mRNA_P-wetherbeei_contig52762.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig52762.1.1
Unique NamemRNA_P-wetherbeei_contig52762.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig52762.1.1 vs. uniprot
Match: A0A7V9VWS1_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9VWS1_9CHLR)

HSP 1 Score: 194 bits (494), Expect = 2.800e-58
Identity = 92/179 (51.40%), Postives = 125/179 (69.83%), Query Frame = 1
Query:    1 PYGGSTDTAALAKRLDAAGIEHRWSDSRFRFTHAKYIVVDRQVAIIMNMNLTVSAFKGNREFGAISTEPALVNEAQAIFDGDWNGDPVEHPDGPLILSPTNSRQRFLDLIGGADRSIDLYVEVINDPDLINELGYAAQAGIRVRLIVNAPESDSVRSVYAAMARSGVEVRVLRRLYVHA 537
            P+GG      + +RL+  GIE RWS S  RF+HAKYIV+DRQ A+ MN NLT SAF  NREFG  +T+ A V +AQ +FD DW+ +P++ PDGPLI+SPTNSR R+L+LIGGA+RSID Y EVI D ++++ +  AA  G++VRLIV+A   +  +     +  SG E+R+   LY+HA
Sbjct:  111 PFGGGGGQIEVRERLELLGIEVRWSASDIRFSHAKYIVIDRQTALFMNQNLTASAFTSNREFGVTTTDRASVAQAQTVFDRDWDHEPLDDPDGPLIVSPTNSRARYLELIGGAERSIDFYAEVIRDVEIVDAIEDAAARGVQVRLIVDASFDEVTQEFAILLYNSGAEIRLAETLYIHA 289          
BLAST of mRNA_P-wetherbeei_contig52762.1.1 vs. uniprot
Match: A0A7V8WQZ8_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V8WQZ8_9CHLR)

HSP 1 Score: 171 bits (432), Expect = 5.520e-49
Identity = 89/181 (49.17%), Postives = 116/181 (64.09%), Query Frame = 1
Query:    1 PYGGSTDTAALAKRLDAAGIEHRWSDSRFRFTHAKYIVVDRQVAIIMNMNLTVSAFKGNREFGAISTEPALVNEAQAIFDGDWNGDPVEHPDGP--LILSPTNSRQRFLDLIGGADRSIDLYVEVINDPDLINELGYAAQAGIRVRLIVNAPESDSVRSVYAAMARSGVEVRVLRRLYVHA 537
            P+GG  D    A  L AAGI  RW   RFRFTHAKY V+D + ++I+N NLT S+F+ NREFG IST  A V EA+ IFD DW G P   P GP  LI+SP NSR R  +LI GA RS+DLY EV+ DP ++ EL  A + G+ VRL++     ++  +    + + GV+VR+L  +YVHA
Sbjct:  111 PFGGGGDQPGSAAELRAAGISVRWGQDRFRFTHAKYAVIDARTSLILNQNLTRSSFERNREFGVISTVAADVREARTIFDADWEGRP---PSGPFALIVSPDNSRVRLGELINGAQRSLDLYAEVVRDPAMLAELTEAERRGVSVRLMLTDENDEANLTAATRLIQGGVDVRLLDHVYVHA 288          
BLAST of mRNA_P-wetherbeei_contig52762.1.1 vs. uniprot
Match: A0A7V9SCY7_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9SCY7_9CHLR)

HSP 1 Score: 158 bits (400), Expect = 5.690e-44
Identity = 80/179 (44.69%), Postives = 114/179 (63.69%), Query Frame = 1
Query:    1 PYGGSTDTAALAKRLDAAGIEHRWSDSRFRFTHAKYIVVDRQVAIIMNMNLTVSAFKGNREFGAISTEPALVNEAQAIFDGDWNGDPVEHPDGPLILSPTNSRQRFLDLIGGADRSIDLYVEVINDPDLINELGYAAQAGIRVRLIVNAPESDSVRSVYAAMARSGVEVRVLRRLYVHA 537
            P+GG      +  RL+ AGI  RW +  FRFTH K +VVD  VAIIMN N+T SAF  NR+FG ++T+P  V  A A+F+ DW   P   P  PL++SPTN+R   L++I GA RS+++Y EV+ DP+L+  +  A   G+ VRLIV+   S+   +  +A+A  GV++R+   LY+HA
Sbjct:  138 PFGGDGRQDEIFVRLEQAGIAVRWGNPVFRFTHIKTLVVDSAVAIIMNQNITESAFTSNRDFGVVTTQPEAVRTAAALFEADWARGPEPDP-LPLVVSPTNARALLLEMIAGARRSLEIYAEVLRDPELLAAIAAAEARGVTVRLIVS--PSEEFAAERSALAAGGVDIRLASSLYIHA 313          
BLAST of mRNA_P-wetherbeei_contig52762.1.1 vs. uniprot
Match: A0A7V9VGK1_9CHLR (Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9VGK1_9CHLR)

HSP 1 Score: 157 bits (398), Expect = 6.240e-44
Identity = 78/178 (43.82%), Postives = 112/178 (62.92%), Query Frame = 1
Query:    4 YGGSTDTAALAKRLDAAGIEHRWSDSRFRFTHAKYIVVDRQVAIIMNMNLTVSAFKGNREFGAISTEPALVNEAQAIFDGDWNGDPVEHPDGPLILSPTNSRQRFLDLIGGADRSIDLYVEVINDPDLINELGYAAQAGIRVRLIVNAPESDSVRSVYAAMARSGVEVRVLRRLYVHA 537
            +GG  DT      + A GIE ++    FRF+HAKYIVVD  V II N NLT S+F+ NRE G I+T+  +V    A+F+ DW+G+ ++     L++SP NSR+  +DL+  A++ I LYVEVI D +++  L  A   G+ VRL+VNAP  D    V  A+A+ GV++RV   +Y+HA
Sbjct:   73 FGGQVDTL---DEISALGIEVKYGPDAFRFSHAKYIVVDGAVGIITNQNLTYSSFESNREVGVITTDTEVVRSLAAVFEADWSGNSLDDIADRLVVSPENSRESLVDLLASAEQDIRLYVEVIRDDEIVAGLNDAVARGVDVRLVVNAPNDDLDFEVLGALAKGGVDIRVADHIYIHA 247          
BLAST of mRNA_P-wetherbeei_contig52762.1.1 vs. uniprot
Match: A0A7W1I3S3_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W1I3S3_9CHLR)

HSP 1 Score: 153 bits (387), Expect = 2.270e-43
Identity = 87/182 (47.80%), Postives = 114/182 (62.64%), Query Frame = 1
Query:    1 PYGGSTDTAALAKRLDAAGIEHRWSDSRFRFTHAKYIVVDRQVAIIMNMNLTVSAFKGNREFGAISTEPALVNEAQAIFDGDWNGDPVEHPDGPLILSPTNSRQRFLDLIGGADRSIDLYVEVINDPDLINELGYAAQAGIRVRLIVNAP--ESDSVRSVYAAMARSGVEVRVLRR-LYVHA 537
            P+GG+     +  RL AAGI  RW++  FRF+H K ++VD +  +IMN NLT S+F GNREFG ++T P+ V  A AIF+ DWN    E   GPLI+SPT SRQ  LDLI  A RSID+Y EV+ D  ++  L  AA  G+RVRLI++     SD      A +  +GVE R+ R  LY+HA
Sbjct:    9 PFGGAGTQDEVFARLHAAGIMVRWNNPTFRFSHIKAMIVDDRALLIMNQNLTNSSFTGNREFGVLTTRPSDVAHAAAIFEADWNRT-AEPAGGPLIVSPTTSRQTLLDLITTAQRSIDIYAEVMRDRAVVEALKAAAGRGVRVRLIMSGSLDGSDDNGVERAELRAAGVETRLARGGLYIHA 189          
BLAST of mRNA_P-wetherbeei_contig52762.1.1 vs. uniprot
Match: A0A7V9HKT4_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9HKT4_9CHLR)

HSP 1 Score: 151 bits (381), Expect = 3.220e-41
Identity = 80/179 (44.69%), Postives = 108/179 (60.34%), Query Frame = 1
Query:    1 PYGGSTDTAALAKRLDAAGIEHRWSDSRFRFTHAKYIVVDRQVAIIMNMNLTVSAFKGNREFGAISTEPALVNEAQAIFDGDWNGDPVEHPDGPLILSPTNSRQRFLDLIGGADRSIDLYVEVINDPDLINELGYAAQAGIRVRLIVNAPESDSVRSVYAAMARSGVEVRVLRRLYVHA 537
            P+GG+     L  RL A GI  RW D  FRFTH K  +VD +VAIIMN NLT SAF  NRE G I+T P  V    AIF+ DW+    E   GPLI+SP NSR   L LI  A  ++D+Y EV+ D +L+  +  A + G+ VRL+++   +D      A +A +GV++R+L  +Y+HA
Sbjct:  130 PFGGAGGQPELFSRLQATGIAVRWGDPVFRFTHIKTAIVDDRVAIIMNQNLTYSAFTSNRELGVITTRPGDVAAVIAIFEADWHRT-GEVDAGPLIVSPANSRVELLGLINRARVTLDIYAEVVRDEELLGAIVAAVERGVAVRLVMSGDPADHNAEDRAWLAAAGVQIRLLSEVYIHA 307          
BLAST of mRNA_P-wetherbeei_contig52762.1.1 vs. uniprot
Match: A0A7V9VEB0_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9VEB0_9CHLR)

HSP 1 Score: 147 bits (370), Expect = 8.700e-40
Identity = 83/183 (45.36%), Postives = 112/183 (61.20%), Query Frame = 1
Query:    1 PYGGSTDTAALAKRLDAAGIEHRWSDSRFRFTHAKYIVVDRQVAIIMNMNLTVSAFKGNREFGAISTEPALVNEAQAIFDGDWN--GDPVEHPDGPLILSPTNSRQRFLDLIGGADRSIDLYVEVINDPDLINELGYAAQAGIRVRLIVNAPESDSVR--SVYAAMARSGVEVRVLRRLYVHA 537
            P+GG+        RL AAG   +WS+  FRF+H K  V+D  VAIIMN+NL+ SAF  NREF AI+T    V EA AIFD DW+  G+P   P GPL++SPT+SR   L LI GA  ++DLY EV+ D  ++  L  A   G+ VRL+++    D  R  +    +A +GVE+R  R +Y+HA
Sbjct:  105 PFGGNGLNPETFDRLAAAGARVQWSNPAFRFSHVKMFVIDDAVAIIMNLNLSRSAFIDNREFAAITTRQDAVAEAAAIFDADWDRTGEP---PPGPLVISPTDSRATLLGLIDGAGVTLDLYAEVMRDEAVLIALERAEDRGVAVRLVMSPEYGDDDRGKAERERLAAAGVEIRYARGVYIHA 284          
BLAST of mRNA_P-wetherbeei_contig52762.1.1 vs. uniprot
Match: A0A6J4UPW5_9CHLR (Cardiolipin synthetase n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4UPW5_9CHLR)

HSP 1 Score: 141 bits (356), Expect = 1.250e-37
Identity = 79/181 (43.65%), Postives = 106/181 (58.56%), Query Frame = 1
Query:    1 PYGGSTDTAALAKRLDAAGIEHRWSDSRFRFTHAKYIVVDRQVAIIMNMNLTVSAFKGNREFGAISTEPALVNEAQAIFDGDWNGDPVEHPDGPLILSPTNSRQRFLDLIGGADRSIDLYVEVINDPDLINELGYAAQAGIRVRLIVNAPESDSVR--SVYAAMARSGVEVRVLRRLYVHA 537
            P+GG+        RLDAAG   +WS+  FRF+H K  V+D  VAIIMN+NL+ SAF  NREF A++T    V EA AIF  DW       P GPLI+SP +SR   + LI  A  S+D+Y EV+ D  ++  +  A   G+ VRL+++    D  R  +    +A SGVE+R  R +YVHA
Sbjct:  114 PFGGNGSNPDTFDRLDAAGASVKWSNPAFRFSHVKMFVIDDAVAIIMNLNLSRSAFDDNREFAAVTTRGDAVAEAAAIFAADWTRAAEPSP-GPLIVSPVDSRSTLIGLIDAAAVSLDIYAEVMRDEAVLVAIERAEDRGVAVRLLMSPEYGDDDRGSAERERLATSGVEIRYARGVYVHA 293          
BLAST of mRNA_P-wetherbeei_contig52762.1.1 vs. uniprot
Match: A0A2H9N3L4_9BACT (Uncharacterized protein n=4 Tax=Caldiserica TaxID=67814 RepID=A0A2H9N3L4_9BACT)

HSP 1 Score: 133 bits (335), Expect = 1.210e-34
Identity = 67/180 (37.22%), Postives = 104/180 (57.78%), Query Frame = 1
Query:    1 PYGGSTDTAALAKRLDAAGIEHRWSDSRFRFTHAKYIVVDRQVAIIMNMNLTVSAFKGNREFGAISTEPALVNEAQAIFDGDWNGDPVEHPDGPLILSPTNSRQRFLDLIGGADRSIDLYVEVINDPDLINELGYAAQAGIRVRLIVNAPESDSV-RSVYAAMARSGVEVRVLRRLYVHA 537
            PY G      +  +L   GI+ +WS+  +++TH+K++V+D+    IM +NL+ SAF  NREFG I  +P  VNE   IF  DWN  P    + PL++SP NSR + +DL+  A   ID+Y E I D   +N L   A +G++V +IV  P S  V ++    + +S VE++ +   ++HA
Sbjct:  107 PYQGYGANKDVKDKLSHYGIDTKWSNRVYQYTHSKFLVIDKTTGYIMTLNLSKSAFTKNREFGVIVNDPDTVNELLNIFSADWNRKPYVAVNSPLVVSPENSRTKIIDLLNSAQSEIDVYAEEIEDQQFMNTLEKIAVSGVKVYVIVADPSSIDVNKAAIDELKKSMVEIKSVTSPFIHA 286          
BLAST of mRNA_P-wetherbeei_contig52762.1.1 vs. uniprot
Match: A0A7V9I7V6_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9I7V6_9CHLR)

HSP 1 Score: 130 bits (326), Expect = 3.320e-33
Identity = 66/180 (36.67%), Postives = 108/180 (60.00%), Query Frame = 1
Query:    1 PYGGSTDTAALAKRLDAAGIEHRWSDSRFRFTHAKYIVVDRQVAIIMNMNLTVSAFKGNREFGAISTEPALVNEAQAIFDGDWNGDPVEHPDGPLILSPTNSRQRFLDLIGGADRSIDLYVEVINDPDLINELGYAAQAGIRVRLIVNAPE-SDSVRSVYAAMARSGVEVRVLRRLYVHA 537
            P+GG   +    + L++AG+E  +  S FR+TH K +++D + A++M  NLT SAF  NRE+ A+ T P  V E QAIF+ DW+    E     L++S  NSRQ+ L+LI  A RS+++  EV+ D ++   L    + G+RVR++++ PE  ++       ++ +GV VR++   Y+HA
Sbjct:  115 PFGGGAGSGDSLRALESAGVETEYGVSTFRYTHEKAVIIDGKRALVMTANLTKSAFTRNREYLALVTSPLEVAEIQAIFNADWDRRTYEPHVSSLVVSDVNSRQKLLELITSAQRSLEIEAEVMADKEIRRVLSETQKRGVRVRVVMSPPEPEETTYGGLVELSAAGVGVRLVSSPYIHA 294          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52762.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V9VWS1_9CHLR2.800e-5851.40Uncharacterized protein n=1 Tax=Chloroflexia bacte... [more]
A0A7V8WQZ8_9CHLR5.520e-4949.17Uncharacterized protein n=1 Tax=Chloroflexia bacte... [more]
A0A7V9SCY7_9CHLR5.690e-4444.69Uncharacterized protein n=1 Tax=Chloroflexia bacte... [more]
A0A7V9VGK1_9CHLR6.240e-4443.82Phosphatidylserine/phosphatidylglycerophosphate/ c... [more]
A0A7W1I3S3_9CHLR2.270e-4347.80Uncharacterized protein n=1 Tax=Chloroflexia bacte... [more]
A0A7V9HKT4_9CHLR3.220e-4144.69Uncharacterized protein n=1 Tax=Chloroflexia bacte... [more]
A0A7V9VEB0_9CHLR8.700e-4045.36Uncharacterized protein n=1 Tax=Chloroflexia bacte... [more]
A0A6J4UPW5_9CHLR1.250e-3743.65Cardiolipin synthetase n=1 Tax=uncultured Thermomi... [more]
A0A2H9N3L4_9BACT1.210e-3437.22Uncharacterized protein n=4 Tax=Caldiserica TaxID=... [more]
A0A7V9I7V6_9CHLR3.320e-3336.67Uncharacterized protein n=1 Tax=Chloroflexia bacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52762contigP-wetherbeei_contig52762:2..538 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog511051.CSE_09400
PFAMsPLDc_2
Model size537
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.25e-28
EggNOG OGsCOG1502@1|root,COG1502@2|Bacteria
DescriptionCatalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Cds size537
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186790.8300931-CDS-P-wetherbeei_contig52762:1..5381683186790.8300931-CDS-P-wetherbeei_contig52762:1..538Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig52762 2..538 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52762.1.1prot_P-wetherbeei_contig52762.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig52762 2..538 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig52762.1.1

>prot_P-wetherbeei_contig52762.1.1 ID=prot_P-wetherbeei_contig52762.1.1|Name=mRNA_P-wetherbeei_contig52762.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=179bp
PYGGSTDTAALAKRLDAAGIEHRWSDSRFRFTHAKYIVVDRQVAIIMNMN
LTVSAFKGNREFGAISTEPALVNEAQAIFDGDWNGDPVEHPDGPLILSPT
NSRQRFLDLIGGADRSIDLYVEVINDPDLINELGYAAQAGIRVRLIVNAP
ESDSVRSVYAAMARSGVEVRVLRRLYVHA
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mRNA from alignment at P-wetherbeei_contig52762:2..538+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig52762.1.1 ID=mRNA_P-wetherbeei_contig52762.1.1|Name=mRNA_P-wetherbeei_contig52762.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=537bp|location=Sequence derived from alignment at P-wetherbeei_contig52762:2..538+ (Phaeothamnion wetherbeei SAG_119_79)
CCCTACGGTGGCTCCACGGATACGGCGGCGCTGGCGAAGCGGCTCGACGC GGCCGGGATCGAGCACCGATGGAGCGACTCCCGCTTCCGGTTCACCCATG CCAAGTACATCGTGGTCGACCGCCAGGTGGCGATCATTATGAACATGAAC CTCACGGTCTCGGCGTTCAAGGGCAACCGCGAGTTCGGCGCGATCTCGAC GGAGCCGGCGCTCGTCAACGAGGCGCAGGCGATCTTCGACGGCGACTGGA ACGGCGATCCGGTGGAGCACCCGGACGGGCCGCTCATCCTCAGCCCGACC AACAGTCGGCAACGCTTCCTCGACCTGATCGGCGGTGCTGACCGGTCGAT CGACCTCTACGTGGAGGTCATCAACGATCCCGACCTCATCAACGAGCTGG GATACGCCGCCCAGGCGGGCATTCGCGTGCGGCTGATCGTCAACGCCCCG GAGAGCGACAGCGTGCGCTCCGTCTACGCCGCGATGGCGCGGTCGGGGGT GGAGGTTCGCGTATTGAGACGGCTCTACGTCCATGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig52762:2..538+

>mRNA_P-wetherbeei_contig52762.1.1 ID=mRNA_P-wetherbeei_contig52762.1.1|Name=mRNA_P-wetherbeei_contig52762.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=537bp|location=Sequence derived from alignment at P-wetherbeei_contig52762:2..538+ (Phaeothamnion wetherbeei SAG_119_79)
CCCTACGGTGGCTCCACGGATACGGCGGCGCTGGCGAAGCGGCTCGACGC
GGCCGGGATCGAGCACCGATGGAGCGACTCCCGCTTCCGGTTCACCCATG
CCAAGTACATCGTGGTCGACCGCCAGGTGGCGATCATTATGAACATGAAC
CTCACGGTCTCGGCGTTCAAGGGCAACCGCGAGTTCGGCGCGATCTCGAC
GGAGCCGGCGCTCGTCAACGAGGCGCAGGCGATCTTCGACGGCGACTGGA
ACGGCGATCCGGTGGAGCACCCGGACGGGCCGCTCATCCTCAGCCCGACC
AACAGTCGGCAACGCTTCCTCGACCTGATCGGCGGTGCTGACCGGTCGAT
CGACCTCTACGTGGAGGTCATCAACGATCCCGACCTCATCAACGAGCTGG
GATACGCCGCCCAGGCGGGCATTCGCGTGCGGCTGATCGTCAACGCCCCG
GAGAGCGACAGCGTGCGCTCCGTCTACGCCGCGATGGCGCGGTCGGGGGT
GGAGGTTCGCGTATTGAGACGGCTCTACGTCCATGCG
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