mRNA_P-wetherbeei_contig52719.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig52719.1.1
Unique NamemRNA_P-wetherbeei_contig52719.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig52719.1.1 vs. uniprot
Match: UPI0003471827 (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI0003471827)

HSP 1 Score: 180 bits (457), Expect = 3.820e-54
Identity = 91/158 (57.59%), Postives = 108/158 (68.35%), Query Frame = 1
Query:   10 LQRMVRAVLRAPVRVMWPCAVAGLEAVPARGSAVLAPNHLSFFDSVLMIMLLDRPVHFIGKADYLDSWKTRRLFPAMGMIPIDRDNGLKAMVALDAAADVLRDGGLLCVFPEGSRSRDGLLHRGYVGAARLALGTDSPLLPVGIIGTDRIQPPGARLP 483
            LQR  R V +  V  +W   V+G E +P  G A+L PNH+SF DS  +     R V FIGK++Y+DSWKT+ LFPAMGMIPIDR  G K   ALDAA +VL  G L  VFPEGSRSRDG LH+G  GAARLA+    P+ PVGI+GTD IQPPGA +P
Sbjct:   10 LQRHTRRVAKPAVTRLWNIDVSGYEKLPTVGPAILCPNHISFLDSAFLTFTAPRNVSFIGKSEYMDSWKTKFLFPAMGMIPIDRSGGDKCASALDAAREVLERGELFTVFPEGSRSRDGFLHKGRTGAARLAMSVGCPIYPVGILGTDAIQPPGATIP 167          
BLAST of mRNA_P-wetherbeei_contig52719.1.1 vs. uniprot
Match: A0A7W0R165_9ACTN (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0R165_9ACTN)

HSP 1 Score: 179 bits (455), Expect = 5.210e-54
Identity = 86/145 (59.31%), Postives = 107/145 (73.79%), Query Frame = 1
Query:   49 RVMWPCAVAGLEAVPARGSAVLAPNHLSFFDSVLMIMLLDRPVHFIGKADYLDSWKTRRLFPAMGMIPIDRDNGLKAMVALDAAADVLRDGGLLCVFPEGSRSRDGLLHRGYVGAARLALGTDSPLLPVGIIGTDRIQPPGARLP 483
            R +W    +G E +PA G A+L PNH+SF DS  +++ L R + F+GKA+Y+DSWKT+ LFPAMGMIPIDR  G K++ AL+ AA VLR G L  +FPEG+RSRDG+LHRG  GAARLAL    P+ PVGI GTD IQPPGA+ P
Sbjct:    7 RRLWRIDASGYEGLPADGPAILCPNHISFLDSAFLMLTLPRNISFVGKAEYMDSWKTKILFPAMGMIPIDRSGGSKSLAALETAAAVLRRGELFGIFPEGTRSRDGVLHRGRTGAARLALDIGCPIFPVGITGTDTIQPPGAKAP 151          
BLAST of mRNA_P-wetherbeei_contig52719.1.1 vs. uniprot
Match: A0A7C1YWS4_9ACTN (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YWS4_9ACTN)

HSP 1 Score: 179 bits (454), Expect = 5.820e-54
Identity = 85/158 (53.80%), Postives = 116/158 (73.42%), Query Frame = 1
Query:   10 LQRMVRAVLRAPVRVMWPCAVAGLEAVPARGSAVLAPNHLSFFDSVLMIMLLDRPVHFIGKADYLDSWKTRRLFPAMGMIPIDRDNGLKAMVALDAAADVLRDGGLLCVFPEGSRSRDGLLHRGYVGAARLALGTDSPLLPVGIIGTDRIQPPGARLP 483
            ++R+VR +LR   R ++P    GLE VP  G  ++A NH+SF+DS L++ +L RP+ F+GKA+Y+DSWKTR LFPA GMIPIDR  G  ++ AL+AAA+VL  G +  +FPEG+RSRDG LH+G  G ARL++GT +P++P+GI GTD IQ P  R P
Sbjct:    1 MRRIVRGLLRPTARYLFPVETHGLEKVPTSGGVIVAANHISFWDSALLMGVLPRPITFVGKAEYMDSWKTRYLFPAAGMIPIDRSGGKASLSALEAAAEVLNRGEIFGIFPEGTRSRDGYLHKGRTGVARLSIGTGAPIVPLGIRGTDSIQTPDDRFP 158          
BLAST of mRNA_P-wetherbeei_contig52719.1.1 vs. uniprot
Match: A0A7K0VHQ0_9ACTN (1-acyl-sn-glycerol-3-phosphate acyltransferase n=2 Tax=root TaxID=1 RepID=A0A7K0VHQ0_9ACTN)

HSP 1 Score: 178 bits (452), Expect = 2.520e-53
Identity = 88/158 (55.70%), Postives = 113/158 (71.52%), Query Frame = 1
Query:   10 LQRMVRAVLRAPVRVMWPCAVAGLEAVPARGSAVLAPNHLSFFDSVLMIMLLDRPVHFIGKADYLDSWKTRRLFPAMGMIPIDRDNGLKAMVALDAAADVLRDGGLLCVFPEGSRSRDGLLHRGYVGAARLALGTDSPLLPVGIIGTDRIQPPGARLP 483
            +Q   R V     + +W   + GLE +PA G+A+L PNH+SF DS  +++L  R + F+GKA+Y+DSWKT+ LFPAMGMIPIDR  G K+  ALD A  VLR G L  +FPEG+RSRDG L++G+ GAARLAL    P+LPVGIIGTD IQPP A++P
Sbjct:   13 VQYRARKVALPVAKRLWHFDLQGLEHLPAEGAAILCPNHISFLDSAFLMLLAGRDISFVGKAEYMDSWKTKFLFPAMGMIPIDRSGGEKSSSALDTAEAVLRRGELFGIFPEGTRSRDGALYKGHTGAARLALKVGCPILPVGIIGTDLIQPPDAKMP 170          
BLAST of mRNA_P-wetherbeei_contig52719.1.1 vs. uniprot
Match: A0A0R2Q202_9ACTN (PlsC domain-containing protein n=1 Tax=Acidimicrobium sp. BACL17 MAG-120823-bin42 TaxID=1655575 RepID=A0A0R2Q202_9ACTN)

HSP 1 Score: 178 bits (451), Expect = 2.660e-53
Identity = 88/158 (55.70%), Postives = 114/158 (72.15%), Query Frame = 1
Query:   10 LQRMVRAVLRAPVRVMWPCAVAGLEAVPARGSAVLAPNHLSFFDSVLMIMLLDRPVHFIGKADYLDSWKTRRLFPAMGMIPIDRDNGLKAMVALDAAADVLRDGGLLCVFPEGSRSRDGLLHRGYVGAARLALGTDSPLLPVGIIGTDRIQPPGARLP 483
            LQR VR  +RA    +W   + G + +P  G A+L  NH+SF DS  +I+   R + F+GK++YLDSWKTRRLFPA+GMIPIDR+ G K+ VALDAA +VLR G L  +FPEG+RSRDG+L++G  GAARLA+    P+ PVGI+GT  IQPP AR+P
Sbjct:   15 LQRRVRPAVRAVSNRLWNFDLRGFDQLPESGPAILCANHVSFLDSAFLIIHAPRNISFVGKSEYLDSWKTRRLFPALGMIPIDREGGEKSSVALDAAENVLRRGELFGIFPEGTRSRDGMLYKGKTGAARLAMKLRCPIFPVGIVGTREIQPPDARVP 172          
BLAST of mRNA_P-wetherbeei_contig52719.1.1 vs. uniprot
Match: A0A7W1CP33_9ACTN (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1CP33_9ACTN)

HSP 1 Score: 178 bits (451), Expect = 3.360e-53
Identity = 86/157 (54.78%), Postives = 109/157 (69.43%), Query Frame = 1
Query:   13 QRMVRAVLRAPVRVMWPCAVAGLEAVPARGSAVLAPNHLSFFDSVLMIMLLDRPVHFIGKADYLDSWKTRRLFPAMGMIPIDRDNGLKAMVALDAAADVLRDGGLLCVFPEGSRSRDGLLHRGYVGAARLALGTDSPLLPVGIIGTDRIQPPGARLP 483
            Q   R V    VR +W     G E +PA+G A+L PNH+SF DS+ ++  L R + F+GKA+Y+DSWKT+ LFPA+GMIPIDR  G K+  ALDAA  VLR G L  +FPEG+RSRDG L++G  GAARLA+    P+ PVG+ GTD IQPPGA+ P
Sbjct:   10 QERTRRVAGPVVRRLWRIERTGFERLPAQGPAILCPNHISFLDSMFLMFTLSRNISFVGKAEYMDSWKTKHLFPALGMIPIDRSGGAKSSTALDAAEAVLRRGELFGIFPEGTRSRDGALYKGRTGAARLAMAVGCPIYPVGVSGTDAIQPPGAKAP 166          
BLAST of mRNA_P-wetherbeei_contig52719.1.1 vs. uniprot
Match: A0A6I3DNY2_9ACTN (1-acyl-sn-glycerol-3-phosphate acyltransferase n=6 Tax=root TaxID=1 RepID=A0A6I3DNY2_9ACTN)

HSP 1 Score: 176 bits (447), Expect = 1.140e-52
Identity = 86/157 (54.78%), Postives = 113/157 (71.97%), Query Frame = 1
Query:   13 QRMVRAVLRAPVRVMWPCAVAGLEAVPARGSAVLAPNHLSFFDSVLMIMLLDRPVHFIGKADYLDSWKTRRLFPAMGMIPIDRDNGLKAMVALDAAADVLRDGGLLCVFPEGSRSRDGLLHRGYVGAARLALGTDSPLLPVGIIGTDRIQPPGARLP 483
            QR VR V+R  +  +W   + GLE +P  G A+L PNH+SFFDSV  ++   R + F+GKA+Y+DSWKT+ LFPA+GMIPIDR  G K+  AL AA +VLR G L  ++PEG+RSRDG+L++G+ GAARLA+    P++PVGIIGT  IQPP   LP
Sbjct:   24 QRRVRRVIRPVLNGLWKVTLEGLENIPTEGPAILCPNHISFFDSVFTMVYAGRQISFVGKAEYMDSWKTKHLFPALGMIPIDRAGGSKSEGALIAAENVLRRGELFGIYPEGTRSRDGILYKGHTGAARLAVKLGCPIIPVGIIGTREIQPPDKFLP 180          
BLAST of mRNA_P-wetherbeei_contig52719.1.1 vs. uniprot
Match: A0A431IPU5_9ACTN (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A431IPU5_9ACTN)

HSP 1 Score: 181 bits (458), Expect = 1.150e-52
Identity = 84/158 (53.16%), Postives = 114/158 (72.15%), Query Frame = 1
Query:   10 LQRMVRAVLRAPVRVMWPCAVAGLEAVPARGSAVLAPNHLSFFDSVLMIMLLDRPVHFIGKADYLDSWKTRRLFPAMGMIPIDRDNGLKAMVALDAAADVLRDGGLLCVFPEGSRSRDGLLHRGYVGAARLALGTDSPLLPVGIIGTDRIQPPGARLP 483
            +Q + RAVL  P R +W     G++ +P  G A++APNH+S  DS  + ++L R + ++GKA+Y+D WKT+ LFPAMGMIPIDR  G  A  ALDAAA  L  G L  ++PEG+R+RDGLLH+G+ G ARLAL T SP++PVGIIG+D++QPP A+ P
Sbjct:   84 MQSVFRAVLTPPFRFLWSVTTEGMDNIPVTGGAIIAPNHISVLDSFFVPLVLPRRITYVGKAEYMDDWKTKFLFPAMGMIPIDRSGGDSATAALDAAAGCLEAGELFGIYPEGTRARDGLLHKGHTGVARLALRTGSPIVPVGIIGSDQVQPPDAKFP 241          
BLAST of mRNA_P-wetherbeei_contig52719.1.1 vs. uniprot
Match: A0A6C7EAY1_ILUCY (Putative acyltransferase n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7EAY1_ILUCY)

HSP 1 Score: 176 bits (446), Expect = 1.230e-52
Identity = 88/157 (56.05%), Postives = 110/157 (70.06%), Query Frame = 1
Query:   13 QRMVRAVLRAPVRVMWPCAVAGLEAVPARGSAVLAPNHLSFFDSVLMIMLLDRPVHFIGKADYLDSWKTRRLFPAMGMIPIDRDNGLKAMVALDAAADVLRDGGLLCVFPEGSRSRDGLLHRGYVGAARLALGTDSPLLPVGIIGTDRIQPPGARLP 483
            QR +RA  R  VR +W   V G + +P  G A+L PNH+SF DS  +++   R + F+GKA+YLDSW TR LFPA+GMIP+DR  G +++ ALD+AA+VLR G L  VFPEG+RSR G L  G+ GAARLA  T  P+ PVGI GTD IQ PGARLP
Sbjct:   11 QRRLRAASRPVVRRLWDIEVIGYDRLPETGGAILCPNHISFLDSAFLMLTAPRNISFLGKAEYLDSWSTRFLFPALGMIPVDRSGGRQSVEALDSAAEVLRRGELFGVFPEGTRSRTGALGNGHTGAARLATRTGVPIYPVGITGTDEIQAPGARLP 167          
BLAST of mRNA_P-wetherbeei_contig52719.1.1 vs. uniprot
Match: UPI000E354E68 (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Desertimonas flava TaxID=2064846 RepID=UPI000E354E68)

HSP 1 Score: 176 bits (447), Expect = 1.560e-52
Identity = 86/162 (53.09%), Postives = 112/162 (69.14%), Query Frame = 1
Query:    1 GPGL-QRMVRAVLRAPVRVMWPCAVAGLEAVPARGSAVLAPNHLSFFDSVLMIMLLDRPVHFIGKADYLDSWKTRRLFPAMGMIPIDRDNGLKAMVALDAAADVLRDGGLLCVFPEGSRSRDGLLHRGYVGAARLALGTDSPLLPVGIIGTDRIQPPGARLP 483
            G GL Q+  R VL    R +W     G + +P  G A+L PNH+SF DS  +++ + R + F+GKA+Y+DSWKT+ +FPAMGMIPIDR  G ++  ALD AA VLR G L  +FPEG+RSRDG+LH+G  GAARLA+    P+ PVGI+GTD IQPP A+ P
Sbjct:    5 GAGLAQQRTRRVLGPVARRLWDIQTEGFDRLPGEGPAILCPNHISFLDSAFLMLSVPRNISFVGKAEYMDSWKTKYVFPAMGMIPIDRSGGSRSRAALDTAAQVLRRGELFGIFPEGTRSRDGVLHKGRTGAARLAVEEGVPIFPVGIVGTDAIQPPDAKAP 166          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52719.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00034718273.820e-5457.591-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A7W0R165_9ACTN5.210e-5459.311-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A7C1YWS4_9ACTN5.820e-5453.801-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A7K0VHQ0_9ACTN2.520e-5355.701-acyl-sn-glycerol-3-phosphate acyltransferase n=2... [more]
A0A0R2Q202_9ACTN2.660e-5355.70PlsC domain-containing protein n=1 Tax=Acidimicrob... [more]
A0A7W1CP33_9ACTN3.360e-5354.781-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A6I3DNY2_9ACTN1.140e-5254.781-acyl-sn-glycerol-3-phosphate acyltransferase n=6... [more]
A0A431IPU5_9ACTN1.150e-5253.161-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A6C7EAY1_ILUCY1.230e-5256.05Putative acyltransferase n=1 Tax=Ilumatobacter coc... [more]
UPI000E354E681.560e-5253.091-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52719contigP-wetherbeei_contig52719:62..544 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1313172.YM304_19710
Preferred nameplsC2
PFAMsAcyltransferase
Model size483
Max annot lvl201174|Actinobacteria
KEGG rclassRC00004,RC00037,RC00039
KEGG koko:K00655
KEGG ReactionR02241,R09381
KEGG Pathwayko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110
KEGG ModuleM00089
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.49e-51
EggNOG OGsCOG0204@1|root,COG0204@2|Bacteria,2GJ6V@201174|Actinobacteria
EC2.3.1.51
DescriptionAcyltransferase
Cds size465
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186790.0731866-UTR-P-wetherbeei_contig52719:61..791683186790.0731866-UTR-P-wetherbeei_contig52719:61..79Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig52719 62..79 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186790.0847714-CDS-P-wetherbeei_contig52719:79..5441683186790.0847714-CDS-P-wetherbeei_contig52719:79..544Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig52719 80..544 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52719.1.1prot_P-wetherbeei_contig52719.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig52719 80..544 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig52719.1.1

>prot_P-wetherbeei_contig52719.1.1 ID=prot_P-wetherbeei_contig52719.1.1|Name=mRNA_P-wetherbeei_contig52719.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=155bp
MVRAVLRAPVRVMWPCAVAGLEAVPARGSAVLAPNHLSFFDSVLMIMLLD
RPVHFIGKADYLDSWKTRRLFPAMGMIPIDRDNGLKAMVALDAAADVLRD
GGLLCVFPEGSRSRDGLLHRGYVGAARLALGTDSPLLPVGIIGTDRIQPP
GARLP
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mRNA from alignment at P-wetherbeei_contig52719:62..544+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig52719.1.1 ID=mRNA_P-wetherbeei_contig52719.1.1|Name=mRNA_P-wetherbeei_contig52719.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=483bp|location=Sequence derived from alignment at P-wetherbeei_contig52719:62..544+ (Phaeothamnion wetherbeei SAG_119_79)
GGGCCTGGCTTGCAACGAATGGTCCGAGCGGTGCTTCGCGCACCCGTGCG CGTGATGTGGCCGTGTGCTGTCGCGGGGCTCGAGGCCGTGCCGGCGCGTG GCTCGGCGGTGCTCGCGCCCAACCACCTCAGCTTCTTCGACTCGGTGCTG ATGATCATGTTGCTCGACCGCCCCGTGCACTTCATCGGCAAGGCGGACTA CCTCGATTCGTGGAAGACACGCCGGCTCTTCCCGGCGATGGGCATGATCC CGATCGATCGCGACAACGGCCTGAAGGCGATGGTGGCGCTCGACGCCGCC GCCGACGTCCTGCGCGACGGCGGCCTGCTGTGCGTGTTCCCCGAAGGCTC CCGCTCGCGCGACGGGCTGCTGCATCGGGGCTACGTCGGAGCCGCTCGGC TCGCGCTGGGCACCGACAGCCCCTTGCTCCCGGTGGGGATCATCGGCACC GACCGCATCCAGCCGCCGGGCGCCCGCCTGCCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig52719:62..544+

>mRNA_P-wetherbeei_contig52719.1.1 ID=mRNA_P-wetherbeei_contig52719.1.1|Name=mRNA_P-wetherbeei_contig52719.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig52719:62..544+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTCCGAGCGGTGCTTCGCGCACCCGTGCGCGTGATGTGGCCGTGTGC
TGTCGCGGGGCTCGAGGCCGTGCCGGCGCGTGGCTCGGCGGTGCTCGCGC
CCAACCACCTCAGCTTCTTCGACTCGGTGCTGATGATCATGTTGCTCGAC
CGCCCCGTGCACTTCATCGGCAAGGCGGACTACCTCGATTCGTGGAAGAC
ACGCCGGCTCTTCCCGGCGATGGGCATGATCCCGATCGATCGCGACAACG
GCCTGAAGGCGATGGTGGCGCTCGACGCCGCCGCCGACGTCCTGCGCGAC
GGCGGCCTGCTGTGCGTGTTCCCCGAAGGCTCCCGCTCGCGCGACGGGCT
GCTGCATCGGGGCTACGTCGGAGCCGCTCGGCTCGCGCTGGGCACCGACA
GCCCCTTGCTCCCGGTGGGGATCATCGGCACCGACCGCATCCAGCCGCCG
GGCGCCCGCCTGCCA
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