mRNA_P-wetherbeei_contig52852.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52852.1.1 vs. uniprot
Match: A0A3D4BA95_9BACT (Nitrite reductase n=1 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A3D4BA95_9BACT) HSP 1 Score: 163 bits (412), Expect = 1.360e-49 Identity = 69/124 (55.65%), Postives = 93/124 (75.00%), Query Frame = 1
Query: 1 MTEVSVGREDAFADPGRKVIEVGGIEVGVFKFKGAFTAFENLCPHLGGPVCQGLMLPRTVDDVAQDNVNLARSFSKTQHNVICPWHGMEFDVSTGEHVTTKTLRLRKVAVRVEDGEVFITVPDR 372
M E+++G+ +F DPGR+V+E+ GI++GVF+ G F A+EN CPHLGGP CQG +LPR ++DVA+D + R FS+ Q N+ICPWHG EFD+ TG HV RLR V+VR E GEVFIT+P++
Sbjct: 1 MPEINIGQVASFEDPGRRVVEIAGIQIGVFQLDGEFYAYENTCPHLGGPACQGKILPRVLEDVAEDKKSAGRVFSRNQLNIICPWHGFEFDIRTGAHVVVAKYRLRPVSVRTERGEVFITLPEK 124
BLAST of mRNA_P-wetherbeei_contig52852.1.1 vs. uniprot
Match: A0A2E6NHA9_9BACT (Nitrite reductase n=3 Tax=root TaxID=1 RepID=A0A2E6NHA9_9BACT) HSP 1 Score: 157 bits (397), Expect = 2.610e-47 Identity = 69/124 (55.65%), Postives = 91/124 (73.39%), Query Frame = 1
Query: 1 MTEVSVGREDAFADPGRKVIEVGGIEVGVFKFKGAFTAFENLCPHLGGPVCQGLMLPRTVDDVAQDNVNLARSFSKTQHNVICPWHGMEFDVSTGEHVTTKTLRLRKVAVRVEDGEVFITVPDR 372
M+E+++G +F DP R+VIE+ G++VGVF+ G F A+EN CPHLGGP CQG +LPR ++DV ++ +L R F++ Q NVICPWHG EFD+ TG HV RLR VAVR E GEVFIT+P +
Sbjct: 1 MSEINIGTVASFDDPSRRVIEIAGMQVGVFRLDGEFYAYENKCPHLGGPACQGKILPRVLEDVRENKKSLGRVFAQNQLNVICPWHGFEFDIRTGAHVAVPKYRLRPVAVRTEGGEVFITLPKK 124
BLAST of mRNA_P-wetherbeei_contig52852.1.1 vs. uniprot
Match: A0A2E4W3G6_9BACT (Nitrite reductase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E4W3G6_9BACT) HSP 1 Score: 154 bits (388), Expect = 6.120e-46 Identity = 63/122 (51.64%), Postives = 89/122 (72.95%), Query Frame = 1
Query: 1 MTEVSVGREDAFADPGRKVIEVGGIEVGVFKFKGAFTAFENLCPHLGGPVCQGLMLPRTVDDVAQDNVNLARSFSKTQHNVICPWHGMEFDVSTGEHVTTKTLRLRKVAVRVEDGEVFITVP 366
M EV++G+ +F DPGR+V+E+G +++GVF+ G F A+EN CPHLGGP CQG +LPR ++ VA+D + R FS+ Q N+ICPWHG EFD+ TG+HV RLR V +R G+V++T+P
Sbjct: 1 MPEVNIGKASSFQDPGRRVVEIGSVQIGVFQLDGKFYAYENRCPHLGGPACQGKILPRVLEAVAEDKKSAGRVFSRDQLNIICPWHGFEFDIRTGKHVAISKYRLRPVPIRTGGGDVYVTLP 122
BLAST of mRNA_P-wetherbeei_contig52852.1.1 vs. uniprot
Match: A0A1Q4B9V7_9HYPH (Rieske domain-containing protein n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1Q4B9V7_9HYPH) HSP 1 Score: 153 bits (386), Expect = 1.020e-45 Identity = 69/121 (57.02%), Postives = 85/121 (70.25%), Query Frame = 1
Query: 1 MTEVSVGREDAFADPGRKVIEVGGIEVGVFKFKGAFTAFENLCPHLGGPVCQGLMLPRTVDDVAQDNVNLARSFSKTQHNVICPWHGMEFDVSTGEHVTTKTLRLRKVAVRVEDGEVFITV 363
M+EV+VG +F DPGRKV EVGG EVGVF G F A+EN CPHL GP CQG +LP + V D + R FSK N++CPWHGMEFD+ TG H T + +RLRKV VRVE GE+++T+
Sbjct: 1 MSEVNVGPASSFTDPGRKVFEVGGQEVGVFLLGGEFYAWENRCPHLDGPACQGRLLPLATEAVNADRTSRGREFSKEHMNIVCPWHGMEFDIRTGRHPTNQAIRLRKVPVRVERGEIYVTL 121
BLAST of mRNA_P-wetherbeei_contig52852.1.1 vs. uniprot
Match: A0A381TYT6_9ZZZZ (Rieske domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A381TYT6_9ZZZZ) HSP 1 Score: 150 bits (379), Expect = 1.430e-44 Identity = 62/122 (50.82%), Postives = 89/122 (72.95%), Query Frame = 1
Query: 1 MTEVSVGREDAFADPGRKVIEVGGIEVGVFKFKGAFTAFENLCPHLGGPVCQGLMLPRTVDDVAQDNVNLARSFSKTQHNVICPWHGMEFDVSTGEHVTTKTLRLRKVAVRVEDGEVFITVP 366
M+EV++G+ +F DPGR+V+E+ GI++GVF+ G F A+EN CPHLGGP CQG +LPR ++ V++D + R FS++ NV+CPWHG EFD+ TG HV RLR+V+VR + VF+ +P
Sbjct: 1 MSEVNIGKISSFEDPGRRVVEINGIQIGVFRLDGEFYAYENRCPHLGGPACQGKLLPRVLEAVSKDRKSEGRVFSRSDMNVVCPWHGFEFDIRTGAHVVISRYRLRRVSVRTDQENVFLALP 122
BLAST of mRNA_P-wetherbeei_contig52852.1.1 vs. uniprot
Match: A0A3N5N4U8_9HYPH (Rieske (2Fe-2S) protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A3N5N4U8_9HYPH) HSP 1 Score: 145 bits (365), Expect = 2.970e-42 Identity = 66/123 (53.66%), Postives = 86/123 (69.92%), Query Frame = 1
Query: 1 MTEVSVGREDAFADPGRKVIEVGGIEVGVFKFKGAFTAFENLCPHLGGPVCQGLMLPRTVDDVAQDNVNLARSFSKTQHNVICPWHGMEFDVSTGEHVTTKTLRLRKVAVRVEDGEVFITVPD 369
M E+++G+ F +PGRKVIEV G+ VGVF G FTAFEN+CPH+GGPVCQG ++ R + VA D +L SFS Q NV+CPWHG EFD+S+G H LRLR V + V D +V I++P+
Sbjct: 1 MREIAIGKVATFPNPGRKVIEVDGVAVGVFCRNGTFTAFENVCPHMGGPVCQGKLIARVQELVADDKTSLGFSFSPEQTNVVCPWHGYEFDISSGRHQGDPRLRLRPVKITVVDDDVVISLPE 123
BLAST of mRNA_P-wetherbeei_contig52852.1.1 vs. uniprot
Match: A0A1H1I9D2_9HYPH (Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase n=3 Tax=unclassified Hyphomicrobiales TaxID=41292 RepID=A0A1H1I9D2_9HYPH) HSP 1 Score: 140 bits (353), Expect = 1.290e-40 Identity = 61/124 (49.19%), Postives = 84/124 (67.74%), Query Frame = 1
Query: 1 MTEVSVGREDAFADPGRKVIEVGGIEVGVFKFKGAFTAFENLCPHLGGPVCQGLMLPRTVDDVAQDNVNLARSFSKTQHNVICPWHGMEFDVSTGEHVTTKTLRLRKVAVRVEDGEVFITVPDR 372
MT++SVG A A R V+E+ G+ +G++ GAFTAF N CPH+GGPVCQG ++PRT++ + D +L +FSKT +++CPWHG EFD +G H LRL V VRV GEV +T+P+R
Sbjct: 1 MTDISVGSSAALAKRQRIVVEIDGVSIGIYHRDGAFTAFLNRCPHMGGPVCQGKLMPRTLERIGADGGSLGLAFSKTDEHIVCPWHGYEFDTRSGRHPANPRLRLTPVPVRVAAGEVIVTLPER 124
BLAST of mRNA_P-wetherbeei_contig52852.1.1 vs. uniprot
Match: A0A6L5FGV9_9HYPH (Rieske 2Fe-2S domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FGV9_9HYPH) HSP 1 Score: 135 bits (340), Expect = 1.300e-38 Identity = 61/124 (49.19%), Postives = 82/124 (66.13%), Query Frame = 1
Query: 1 MTEVSVGREDAFADPGRKVIEVGGIEVGVFKFKGAFTAFENLCPHLGGPVCQGLMLPRTVDDVAQDNVNLARSFSKTQHNVICPWHGMEFDVSTGEHVTTKTLRLRKVAVRVE-DGEVFITVPD 369
M E+++G F DPGRK+I G+EVGVFK AFTA+ N CPH+GGP CQG ++ + + +A D + FSKTQ N++CPWHG EFD+ TG H +RLR V V + DG+V +T+PD
Sbjct: 1 MRELNIGPASEFDDPGRKIIAFDGVEVGVFKLGDAFTAYFNHCPHMGGPACQGKIIAKVDEAIAPDRTSKGMIFSKTQTNMVCPWHGYEFDIRTGVHPGNARMRLRPVKVHLSTDGDVIVTLPD 124
BLAST of mRNA_P-wetherbeei_contig52852.1.1 vs. uniprot
Match: A0A6N7F6S9_9PROT (Rieske 2Fe-2S domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7F6S9_9PROT) HSP 1 Score: 132 bits (333), Expect = 1.110e-37 Identity = 57/121 (47.11%), Postives = 82/121 (67.77%), Query Frame = 1
Query: 1 MTEVSVGREDAFADPGRKVIEVGGIEVGVFKFKGAFTAFENLCPHLGGPVCQGLMLPRTVDDVAQDNVNLARSFSKTQHNVICPWHGMEFDVSTGEHVTTKTLRLRKVAVRVEDGEVFITV 363
MT++ VG ED F D GRKVI G +E+GVF+ G F A+EN CPH GGPVCQG +L R ++ + +D + +++ +++CPWHG EF++ TG H K +RLR V+V+DGEV++ V
Sbjct: 1 MTDIFVGNEDEFKDRGRKVIAHGDLEIGVFRLDGGFYAYENRCPHQGGPVCQGRVLNRVMEVLGEDKTSQGLKWAEEDVHIVCPWHGFEFNIKTGRHPGAKGVRLRPYDVKVKDGEVYVVV 121
BLAST of mRNA_P-wetherbeei_contig52852.1.1 vs. uniprot
Match: UPI0016645D27 (Rieske (2Fe-2S) protein n=1 Tax=Aureimonas glaciei TaxID=1776957 RepID=UPI0016645D27) HSP 1 Score: 129 bits (324), Expect = 2.930e-36 Identity = 55/121 (45.45%), Postives = 78/121 (64.46%), Query Frame = 1
Query: 1 MTEVSVGREDAFADPGRKVIEVGGIEVGVFKFKGAFTAFENLCPHLGGPVCQGLMLPRTVDDVAQDNVNLARSFSKTQHNVICPWHGMEFDVSTGEHVTTKTLRLRKVAVRVEDGEVFITV 363
M E VGR+D FAD ++++ VGG+EVG+F+ G + N+CPH GGPVCQG + R +D + + R++ + N++CPWHG EFD+ TG H T LRLR VA + DGEV++ V
Sbjct: 1 MPEFRVGRQDEFADGDKRLMIVGGVEVGLFRLDGDIFCWRNICPHQGGPVCQGQVFRRVLDVIDESGQQRGRTYHDSDKNIVCPWHGAEFDIRTGRHAGTGRLRLRAVATEIRDGEVYLHV 121 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52852.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52852.1.1 >prot_P-wetherbeei_contig52852.1.1 ID=prot_P-wetherbeei_contig52852.1.1|Name=mRNA_P-wetherbeei_contig52852.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=124bp MTEVSVGREDAFADPGRKVIEVGGIEVGVFKFKGAFTAFENLCPHLGGPVback to top mRNA from alignment at P-wetherbeei_contig52852:39..410- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52852.1.1 ID=mRNA_P-wetherbeei_contig52852.1.1|Name=mRNA_P-wetherbeei_contig52852.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=372bp|location=Sequence derived from alignment at P-wetherbeei_contig52852:39..410- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52852:39..410- >mRNA_P-wetherbeei_contig52852.1.1 ID=mRNA_P-wetherbeei_contig52852.1.1|Name=mRNA_P-wetherbeei_contig52852.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=372bp|location=Sequence derived from alignment at P-wetherbeei_contig52852:39..410- (Phaeothamnion wetherbeei SAG_119_79)back to top |