mRNA_P-wetherbeei_contig52750.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52750.1.1 vs. uniprot
Match: A0A7X9KKJ1_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9KKJ1_9ACTN) HSP 1 Score: 196 bits (497), Expect = 2.470e-57 Identity = 105/177 (59.32%), Postives = 121/177 (68.36%), Query Frame = 1
Query: 1 LWAAVFITAAMVHTLALWRAPARRHAVLAVVFVFAAVLTRATVGIGAAVGLGLVGLLFWRRDRHRSITLSVAAFAALGTHMVINLAKFGTLLDLPADRQVLTLQSPSRAAWFAGNDGSFFGTRFLTTTVLQYLRPDAVRVERLLPVVRFGPAARELGSYRLESNTPASSLTASATLL 531
LWA L +W AP R ++AV V A VLTR++VGIGA +G G L WRR R ++ A L ++ +NLAKFGTLLDLPADRQ+L+LQ+P+RAAWFAGNDGSFF RFL TTV+ YLRPD VR ERLLP VRFGP A E GSY LE NTPASSL SATLL
Sbjct: 173 LWAFALFLLTATAALRMWAAPGRHTFLVAVALVTATVLTRSSVGIGALAAVGFTGALLWRRHRRVAVAAGAGAVGGLLLNVAVNLAKFGTLLDLPADRQLLSLQNPARAAWFAGNDGSFFSLRFLPTTVVHYLRPDTVRFERLLPFVRFGPLATEHGSYPLEGNTPASSLPTSATLL 349
BLAST of mRNA_P-wetherbeei_contig52750.1.1 vs. uniprot
Match: A0A539DZD1_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539DZD1_9ACTN) HSP 1 Score: 179 bits (453), Expect = 1.210e-49 Identity = 93/172 (54.07%), Postives = 119/172 (69.19%), Query Frame = 1
Query: 1 LWAAVFITAAMVHTLALWRAPARRHAVLAVVFVFAAVLTRATVGIGAAVGLGLVGLLFWRRDRHRSITLSV---AAFAALGTHMVINLAKFGTLLDLPADRQVLTLQSPSRAAWFAGNDGSFFGTRFLTTTVLQYLRPDAVRVERLLPVVRFGPAARELGSYRLESNTPASS 507
LWAA F T A+V + + P+RR AVLA + AA+LTRA VGIG A G G+V L WRR+R + ++ A A TH+ +N AKFG+ LDLPA+RQ+L++ P RAAWFAGN GSFF RFL TTV+ YLRPD VR ERL+P +R+GP A + GSY +E+ TPA+S
Sbjct: 188 LWAAAFATWALVGIIGMHADPSRRSAVLAAACIAAAILTRAPVGIGIATGAGIVALTMWRRERTNATNATIVIGACIAGFATHVAVNFAKFGSALDLPAERQLLSINVPERAAWFAGNHGSFFSLRFLPTTVVHYLRPDTVRFERLVPFIRYGPLATDRGSYPMEAITPAAS 359
BLAST of mRNA_P-wetherbeei_contig52750.1.1 vs. uniprot
Match: A0A6N2DLR5_9ACTN (Uncharacterized protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DLR5_9ACTN) HSP 1 Score: 163 bits (412), Expect = 6.290e-44 Identity = 85/143 (59.44%), Postives = 104/143 (72.73%), Query Frame = 1
Query: 103 AAVLTRATVGIGAAVGLGLVGLLFWRRDRHRSITLSVAAFAALGTHMVINLAKFGTLLDLPADRQVLTLQSPSRAAWFAGNDGSFFGTRFLTTTVLQYLRPDAVRVERLLPVVRFGPAARELGSYRLESNTPASSLTASATLL 531
A VLTRA+VGIG ++ L V WRRDR + + AA + HM +NLAKFG+LL LPA+RQVL+L P RA WFAGN GSFF RFL TT+ QYLRPD +R ERL+P +RFGP A +LGSY +ES TPASS+TA+A +L
Sbjct: 208 ATVLTRASVGIGVSLALMAVAAFVWRRDRRVAGWAAGAATGGVALHMALNLAKFGSLLGLPAERQVLSLIDPERAEWFAGNSGSFFSARFLPTTLAQYLRPDTLRFERLVPGIRFGPLAPDLGSYPVESTTPASSITATAPVL 350
BLAST of mRNA_P-wetherbeei_contig52750.1.1 vs. uniprot
Match: A0A524NC77_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A524NC77_9ACTN) HSP 1 Score: 143 bits (361), Expect = 1.020e-36 Identity = 82/149 (55.03%), Postives = 99/149 (66.44%), Query Frame = 1
Query: 103 AAVLTRATVGIGAAVGLGLV---GLLFWRRDR---HRSITLSVAAFAALGTHMVINLAKFGTLLDLPADRQVLTLQSPSRAAWFAGNDGSFFGTRFLTTTVLQYLRPDAVRVERLLPVVRFGPAARELGSYRLESNTPASSLTASATLL 531
AA LTRA +G+G V L LV G+L WR R R + + H+ +N AKFGTL +P DRQ+L+L P RAAWFAGN+GSFF RFL TT++QYLRPD +R ERL+P +RFGP A + GSY ES TPASSL SATLL
Sbjct: 223 AATLTRAPIGLG--VSLALVASGGVLLWRSRRTGFDRGRWALLGGVLPIVAHVAVNFAKFGTLFSVPGDRQLLSLTDPVRAAWFAGNNGSFFSYRFLPTTLVQYLRPDGIRFERLVPGIRFGPLAVDRGSYPAESITPASSLPTSATLL 369
BLAST of mRNA_P-wetherbeei_contig52750.1.1 vs. uniprot
Match: A0A6C7E9Z3_ILUCY (Uncharacterized protein n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7E9Z3_ILUCY) HSP 1 Score: 137 bits (346), Expect = 1.380e-34 Identity = 78/154 (50.65%), Postives = 100/154 (64.94%), Query Frame = 1
Query: 97 VFAAVLTRATVGIGAAVGLGLVGLLFWRRDRHRSIT--------LSVAA-FAALGTHMVINLAKFGTLLDLPADRQVLTLQSPSRAAWFAGNDGSFFGTRFLTTTVLQYLRPDAVRVERLLPVVRFGPAARELGSYRLESNTPASSLTASATLL 531
V A +TRA +G+G A+ LGL+GL+ R R R+ L +A A L + V+N+AKFGTLL +P DRQ+L+L P+RAA+F GSFF FL TT+ QYLRPD +R ERL+P +RFGP A GS +E+ TPASSL SATLL
Sbjct: 218 VLATTMTRAPIGLGLAMSLGLIGLILAWRSRSRASDSARRHDTWLPIAGGIAPLAAYAVVNVAKFGTLLSVPGDRQLLSLTDPTRAAFFETTGGSFFSPHFLPTTLAQYLRPDTIRFERLVPGIRFGPLAENYGSIDVETVTPASSLIVSATLL 371
BLAST of mRNA_P-wetherbeei_contig52750.1.1 vs. uniprot
Match: A0A7K1B7V5_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A7K1B7V5_9ACTN) HSP 1 Score: 133 bits (335), Expect = 4.280e-33 Identity = 97/206 (47.09%), Postives = 123/206 (59.71%), Query Frame = 1
Query: 1 LWAAVFIT---AAMVHTLALWRA---PARRHAVLAVVFVFAA-VLTRATVGIGAAVGLGLVGLL--FWRR------------DRHRS------ITLSVAAFAALG--THMVINLAKFGTLLDLPADRQVLTLQSPSRAAWFAGNDGSFFGTRFLTTTVLQYLRPDAVRVERLLPVVRFGPAARELGSYRLESNTPASSLTASATLL 531
LWAA F A +V L + A P RR +LAV F AA + TRA+VG+G AVG LV + FW R DR R+ ++ A +A+G H IN AKFG+ LP Q+L++ P+RAAWFAGN SFF RFL TT++QY+RPD VR+ERL P VR+GP A + GSY LE+ TP++SLT SATLL
Sbjct: 144 LWAAAFAVWTLAGVVRLLDVLDAGDSPTRRQ-LLAVGFPIAAGITTRASVGLGVAVGACLVLAVPVFWSRIVARSGKMRDQNDRGRTGAPAMITAVATVAASAVGFVVHTGINWAKFGSPTALPGQLQLLSINDPTRAAWFAGNGDSFFSPRFLETTLVQYVRPDTVRLERLFPFVRYGPLATDRGSYPLETITPSASLTTSATLL 348
BLAST of mRNA_P-wetherbeei_contig52750.1.1 vs. uniprot
Match: A0A0G3V4V5_9ACTN (Uncharacterized protein n=1 Tax=Actinobacteria bacterium IMCC26256 TaxID=1650658 RepID=A0A0G3V4V5_9ACTN) HSP 1 Score: 97.8 bits (242), Expect = 1.900e-20 Identity = 66/187 (35.29%), Postives = 94/187 (50.27%), Query Frame = 1
Query: 1 LWAAVFITAAMVHTLALWRAPARRHAVLAVVFVFAAVLTRATVGIGAAVGLGLV--GLLFWRRDR------------HRSITLSVAAFAALGTHMVINLAKFGTLLDLPADRQVLTLQSPSRAAWFAGNDGSFFGTRFLTTTVLQYLRPDAVRVERLLPVVRFGPAARELGSYRLESNTPASSLTAS 519
+W F AA LA + +LA +F AA+L+R V +G LGL+ G LF R+ R +L +AA+ + IN KFG+ DLP RQ ++L +P+R A A N GS F +L T V QY+RPDA+R+ RL P + F P A G + ++ P SS+ +S
Sbjct: 164 MWGVAFTMAAFASILAFIIDRRTKSLLLASLFATAAILSRGPVALGVVAALGLLAAGALF-RKSRVWFGLDADASPLRLVASLGLAAWVPIAAFATINYIKFGSFFDLPNSRQSISLVNPNRKAVLASNHGSLFSPGYLITNVAQYVRPDALRLNRLFPFITFPPLANNFGGHLYDTIEPTSSIPSS 349
BLAST of mRNA_P-wetherbeei_contig52750.1.1 vs. uniprot
Match: A0A538JIG5_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538JIG5_9ACTN) HSP 1 Score: 92.8 bits (229), Expect = 1.050e-18 Identity = 68/182 (37.36%), Postives = 89/182 (48.90%), Query Frame = 1
Query: 1 LWAAVFITAAMVHTLALWRAPARRHAVLAVVFVFAAVLTRATVGIGAAVGLGLVGLL-----FWRRDRHRS---ITLSVAAFAALGTHMVINLAKFGTLLDLPADRQVLTLQSPSRAAWFAGNDGSFFGTRFLTTTVLQYLRPDAVRVERLLPVVRF-GPAARELGSYRLESNTPASSLTAS 519
+W AA +A AP RR VL + V A LTR ++G+G V L LV ++ RDR L AA + + +N AKFGTLL +P D+Q P R N G F F+ TT+LQY RPDA+ V RLLP + F AR +G R ++ ASS+ AS
Sbjct: 174 MWGIALALAAYDQLIAYVLAPTRRRLVLVTLLVAGAFLTRGSIGLGPVVALMLVAVMSAGGALRARDRAGLPGVAALGAAALVPIILYSYVNYAKFGTLLSIPTDKQFQVTVDPHRREVLRANGGKLFRLAFVPTTLLQYARPDALDVHRLLPWISFPSHRARVIGDARFDTLDRASSVPAS 355
BLAST of mRNA_P-wetherbeei_contig52750.1.1 vs. uniprot
Match: A0A538HEV9_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538HEV9_9ACTN) HSP 1 Score: 82.0 bits (201), Expect = 3.010e-15 Identity = 55/171 (32.16%), Postives = 84/171 (49.12%), Query Frame = 1
Query: 106 AVLTRATVGIGAAVGLGLV--------GLLFWRRDR--------------------HRSITLSVAAFAA-LGTHMVINLAKFGTLLDLPADRQVLTLQSPSRAAWFAGNDGSFFGTRFLTTTVLQYLRPDAVRVERLLPVVRFGPAARELGSYRLESNTPASSLTASATLL 531
A+++RA+VG+G + LGL+ G +W R H SI V A A L ++M +N AKFGTL+ +P ++Q + L P R A A S FG R++ T+++QYLRPD + R P V F G + ++ P +S+T ++ LL
Sbjct: 183 AMMSRASVGLGPVIALGLLVAVRVIQRGADWWTAHRGQTSRRTTLARWCGLDADTAHGSIWQVVLATAIPLASYMYVNYAKFGTLVSVPIEKQDVLLARPERRAVLAATGNSLFGLRYVATSLVQYLRPDGIGFRRTFPWVTFAHFPHVFGGVQFDNIEPTASMTVTSVLL 353
BLAST of mRNA_P-wetherbeei_contig52750.1.1 vs. uniprot
Match: A0A838PIK5_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A838PIK5_9ACTN) HSP 1 Score: 74.7 bits (182), Expect = 1.870e-12 Identity = 55/152 (36.18%), Postives = 77/152 (50.66%), Query Frame = 1
Query: 1 LWAAVFITAAMVHTLALWRAPARRHAVLAVVFVFAAVLTRATVGIGAAVGLGLVGLLFW-----RRD-RHRSITLSVAA-FAALGTHMVINLAKFGTLLDLPADRQVLTLQSPSRAAWFAGNDGSFFGTRFLTTTVLQYLRPDAVRVERLLP 435
LW A F A++ + + R + LA + V A+ TR G+G + L + RRD R R+ VA ALG+ V+N+AKFG +P D+QV + +R A NDGS FG R++ TT+LQ +RPDAV R P
Sbjct: 169 LWGAAFAVASLAAIVMVLRRASIGRIALAGLLVTLAINTRVPAGLGGVLALLALXXXXXXXXAARRDGRLRTAAALVAXXLVALGSSAVVNVAKFGEPYGIPLDKQVFSGIDANRKAALEDNDGSLFGARYVPTTILQVVRPDAVGTTRSFP 320 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52750.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52750.1.1 >prot_P-wetherbeei_contig52750.1.1 ID=prot_P-wetherbeei_contig52750.1.1|Name=mRNA_P-wetherbeei_contig52750.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=167bp MVHTLALWRAPARRHAVLAVVFVFAAVLTRATVGIGAAVGLGLVGLLFWRback to top mRNA from alignment at P-wetherbeei_contig52750:12..542- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52750.1.1 ID=mRNA_P-wetherbeei_contig52750.1.1|Name=mRNA_P-wetherbeei_contig52750.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig52750:12..542- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52750:12..542- >mRNA_P-wetherbeei_contig52750.1.1 ID=mRNA_P-wetherbeei_contig52750.1.1|Name=mRNA_P-wetherbeei_contig52750.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig52750:12..542- (Phaeothamnion wetherbeei SAG_119_79)back to top |