891.1.1 ID=mRNA_P-wetherbeei_contig52891.1.1|Name=mRNA_P-wetherbeei_contig52891.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig52891:91..540+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAAACCGTAGCCGCCGTGCAAACAGAGTTGGGTGGAAAGCTTCTTCT GGAAGAGATCGATCTTCCCGATCCTGGTCCGGACCAGGTCACCGTCAAGC TTTACTCGAGCGGCGTGTGCCATTCGCAGTTGCACCAGATGCACAATCCG GGCCTCGGCCGCCCGCTGCTGCTGGGTCATGAAGGTACGGGTGTCGTGAC CCGTGTCGGCAAGGGCGTGACGCATGTGAAGGCCGGAGACCTGTGCATCG TCACATGGGTGCCTCGGACACCCGTGCGCGGGCCGATGGCGCGGGAGATG ACGGGCGCCACGTTCAAGGGGCAGGCGGCGCACGGCAGTGTCTACACGTG GGCGCGCGATGTGCAGACCAGCAAGGAACTGGTCGTGCCGATTCCCAAGG AGCATCCGCACGACTTGAGCTGCATCGGCGGTTGCGCCGTTCTGACCGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig52891:91..540+

>mRNA_P-wetherbeei_contig52891.1.1 ID=mRNA_P-wetherbeei_contig52891.1.1|Name=mRNA_P-wetherbeei_contig52891.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig52891:91..540+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAAACCGTAGCCGCCGTGCAAACAGAGTTGGGTGGAAAGCTTCTTCT
GGAAGAGATCGATCTTCCCGATCCTGGTCCGGACCAGGTCACCGTCAAGC
TTTACTCGAGCGGCGTGTGCCATTCGCAGTTGCACCAGATGCACAATCCG
GGCCTCGGCCGCCCGCTGCTGCTGGGTCATGAAGGTACGGGTGTCGTGAC
CCGTGTCGGCAAGGGCGTGACGCATGTGAAGGCCGGAGACCTGTGCATCG
TCACATGGGTGCCTCGGACACCCGTGCGCGGGCCGATGGCGCGGGAGATG
ACGGGCGCCACGTTCAAGGGGCAGGCGGCGCACGGCAGTGTCTACACGTG
GGCGCGCGATGTGCAGACCAGCAAGGAACTGGTCGTGCCGATTCCCAAGG
AGCATCCGCACGACTTGAGCTGCATCGGCGGTTGCGCCGTTCTGACCGGC
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