mRNA_P-wetherbeei_contig52752.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52752.1.1 vs. uniprot
Match: A0A6L8QAV8_9BACT (Chemotaxis protein (Fragment) n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A6L8QAV8_9BACT) HSP 1 Score: 140 bits (352), Expect = 4.060e-38 Identity = 91/144 (63.19%), Postives = 110/144 (76.39%), Query Frame = 1
Query: 109 SHQMQGYSEESSRQADSASHAGEQVNGNIQMVATATQEMXXXXXXXXXXXXXXXXXSASAVIMANATNQTISKLGESSTQIGKVIKVISSIAQQTNLLALNATIEAARAGEAGRGFAVVANEVKELAKETAKATEDITQKIETI 540
S QM G +EE+S QA+ S A EQVN NIQ VAT XXXXX ++ AV +A+ TN+T++KLG+SS +IG+VIKVI+SIA+QTNLLALNATIEAARAGEAG+GFAVVANEVKELA +TAKATEDI+ KI+ I
Sbjct: 2 SQQMAGNAEETSAQANVVSAASEQVNQNIQTVATXXXXXXXXXXEIAHNATQATKVTSDAVQLADTTNKTVTKLGDSSAEIGQVIKVITSIAEQTNLLALNATIEAARAGEAGKGFAVVANEVKELANQTAKATEDISNKIQAI 145
BLAST of mRNA_P-wetherbeei_contig52752.1.1 vs. uniprot
Match: A0A3D2VV51_9GAMM (Methyl-accepting transducer domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3D2VV51_9GAMM) HSP 1 Score: 133 bits (334), Expect = 7.630e-35 Identity = 98/180 (54.44%), Postives = 118/180 (65.56%), Query Frame = 1
Query: 1 VARGLTSMVGDLRRSLAEVQENVVTLSGAAEELAANSHQMQGYSEESSRQADSASHAGEQVNGNIQMVATATQEMXXXXXXXXXXXXXXXXXSASAVIMANATNQTISKLGESSTQIGKVIKVISSIAQQTNLLALNATIEAARAGEAGRGFAVVANEVKELAKETAKATEDITQKIETI 540
+A+GL ++ LR S+A + + TL+GAAEEL S QM G +E +S +A XXXXXXXX ASAV MA + N T+ KLGESS IG +IKVI+SIA+QT+LLALNATIEAARAGEAG+GFAVVANEVKELAKETAKATE+I +KIE I
Sbjct: 1 MAQGLDQLLATLRDSMARIGQTAQTLAGAAEELTMVSQQMGGNAEAASHKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNAAEGAKVVASAVTMAQSANTTVRKLGESSAGIGNIIKVITSIAEQTHLLALNATIEAARAGEAGKGFAVVANEVKELAKETAKATEEIGRKIEAI 180
BLAST of mRNA_P-wetherbeei_contig52752.1.1 vs. uniprot
Match: UPI00201C1197 (methyl-accepting chemotaxis protein n=1 Tax=Jatrophihabitans telluris TaxID=2038343 RepID=UPI00201C1197) HSP 1 Score: 137 bits (345), Expect = 1.050e-34 Identity = 81/180 (45.00%), Postives = 125/180 (69.44%), Query Frame = 1
Query: 1 VARGLTSMVGDLRRSLAEVQENVVTLSGAAEELAANSHQMQGYSEESSRQADSASHAGEQVNGNIQMVATATQEMXXXXXXXXXXXXXXXXXSASAVIMANATNQTISKLGESSTQIGKVIKVISSIAQQTNLLALNATIEAARAGEAGRGFAVVANEVKELAKETAKATEDITQKIETI 540
+A L G LR +L+ + + V L+ +AE+L Q+ ++E++R++ +A+ ++V+ ++Q VA AT++M +A+AV A A +T+++LGESS+QIG V++VI++IA+QTNLLALNATIEAARAG AG+GFAVVA+EVK+LA+ETAKATE+I+ ++E I
Sbjct: 275 MAGALDKAQGSLRHTLSSIGSSAVGLASSAEQLTVIGAQVSATADETARESANAAAVADEVSTHVQTVAAATEQMTASINEIEQSSANAVQVAATAVTEARAATETVTRLGESSSQIGSVVRVITAIAEQTNLLALNATIEAARAGAAGKGFAVVASEVKDLAQETAKATEEISSRVEKI 454
BLAST of mRNA_P-wetherbeei_contig52752.1.1 vs. uniprot
Match: H6RUA2_BLASD (Methyl-accepting chemotaxis receptor/sensory transducer protein n=3 Tax=Geodermatophilaceae TaxID=85030 RepID=H6RUA2_BLASD) HSP 1 Score: 129 bits (324), Expect = 4.100e-34 Identity = 73/124 (58.87%), Postives = 91/124 (73.39%), Query Frame = 1
Query: 169 AGEQVNGNIQMVATATQEMXXXXXXXXXXXXXXXXXSASAVIMANATNQTISKLGESSTQIGKVIKVISSIAQQTNLLALNATIEAARAGEAGRGFAVVANEVKELAKETAKATEDITQKIETI 540
A E+V+ N+Q VA +EM ++ AV A AT T++KLGESS +IG ++KVI+SIA+QTNLLALNATIEAARAGEAG+GFAVVANEVKELA+ETAKATEDI Q+++ I
Sbjct: 5 AAEEVSRNVQTVAAGAEEMGASIREIATNAAEASEVASRAVTAAQATTATVTKLGESSAEIGNIVKVITSIAEQTNLLALNATIEAARAGEAGKGFAVVANEVKELAQETAKATEDIAQRVQAI 128
BLAST of mRNA_P-wetherbeei_contig52752.1.1 vs. uniprot
Match: A0A4Q6AUP4_9PROT (PAS domain S-box protein (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6AUP4_9PROT) HSP 1 Score: 134 bits (338), Expect = 6.340e-34 Identity = 86/160 (53.75%), Postives = 111/160 (69.38%), Query Frame = 1
Query: 52 EVQENVVTLSGAAEELAANSHQMQGYSEESSRQADSASHAGEQVNGNIQMVATATQEMXXXXXXXXXXXXXXXXXSASAVIMANATNQTISKLGESSTQIGKVIKVISSIAQQTNLLALNATIEAARAGEAGRGFAVVANEVKELAKETAKATEDITQKI 531
E+ E L+ A+EEL A+ QM S +++ QA SA+ + + V+ + +V+T T+++ ++ A+ATN TI KLGESS +IG VIKVISSIAQQTNLLALNATIEAARAG+AGRGFAVVANEVKELAK+TA+ATE+IT KI
Sbjct: 244 ELAEAATQLAAASEELNASXTQMVQNSAQTNAQATSAAKSADDVSKGVLLVSTNTEQLQVAIKEISKNASEASTMTSMTKQEAHATNLTIQKLGESSKEIGNVIKVISSIAQQTNLLALNATIEAARAGDAGRGFAVVANEVKELAKQTARATEEITSKI 403
BLAST of mRNA_P-wetherbeei_contig52752.1.1 vs. uniprot
Match: A0A8J3X018_9ACTN (Uncharacterized protein n=2 Tax=Planosporangium mesophilum TaxID=689768 RepID=A0A8J3X018_9ACTN) HSP 1 Score: 134 bits (337), Expect = 1.320e-33 Identity = 86/169 (50.89%), Postives = 115/169 (68.05%), Query Frame = 1
Query: 55 VQENVVTLSGAAEELAANSHQMQGYS-------EESSRQADSASHAGEQVNGNIQMVATATQEMXXXXXXXXXXXXXXXXXSASAVIMANATNQTISKLGESSTQIGKVIKVISSIAQQTNLLALNATIEAARAGEAGRGFAVVANEVKELAKETAKATEDITQKIETI 540
++ V TL+ A L A S ++ G + +E++ QAD + A V+ N+Q VA +EM ++ AV +A +TNQT+SKLGESS +IG VIKVI+SIA+QTNLLALNATIEAARAGEAG+GFAVVA+EVK+LA+ETAKATEDI++++E I
Sbjct: 279 IRSIVETLTTGARTLGATSEKLAGVTARIGVSAKEAASQADVVAGAAGGVSSNVQTVAAGXEEMDASIREIAENAHSAARVASEAVGVAESTNQTVSKLGESSAEIGNVIKVITSIAEQTNLLALNATIEAARAGEAGKGFAVVASEVKDLAQETAKATEDISRRVEAI 447
BLAST of mRNA_P-wetherbeei_contig52752.1.1 vs. uniprot
Match: A0A8J7ACH2_9CYAN (Methyl-accepting chemotaxis protein n=2 Tax=aff. Roholtiella sp. LEGE 12411 TaxID=1828822 RepID=A0A8J7ACH2_9CYAN) HSP 1 Score: 130 bits (328), Expect = 1.330e-33 Identity = 104/180 (57.78%), Postives = 129/180 (71.67%), Query Frame = 1
Query: 1 VARGLTSMVGDLRRSLAEVQENVVTLSGAAEELAANSHQMQGYSEESSRQADSASHAGEQVNGNIQMVATATQEMXXXXXXXXXXXXXXXXXSASAVIMANATNQTISKLGESSTQIGKVIKVISSIAQQTNLLALNATIEAARAGEAGRGFAVVANEVKELAKETAKATEDITQKIETI 540
VA M+ +R S+ ++ E T++ +AEEL A S +M G + +++ QA SAS + V+ N XXXXXXXXXXXXXXXXX V A TN TI+KLG+SS IGKV+KVI+SIAQQTNLLALNATIEAARAG+AG+GFAVVA+EVKELAK+TA ATEDI+Q+IE I
Sbjct: 59 VAIAFNEMIASVRDSIRQMAEVAATVASSAEELTAVSSEMSGNASQTAEQATSASASAXXVSQNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGTAVKTNATINKLGQSSIDIGKVVKVITSIAQQTNLLALNATIEAARAGDAGKGFAVVASEVKELAKQTANATEDISQRIEAI 238
BLAST of mRNA_P-wetherbeei_contig52752.1.1 vs. uniprot
Match: A0A5B1LBB5_9ACTN (GAF domain-containing protein n=1 Tax=Nocardioides humilatus TaxID=2607660 RepID=A0A5B1LBB5_9ACTN) HSP 1 Score: 135 bits (340), Expect = 1.480e-33 Identity = 104/180 (57.78%), Postives = 128/180 (71.11%), Query Frame = 1
Query: 1 VARGLTSMVGDLRRSLAEVQENVVTLSGAAEELAANSHQMQGYSEESSRQADSASHAGEQVNGNIQMVATATQEMXXXXXXXXXXXXXXXXXSASAVIMANATNQTISKLGESSTQIGKVIKVISSIAQQTNLLALNATIEAARAGEAGRGFAVVANEVKELAKETAKATEDITQKIETI 540
VA GL S++ +R S+ ++ L+ +A +L + S M + +S +A SAS A QV+ +IQ VA XXXXXXXXXXXXX + AV +A T++ LGESS +IG+VIKVI+SIAQQTNLLALNATIEAARAG+AG+GFAVVANEVKELAKETAKATEDI QKIE I
Sbjct: 534 VATGLRSLLNTMRSSMGDISRTAEALATSAGQLTSLSQGMGEGATLTSDRAGSASTASVQVSASIQTVAXXXXXXXXXXXXXXXXXXXAAAVATDAVNVAGGAEATVASLGESSAEIGQVIKVITSIAQQTNLLALNATIEAARAGDAGKGFAVVANEVKELAKETAKATEDIGQKIEAI 713
BLAST of mRNA_P-wetherbeei_contig52752.1.1 vs. uniprot
Match: UPI000E21EC42 (methyl-accepting chemotaxis protein n=1 Tax=Austwickia chelonae TaxID=100225 RepID=UPI000E21EC42) HSP 1 Score: 134 bits (336), Expect = 1.930e-33 Identity = 98/180 (54.44%), Postives = 129/180 (71.67%), Query Frame = 1
Query: 1 VARGLTSMVGDLRRSLAEVQENVVTLSGAAEELAANSHQMQGYSEESSRQADSASHAGEQVNGNIQMVATATQEMXXXXXXXXXXXXXXXXXSASAVIMANATNQTISKLGESSTQIGKVIKVISSIAQQTNLLALNATIEAARAGEAGRGFAVVANEVKELAKETAKATEDITQKIETI 540
+AR L +R L V E T++ A+EEL A + QM+ + SS +A +A+ + V+ N+Q XXXXXXXXXXXX +ASAV +A+ TN T++KLG+SS +IG V+KVI++IA+QTNLLALNATIEAARAGEAG+GFAVVANEVK+LA+ETAKATEDI+ ++E I
Sbjct: 274 MARALDQSRESMRNVLRRVGEASSTVAAASEELTATAGQMRASATLSSERAGAAAGSAADVSNNVQXXXXXXXXXXXXXXXXXXXXXDAAGVAASAVQVADRTNSTVAKLGDSSVEIGNVVKVITTIAEQTNLLALNATIEAARAGEAGKGFAVVANEVKDLAQETAKATEDISHRVEQI 453
BLAST of mRNA_P-wetherbeei_contig52752.1.1 vs. uniprot
Match: UPI001944F605 (methyl-accepting chemotaxis protein n=1 Tax=Dactylosporangium siamense TaxID=685454 RepID=UPI001944F605) HSP 1 Score: 133 bits (335), Expect = 2.010e-33 Identity = 84/180 (46.67%), Postives = 117/180 (65.00%), Query Frame = 1
Query: 1 VARGLTSMVGDLRRSLAEVQENVVTLSGAAEELAANSHQMQGYSEESSRQADSASHAGEQVNGNIQMVATATQEMXXXXXXXXXXXXXXXXXSASAVIMANATNQTISKLGESSTQIGKVIKVISSIAQQTNLLALNATIEAARAGEAGRGFAVVANEVKELAKETAKATEDITQKIETI 540
+A L + + + S+AEV + L+GA+ LA + + + SS Q AS+A E V+ ++ ++A +EM ++ AV A A N T+ +L ESST+IG V+K+I++IA+QTNLLALNATIEAARAGEAG+GFAVVANEVK+LA+ETAKATEDI Q++ TI
Sbjct: 243 MAIALDNAIDSIHGSIAEVNNSSDALAGASRNLAQVNEGISNAAVTSSAQMTEASNASEAVSRHVNVIAAGAEEMGVSIQEIARNAADAAGVASGAVREAAAANSTVDRLAESSTEIGSVLKLITAIAEQTNLLALNATIEAARAGEAGKGFAVVANEVKDLAQETAKATEDIRQRVTTI 422 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52752.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52752.1.1 >prot_P-wetherbeei_contig52752.1.1 ID=prot_P-wetherbeei_contig52752.1.1|Name=mRNA_P-wetherbeei_contig52752.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp MVGDLRRSLAEVQENVVTLSGAAEELAANSHQMQGYSEESSRQADSASHAback to top mRNA from alignment at P-wetherbeei_contig52752:3..542+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52752.1.1 ID=mRNA_P-wetherbeei_contig52752.1.1|Name=mRNA_P-wetherbeei_contig52752.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig52752:3..542+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52752:3..542+ >mRNA_P-wetherbeei_contig52752.1.1 ID=mRNA_P-wetherbeei_contig52752.1.1|Name=mRNA_P-wetherbeei_contig52752.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig52752:3..542+ (Phaeothamnion wetherbeei SAG_119_79)back to top |