mRNA_P-wetherbeei_contig5277.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5277.2.1 vs. uniprot
Match: D8LE19_ECTSI (Rab28, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE19_ECTSI) HSP 1 Score: 208 bits (530), Expect = 8.940e-66 Identity = 97/141 (68.79%), Postives = 113/141 (80.14%), Query Frame = 1
Query: 1 QFKVILLGDGTVGKTSIAARFTQDDFTSSYKQTIGLDFFTKAVAL--------QVWDIGGQSIGSKMIGTYVAGTHAVVLCYDITNYDSFQDLDDWFCIVRRAFGGSAMPYVALVGNKCDLSHMRAVRSEAAHQFADENDM 399
Q+KVILLGDGTVGKTSIA RF Q DF+ YKQTIGLDFF K + L Q+WDIGGQSIGSKM+ Y+ G HAV++CYDITNYDSFQDLDDW+ +V + F MPYVA+VGNKCDLSHMRAVR+ +AHQFAD+N+M
Sbjct: 28 QYKVILLGDGTVGKTSIATRFAQGDFSQMYKQTIGLDFFVKRILLPGDVQVTMQIWDIGGQSIGSKMMSKYIFGAHAVIMCYDITNYDSFQDLDDWYRLVVKTFEKGVMPYVAMVGNKCDLSHMRAVRTTSAHQFADDNNM 168
BLAST of mRNA_P-wetherbeei_contig5277.2.1 vs. uniprot
Match: A0A7S0HTS2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HTS2_9EUKA) HSP 1 Score: 204 bits (518), Expect = 4.760e-64 Identity = 98/141 (69.50%), Postives = 112/141 (79.43%), Query Frame = 1
Query: 1 QFKVILLGDGTVGKTSIAARFTQDDFTSSYKQTIGLDFFTKA--------VALQVWDIGGQSIGSKMIGTYVAGTHAVVLCYDITNYDSFQDLDDWFCIVRRAFGGSAMPYVALVGNKCDLSHMRAVRSEAAHQFADENDM 399
Q+KVILLGDG VGKTSIA RFT+D F +YKQTIG+DFF K VALQ+WDIGGQ+IG KMIG Y+ G AV+LCYDITNY SFQ+L+DWF +VRR F GSAMPYV LVGNK DL+HMRAV++E QFADENDM
Sbjct: 24 QYKVILLGDGAVGKTSIAMRFTEDHFAKAYKQTIGVDFFIKRLVLPGEVHVALQIWDIGGQTIGGKMIGNYIYGAQAVLLCYDITNYQSFQNLEDWFRLVRRTFQGSAMPYVTLVGNKTDLNHMRAVKAEKHSQFADENDM 164
BLAST of mRNA_P-wetherbeei_contig5277.2.1 vs. uniprot
Match: A0A7S2XY86_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY86_9STRA) HSP 1 Score: 196 bits (499), Expect = 1.040e-61 Identity = 93/141 (65.96%), Postives = 110/141 (78.01%), Query Frame = 1
Query: 1 QFKVILLGDGTVGKTSIAARFTQDDFTSSYKQTIGLDFFTKA--------VALQVWDIGGQSIGSKMIGTYVAGTHAVVLCYDITNYDSFQDLDDWFCIVRRAFGGSAMPYVALVGNKCDLSHMRAVRSEAAHQFADENDM 399
QFKVI+LGDG VGKTSIA RFT + F+ +YKQTIGLDFF K VALQ+WDIGGQS+GSKMI Y+ G HAV+LCYDITNYDSFQ+L+DW+ +VRR F MPYV LV NK DL+HMRAVR + +QFADEN++
Sbjct: 24 QFKVIILGDGAVGKTSIAMRFTDNSFSKAYKQTIGLDFFIKKLILPGDVHVALQIWDIGGQSMGSKMIHNYIFGAHAVLLCYDITNYDSFQNLEDWYRLVRRTFARDTMPYVGLVANKSDLNHMRAVRQDVHNQFADENEL 164
BLAST of mRNA_P-wetherbeei_contig5277.2.1 vs. uniprot
Match: A0A8J5XV08_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XV08_DIALT) HSP 1 Score: 194 bits (493), Expect = 2.390e-60 Identity = 94/139 (67.63%), Postives = 105/139 (75.54%), Query Frame = 1
Query: 4 FKVILLGDGTVGKTSIAARFTQDDFTSSYKQTIGLDFFTK--------AVALQVWDIGGQSIGSKMIGTYVAGTHAVVLCYDITNYDSFQDLDDWFCIVRRAFGGSAMPYVALVGNKCDLSHMRAVRSEAAHQFADEND 396
+KVILLGDG VGKTSIA RF+QD F SYKQTIG+DFF K VALQ+WDIGGQSIG KMIG Y+ G HAV+LCYDITNY SFQD++DW +VRR F MP VALVGNK DL+HMR VRS +QF DEND
Sbjct: 21 YKVILLGDGAVGKTSIAMRFSQDHFAQSYKQTIGVDFFHKHIELPNGQRVALQIWDIGGQSIGGKMIGNYIYGAHAVLLCYDITNYQSFQDVEDWLRLVRRTFANETMPLVALVGNKVDLAHMRTVRSTKHNQFCDEND 159
BLAST of mRNA_P-wetherbeei_contig5277.2.1 vs. uniprot
Match: A0A6H5JPJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ9_9PHAE) HSP 1 Score: 194 bits (493), Expect = 3.790e-59 Identity = 95/148 (64.19%), Postives = 111/148 (75.00%), Query Frame = 1
Query: 7 KVILLGDGTVGKTSIAARFTQDDFTSSYKQTIGLDFFTKAVAL--------QVWDIGGQSIGSKMIGTYVAGTH---------AVVLCYDITNYDSFQDLDDWFCIVRRAFGGSAMPYVALVGNKCDLSHMRAVRSEAAHQFADENDM 399
KVILLGDGTVGKTSIA RF Q DF+ YKQTIGLDFF K + L QVWDIGGQSIGSKM+ Y+ G H AV++CYDITNYDSFQ+LDDW+ +V + F MPYVA+VGNKCDLSHMRAVR+ +AH+FAD+N+M
Sbjct: 101 KVILLGDGTVGKTSIATRFAQGDFSQMYKQTIGLDFFVKRILLPGDVQVTMQVWDIGGQSIGSKMMSKYIFGAHVRSGGTGLIAVIMCYDITNYDSFQNLDDWYRLVVKTFEKGVMPYVAMVGNKCDLSHMRAVRTTSAHRFADDNNM 248
BLAST of mRNA_P-wetherbeei_contig5277.2.1 vs. uniprot
Match: A0A813DPM1_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DPM1_POLGL) HSP 1 Score: 191 bits (484), Expect = 6.860e-59 Identity = 90/141 (63.83%), Postives = 108/141 (76.60%), Query Frame = 1
Query: 1 QFKVILLGDGTVGKTSIAARFTQDDFTSSYKQTIGLDFFTKAVAL--------QVWDIGGQSIGSKMIGTYVAGTHAVVLCYDITNYDSFQDLDDWFCIVRRAFGGSAMPYVALVGNKCDLSHMRAVRSEAAHQFADENDM 399
Q+KVILLGDG VGKTS+A RF +D F YKQTIGLDFF K V L Q+WDIGGQSIG KM+ Y+ G++AVVLCYDITNY+SFQ L+DW +V+R FG S +PYVAL+GNK DL+HMRAV+ + QFADEND+
Sbjct: 23 QYKVILLGDGAVGKTSLATRFCEDHFAKQYKQTIGLDFFVKRVVLPGDVHVCLQIWDIGGQSIGGKMVSNYIHGSNAVVLCYDITNYESFQHLEDWLFLVKRTFGESPLPYVALMGNKHDLAHMRAVKVDKHTQFADENDL 163
BLAST of mRNA_P-wetherbeei_contig5277.2.1 vs. uniprot
Match: A0A7S0P625_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P625_9EUKA) HSP 1 Score: 191 bits (485), Expect = 7.860e-59 Identity = 91/141 (64.54%), Postives = 108/141 (76.60%), Query Frame = 1
Query: 1 QFKVILLGDGTVGKTSIAARFTQDDFTSSYKQTIGLDFFTKA--------VALQVWDIGGQSIGSKMIGTYVAGTHAVVLCYDITNYDSFQDLDDWFCIVRRAFGGSAMPYVALVGNKCDLSHMRAVRSEAAHQFADENDM 399
Q+KVILLGDG VGKTSIA RFT+D F +YKQTIGLDFF K VALQ+WDIGGQ+IG KMI Y+ G AV+LCYDITNY++FQ+L+DWF +VRR F MPYV L GNK DL+HMRAV+ E +QFA+EN+M
Sbjct: 35 QYKVILLGDGAVGKTSIAMRFTEDHFAKTYKQTIGLDFFIKRLVLPGDVNVALQIWDIGGQTIGGKMISNYIYGAQAVLLCYDITNYETFQNLEDWFRLVRRTFSQGNMPYVVLAGNKTDLNHMRAVKLEKHNQFAEENEM 175
BLAST of mRNA_P-wetherbeei_contig5277.2.1 vs. uniprot
Match: A0A7S1CBI3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBI3_9STRA) HSP 1 Score: 188 bits (477), Expect = 1.010e-57 Identity = 91/141 (64.54%), Postives = 108/141 (76.60%), Query Frame = 1
Query: 1 QFKVILLGDGTVGKTSIAARFTQDDFTSSYKQTIGLDFFTKA--------VALQVWDIGGQSIGSKMIGTYVAGTHAVVLCYDITNYDSFQDLDDWFCIVRRAFGGSAMPYVALVGNKCDLSHMRAVRSEAAHQFADENDM 399
Q+KVILLGDG VGKTSIAARFT D F+ YKQTIGLDFF K VALQ+WDIGGQSIG KMI Y+ G AV+LCYD+TNY SFQ+L+DW+ +V++ AMPYVALVGNK DL+HMRAV+ + + F+DENDM
Sbjct: 23 QYKVILLGDGAVGKTSIAARFTNDYFSKMYKQTIGLDFFIKRLVLPGDIHVALQIWDIGGQSIGGKMIKNYIYGAQAVLLCYDVTNYASFQNLEDWYRLVQQTHAADAMPYVALVGNKTDLNHMRAVKLDKHNLFSDENDM 163
BLAST of mRNA_P-wetherbeei_contig5277.2.1 vs. uniprot
Match: A0A835YXE0_9STRA (Rab28, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE0_9STRA) HSP 1 Score: 187 bits (476), Expect = 1.020e-57 Identity = 91/143 (63.64%), Postives = 111/143 (77.62%), Query Frame = 1
Query: 1 QFKVILLGDGTVGKTSIAARFTQDDFTSSYKQTIGLDFFTK--------AVALQVWDIGGQSIGSKMIGTYVAGTHAVVLCYDITNYDSFQDLDDWFCIVRRAFGGSAMPYVALVGNKCDLSHMRAVRSEAAHQFADENDMQV 405
QFK+ILLGDG VGKTSIA RF ++ F+ SYKQTIGLDFF K +VALQ+WDIGGQSIGSKM+G Y+ G+HAV+ CYD+TN DSF DL+DW +V ++ P +AL GNKCDLSH+RAVRSEA + FAD++DMQV
Sbjct: 17 QFKIILLGDGAVGKTSIANRFAKESFSQSYKQTIGLDFFIKRIVLPGDISVALQLWDIGGQSIGSKMLGNYIHGSHAVIFCYDVTNADSFLDLEDWRSLVMKS-AADDKPVMALAGNKCDLSHIRAVRSEAINTFADKHDMQV 158
BLAST of mRNA_P-wetherbeei_contig5277.2.1 vs. uniprot
Match: A0A7S1ABN2_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1ABN2_NOCSC) HSP 1 Score: 187 bits (474), Expect = 2.120e-57 Identity = 87/141 (61.70%), Postives = 106/141 (75.18%), Query Frame = 1
Query: 1 QFKVILLGDGTVGKTSIAARFTQDDFTSSYKQTIGLDFFTKA--------VALQVWDIGGQSIGSKMIGTYVAGTHAVVLCYDITNYDSFQDLDDWFCIVRRAFGGSAMPYVALVGNKCDLSHMRAVRSEAAHQFADENDM 399
QFK+ILLGDG VGKTS+A RF +D F YKQTIGLDFF K V LQ+WDIGGQSIG KMI Y+ G+HAV+LCYDITNY SFQ L+DW +V+R F +MPY+AL+ NK DL+H+RAV+ + +QFADEND+
Sbjct: 21 QFKIILLGDGAVGKTSLAMRFCEDYFAKQYKQTIGLDFFIKRIVLPGDVHVCLQIWDIGGQSIGGKMISNYIHGSHAVILCYDITNYQSFQHLEDWLFLVKRTFDSGSMPYMALMANKHDLAHIRAVKPDKHNQFADENDL 161 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5277.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5277.2.1 >prot_P-wetherbeei_contig5277.2.1 ID=prot_P-wetherbeei_contig5277.2.1|Name=mRNA_P-wetherbeei_contig5277.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=136bp QFKVILLGDGTVGKTSIAARFTQDDFTSSYKQTIGLDFFTKAVALQVWDIback to top mRNA from alignment at P-wetherbeei_contig5277:248..919+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5277.2.1 ID=mRNA_P-wetherbeei_contig5277.2.1|Name=mRNA_P-wetherbeei_contig5277.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=672bp|location=Sequence derived from alignment at P-wetherbeei_contig5277:248..919+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5277:248..919+ >mRNA_P-wetherbeei_contig5277.2.1 ID=mRNA_P-wetherbeei_contig5277.2.1|Name=mRNA_P-wetherbeei_contig5277.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=408bp|location=Sequence derived from alignment at P-wetherbeei_contig5277:248..919+ (Phaeothamnion wetherbeei SAG_119_79)back to top |