mRNA_P-wetherbeei_contig5271.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5271.1.1
Unique NamemRNA_P-wetherbeei_contig5271.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5271.1.1 vs. uniprot
Match: A0A818V4J0_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A818V4J0_9BILA)

HSP 1 Score: 216 bits (549), Expect = 2.830e-66
Identity = 118/238 (49.58%), Postives = 152/238 (63.87%), Query Frame = 1
Query:    1 MNILIPMGGKGTRFSKEGYRVAKPLINIVGRPMIFRLLDDLAITSADTLWIGMARELDAEFHLGTRLREEFSQFSLRVVHLDFQTRGAAETLYIMLQASPNIGRIANRGLWLRLRTISLDCDTIFFSDVLSEFRRLPAGCGASFYFQDDGDKPIYSYLRFAPGTRD-----VVDIREKVSISRHANTGAYGFASGARLRDVCRAALDAPVDRRSGEFYTSALIARMITDGNRFIGIPV 699
            MNILIPMGG G RFSKE YR  KPLINIVGRPM+F LLD+L     D +++G+   L+ +F+L   ++ E+       V +DF+TRGA ETL+IMLQ   N  R       L  +TISLDCDTI+F  +L +FRRLP+   ASF+F+D+G KP++SYL+      D     V D+REK+ IS HANTGAY F S   L+  C   LD  V   SGE+YT+ +I  M+ D  RF+GI V
Sbjct:    1 MNILIPMGGIGHRFSKENYRFPKPLINIVGRPMLFWLLDNLDTKEDDIIYLGLLESLEKQFNLVQTIKMEYPNRKFESVVIDFETRGAVETLFIMLQFL-NPDR-------LDCKTISLDCDTIYFQPILEKFRRLPSEINASFFFEDNGGKPVFSYLKLDENLTDEGYHSVTDVREKIMISTHANTGAYAFRSARILKQYCIQLLDEAVGS-SGEYYTTNIIKLMLEDQERFVGIEV 229          
BLAST of mRNA_P-wetherbeei_contig5271.1.1 vs. uniprot
Match: D7FRN4_ECTSI (Putative hydrolase (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN4_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 3.230e-66
Identity = 112/202 (55.45%), Postives = 145/202 (71.78%), Query Frame = 1
Query:   97 MIFRLLDDLAITSADTLWIGMARELDAEFHLGTRLREEFSQFSLRVVHLDFQTRGAAETLYIMLQASPNIGRIANRGLWLRLRTISLDCDTIFFSDVLSEFRRLPAGCGASFYFQDDGDKPIYSYLRFAPGTRDVVDIREKVSISRHANTGAYGFASGARLRDVCRAALDAPVDRRSGEFYTSALIARMITDGNRFIGIPVP 702
            M+F LLD+L +   DTLW+G+ +EL+ E+ +  RLR+E+    +RVV +DFQTRGAAETL+IMLQ   +          +R ++ISLDCDTI+FSDVL  FR   +GCG+SFYF+D+GDKPI+SY+ F P T  +V IREK +ISRHANTGAY F  G RLR  CR  LD PV + +GEFYTS++I RMI  G +F+GI VP
Sbjct:    1 MLFWLLDNLKLKPEDTLWVGVQQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSSAE--------IRRKSISLDCDTIYFSDVLGSFRACASGCGSSFYFEDEGDKPIFSYIEFEPSTDKIVYIREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGK-AGEFYTSSIIERMIQAGQKFVGIHVP 193          
BLAST of mRNA_P-wetherbeei_contig5271.1.1 vs. uniprot
Match: H1VD75_COLHI (Nucleotidyl transferase n=1 Tax=Colletotrichum higginsianum (strain IMI 349063) TaxID=759273 RepID=H1VD75_COLHI)

HSP 1 Score: 215 bits (547), Expect = 2.870e-65
Identity = 111/238 (46.64%), Postives = 156/238 (65.55%), Query Frame = 1
Query:    1 MNILIPMGGKGTRFSKEGYRVAKPLINIVGRPMIFRLLDDLAITSADTLWIGMARELDAEFHLGTRLREEFSQFSLRVVHLDFQTRGAAETLYIMLQASPNIGRIANRGLWLRLRTISLDCDTIFFSDVLSEFRRLPAGCGASFYFQDDGDKPIYSYLRFAP---GTRDVVDIREKVSISRHANTGAYGFASGARLRDVCRAALDA--PVDRRSGEFYTSALIARMITDGNRFIGIPV 699
            +N++IP+GG G+RF+KEGYR  KPLINIVGRPM+  L+D+L++   DTLW+ +  E+D EF +G  + + FS+   R++ L  QT+GA+ETLYI+ Q+             L  +T+SLDCDTI+++DVL + R +P G G  FYF D GDKPI+SY++  P   G   +VDI+EK +IS  ANTGAY F S  +L+      LD   P     GE+YTS +IA MI +G  ++G+PV
Sbjct:   27 INVIIPIGGIGSRFAKEGYRYPKPLINIVGRPMLLWLIDNLSLKPGDTLWMAINEEVDDEFRIGQLVSKTFSKIDFRLLRLRHQTKGASETLYIVTQSMTK--------KHLERKTVSLDCDTIYWADVLQDIRNMPKGHGGCFYFPDVGDKPIFSYIKTEPTKDGLERIVDIQEKKAISNKANTGAYVFPSAGQLKSWAAENLDMKRPDGSEVGEYYTSQMIALMIQNGVPYLGMPV 256          
BLAST of mRNA_P-wetherbeei_contig5271.1.1 vs. uniprot
Match: R8BM82_PHAM7 (Putative phosphatase iiic protein n=1 Tax=Phaeoacremonium minimum (strain UCR-PA7) TaxID=1286976 RepID=R8BM82_PHAM7)

HSP 1 Score: 222 bits (565), Expect = 4.830e-64
Identity = 114/236 (48.31%), Postives = 156/236 (66.10%), Query Frame = 1
Query:    1 MNILIPMGGKGTRFSKEGYRVAKPLINIVGRPMIFRLLDDLAITSADTLWIGMARELDAEFHLGTRLREEFSQFSLRVVHLDFQTRGAAETLYIMLQASPNIGRIANRGLWLRLRTISLDCDTIFFSDVLSEFRRLPAGCGASFYFQDDGDKPIYSYLRFAP--GTRDVVDIREKVSISRHANTGAYGFASGARLRDVCRAALDAPVDRRSGEFYTSALIARMITDGN-RFIGIPV 699
            +N++IP+GG G+RF+K+GYR  KPLINIVGRPM+  L+D+L++ S DTLW+ +  E+D EF +G  + + F +   R+  L  QT+GA+ETLYI+ Q+             L  +T+SLDCDTI++ DVL + RR+P G G  FYF DDGDKPI+SY++  P  G   +VDIREK +IS  ANTGAY F SGA L+      LD       GE+YTS  I++MI +G   F+G+PV
Sbjct:   19 INVIIPIGGIGSRFAKQGYRYPKPLINIVGRPMLMWLIDNLSLQSGDTLWMAVNEEIDNEFRIGQLITKSFPRIDFRLHRLRHQTKGASETLYIISQSMTKEH--------LTRKTVSLDCDTIYWGDVLEDVRRMPKGHGGCFYFTDDGDKPIFSYIKTEPKDGLERIVDIREKKAISNKANTGAYVFPSGAELKSWASKNLDKETSPEVGEYYTSQTISQMIFEGGIPFLGMPV 246          
BLAST of mRNA_P-wetherbeei_contig5271.1.1 vs. uniprot
Match: A0A815X3D1_ADIRI (Hypothetical protein n=4 Tax=Adineta ricciae TaxID=249248 RepID=A0A815X3D1_ADIRI)

HSP 1 Score: 217 bits (553), Expect = 6.460e-63
Identity = 117/239 (48.95%), Postives = 156/239 (65.27%), Query Frame = 1
Query:    1 MNILIPMGGKGTRFSKEGYRVAKPLINIVGRPMIFRLLDDLAITSADTLWIGMARELDAEFHLGTRLREEFSQFSLRVVHLDFQTRGAAETLYIMLQASPNIGRIANRGLWLRLRTISLDCDTIFFSDVLSEFRRLPAGCGASFYFQDDGDKPIYSYLRFAPGTRD------VVDIREKVSISRHANTGAYGFASGARLRDVCRAALDAPVDRRSGEFYTSALIARMITDGNRFIGIPV 699
            MNILIPMGG G RF++E YR  KPLI IVGRPM+F L+D L +   D +++G+   L+ +F L   LR E+ + + + V LDF TRGAAETL+IMLQ+  +  R+  +       TISLDCDTI+F  +L  FR+LPA   ASFYF+D G KPI+SYL+F     D      V D+ EK+ IS HANTGAY F+S + +++ C   LD  V   SGE+YT+ +I  M+TD   F+G+PV
Sbjct:    1 MNILIPMGGLGQRFTRENYRFPKPLIKIVGRPMLFWLIDYLDLKEDDIIYLGITEALEKQFALTQTLRVEYPKQTFKSVVLDFDTRGAAETLFIMLQSIDD-DRVERK-------TISLDCDTIYFKPILERFRQLPAHLNASFYFEDHGGKPIFSYLKFEHEPSDPEHPPVVTDVAEKIMISTHANTGAYAFSSTSIMKEYCIQLLDEAVGE-SGEYYTTHIIKLMLTDKEPFVGLPV 230          
BLAST of mRNA_P-wetherbeei_contig5271.1.1 vs. uniprot
Match: A0A819T6J3_9BILA (Hypothetical protein n=6 Tax=Adineta steineri TaxID=433720 RepID=A0A819T6J3_9BILA)

HSP 1 Score: 216 bits (549), Expect = 2.650e-62
Identity = 118/238 (49.58%), Postives = 152/238 (63.87%), Query Frame = 1
Query:    1 MNILIPMGGKGTRFSKEGYRVAKPLINIVGRPMIFRLLDDLAITSADTLWIGMARELDAEFHLGTRLREEFSQFSLRVVHLDFQTRGAAETLYIMLQASPNIGRIANRGLWLRLRTISLDCDTIFFSDVLSEFRRLPAGCGASFYFQDDGDKPIYSYLRFAPGTRD-----VVDIREKVSISRHANTGAYGFASGARLRDVCRAALDAPVDRRSGEFYTSALIARMITDGNRFIGIPV 699
            MNILIPMGG G RFSKE YR  KPLINIVGRPM+F LLD+L     D +++G+   L+ +F+L   ++ E+       V +DF+TRGA ETL+IMLQ   N  R       L  +TISLDCDTI+F  +L +FRRLP+   ASF+F+D+G KP++SYL+      D     V D+REK+ IS HANTGAY F S   L+  C   LD  V   SGE+YT+ +I  M+ D  RF+GI V
Sbjct:    1 MNILIPMGGIGHRFSKENYRFPKPLINIVGRPMLFWLLDNLDTKEDDIIYLGLLESLEKQFNLVQTIKMEYPNRKFESVVIDFETRGAVETLFIMLQFL-NPDR-------LDCKTISLDCDTIYFQPILEKFRRLPSEINASFFFEDNGGKPVFSYLKLDENLTDEGYHSVTDVREKIMISTHANTGAYAFRSARILKQYCIQLLDEAVGS-SGEYYTTNIIKLMLEDQERFVGIEV 229          
BLAST of mRNA_P-wetherbeei_contig5271.1.1 vs. uniprot
Match: A0A1L7WQ88_9HELO (Uncharacterized protein n=1 Tax=Phialocephala subalpina TaxID=576137 RepID=A0A1L7WQ88_9HELO)

HSP 1 Score: 218 bits (554), Expect = 3.560e-62
Identity = 116/238 (48.74%), Postives = 160/238 (67.23%), Query Frame = 1
Query:    1 MNILIPMGGKGTRFSKEGYRVAKPLINIVGRPMIFRLLDDLAITSADTLWIGMARELDAEFHLGTRLREEFSQFSLRVVHLDFQTRGAAETLYIMLQASPNIGRIANRGLWLRLRTISLDCDTIFFSDVLSEFRRLPAGCGASFYFQDDGDKPIYSYLRFAPGTRD---VVDIREKVSISRHANTGAYGFASGARLRDVCRAALDAPVDRRS-GEFYTSALIARMITDGNR-FIGIPV 699
            +NI+IP+GG G+RF+KEGYR  KPLINIVGRPMI RL+D+L++ S DTLW+    E+D EF LG  + + F +   + + L  QTRGA+ETLY + Q+  N          L+LRTISLDCDTI+++D+L++ R LP   GA FYF DDG KPI+SY++ +    +   +VDI+EK +IS  ANTGAY FA+ + L+     ++D+  +    GE+YTS LI  MI DG   F+GIP+
Sbjct:   22 LNIIIPIGGIGSRFTKEGYRYPKPLINIVGRPMILRLIDNLSLKSGDTLWMAANEEIDDEFRLGQLIMKTFPKLDFKFLRLKHQTRGASETLYAITQSMNNEH--------LQLRTISLDCDTIYWADILTQVRNLPIAHGAVFYFPDDGHKPIFSYIKTSSTLSENGLIVDIQEKKAISNKANTGAYVFATASLLQTWAAKSIDSNANGSEVGEYYTSQLIGMMIFDGKLPFLGIPL 251          
BLAST of mRNA_P-wetherbeei_contig5271.1.1 vs. uniprot
Match: A0A545VJR6_9HYPO (Phosphatase iiic n=1 Tax=Cordyceps javanica TaxID=43265 RepID=A0A545VJR6_9HYPO)

HSP 1 Score: 214 bits (545), Expect = 1.500e-61
Identity = 111/237 (46.84%), Postives = 156/237 (65.82%), Query Frame = 1
Query:    1 MNILIPMGGKGTRFSKEGYRVAKPLINIVGRPMIFRLLDDLAITSADTLWIGMARELDAEFHLGTRLREEFSQFSLRVVHLDFQTRGAAETLYIMLQASPNIGRIANRGLWLRLRTISLDCDTIFFSDVLSEFRRLPAGCGASFYFQDDGDKPIYSYLR--FAPGTRDVVDIREKVSISRHANTGAYGFASGARLRDVCRAALDAPV--DRRSGEFYTSALIARMITDGNRFIGIPV 699
            +N++IP+GG+GTRFSK+GYR  KPLINIVG+PMI  L+D+L +  +DTLWI +   +D  F LG  +R+ F+    RV+ L  QT+GA+ETLYI+ Q+  +          L  RT+SLDCDTI+++D+L + R +PAG G   YF DDGD PIYSY++         + +I+EK +I+  ANTGAY F SG++LR      LD P+  DR +GE++TS L+  MI +G  F  +PV
Sbjct:   10 LNVIIPIGGQGTRFSKQGYRYPKPLINIVGKPMIQWLIDNLTLRPSDTLWIAVNESVDDNFQLGQLIRKSFATLDARVLGLRHQTKGASETLYIVSQSMSSEH--------LAKRTVSLDCDTIYWTDILEKVRAMPAGYGGCIYFTDDGDFPIYSYIKTEHEDSVEKITEIQEKTAITNKANTGAYIFPSGSQLRHWAANHLDMPLTADRLAGEYFTSQLVGCMIENGVPFAALPV 238          
BLAST of mRNA_P-wetherbeei_contig5271.1.1 vs. uniprot
Match: W7N5K0_GIBM7 (Uncharacterized protein n=46 Tax=Fusarium TaxID=5506 RepID=W7N5K0_GIBM7)

HSP 1 Score: 213 bits (541), Expect = 7.080e-61
Identity = 109/238 (45.80%), Postives = 161/238 (67.65%), Query Frame = 1
Query:    1 MNILIPMGGKGTRFSKEGYRVAKPLINIVGRPMIFRLLDDLAITSADTLWIGMARELDAEFHLGTRLREEFSQFSLRVVHLDFQTRGAAETLYIMLQASPNIGRIANRGLWLRLRTISLDCDTIFFSDVLSEFRRLPAGCGASFYFQDDGDKPIYSYLRF---APGTRDVVDIREKVSISRHANTGAYGFASGARLRDVCRAALDA--PVDRRSGEFYTSALIARMITDGNRFIGIPV 699
            +N++IP+GG G+RF+KEGYR  KPLINIVG+PM+  L+D+L++   DTLWI +  ++D EF +G  + + F + +++++ L  QT+GA+ETLY++ Q+             L+ RT+SLDCDTI+++D+LS  R+LP+G G  FYF D GDKPI+SY++    +PG + +VDI+EK +IS  ANTGAY F S A L+      LD   P     GE+YTS +I+ M+  G  FIG+P+
Sbjct:   20 VNVIIPIGGIGSRFAKEGYRFPKPLINIVGQPMLLWLIDNLSLRPKDTLWIAVNEQIDHEFRIGQLVSKNFPKVNMKLLLLRHQTKGASETLYMVTQSMTKEH--------LQHRTVSLDCDTIYWNDILSSVRKLPSGHGGCFYFIDQGDKPIFSYIQTENESPGAQRIVDIQEKKAISNKANTGAYVFPSAADLKIWAAENLDVKHPDGAEVGEYYTSQVISMMVQSGVPFIGLPL 249          
BLAST of mRNA_P-wetherbeei_contig5271.1.1 vs. uniprot
Match: A0A2N3NKS2_9PEZI (Uncharacterized protein n=1 Tax=Lomentospora prolificans TaxID=41688 RepID=A0A2N3NKS2_9PEZI)

HSP 1 Score: 213 bits (543), Expect = 7.850e-61
Identity = 111/237 (46.84%), Postives = 152/237 (64.14%), Query Frame = 1
Query:    1 MNILIPMGGKGTRFSKEGYRVAKPLINIVGRPMIFRLLDDLAITSADTLWIGMARELDAEFHLGTRLREEFSQFSLRVVHLDFQTRGAAETLYIMLQASPNIGRIANRGLWLRLRTISLDCDTIFFSDVLSEFRRLPAGCGASFYFQDDGDKPIYSYLR--FAPGTRDVVDIREKVSISRHANTGAYGFASGARLRDVCRAALDAPVDR--RSGEFYTSALIARMITDGNRFIGIPV 699
            +N++IP+GG G+RFSK+GYR  KPLINIVGRPM+  L+D L   + DTLW+ +  ++D EF +G  + + F+    R++ L  QT+GA+ETLYI+ Q+ P           L  +T+SLDCDTI+++D+L + R +P G G  FYF D GDKPI+SY++  F  G   + DI+EK +I+R ANTGAY F S A LR      LD   D     GE+YTS +IA MI     F+GIPV
Sbjct:   49 INVIIPIGGIGSRFSKQGYRYPKPLINIVGRPMLLWLIDSLVFKARDTLWLAVNEDIDDEFRIGQLVAKSFTNLDFRLIRLRHQTKGASETLYIVTQSMP--------ASHLSRKTVSLDCDTIYWADILQDIRDMPRGHGGCFYFMDHGDKPIFSYIKTEFRHGLERIADIQEKKAITRKANTGAYVFPSAAELRVWAAHNLDLKRDDGFELGEYYTSQVIALMIQRNVPFLGIPV 277          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5271.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A818V4J0_9BILA2.830e-6649.58Hypothetical protein n=1 Tax=Adineta steineri TaxI... [more]
D7FRN4_ECTSI3.230e-6655.45Putative hydrolase (ISS) n=1 Tax=Ectocarpus silicu... [more]
H1VD75_COLHI2.870e-6546.64Nucleotidyl transferase n=1 Tax=Colletotrichum hig... [more]
R8BM82_PHAM74.830e-6448.31Putative phosphatase iiic protein n=1 Tax=Phaeoacr... [more]
A0A815X3D1_ADIRI6.460e-6348.95Hypothetical protein n=4 Tax=Adineta ricciae TaxID... [more]
A0A819T6J3_9BILA2.650e-6249.58Hypothetical protein n=6 Tax=Adineta steineri TaxI... [more]
A0A1L7WQ88_9HELO3.560e-6248.74Uncharacterized protein n=1 Tax=Phialocephala suba... [more]
A0A545VJR6_9HYPO1.500e-6146.84Phosphatase iiic n=1 Tax=Cordyceps javanica TaxID=... [more]
W7N5K0_GIBM77.080e-6145.80Uncharacterized protein n=46 Tax=Fusarium TaxID=55... [more]
A0A2N3NKS2_9PEZI7.850e-6146.84Uncharacterized protein n=1 Tax=Lomentospora proli... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5271contigP-wetherbeei_contig5271:74..1348 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FRN4
PFAMsNTP_transf_3,NTP_transferase
Model size702
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue5.29e-67
EggNOG OGs28NC4@1|root,2QUXI@2759|Eukaryota
Cds size702
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186789.9988093-CDS-P-wetherbeei_contig5271:73..3191683186789.9988093-CDS-P-wetherbeei_contig5271:73..319Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5271 74..319 -
1683186790.0157177-CDS-P-wetherbeei_contig5271:615..7301683186790.0157177-CDS-P-wetherbeei_contig5271:615..730Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5271 616..730 -
1683186790.0328-CDS-P-wetherbeei_contig5271:890..11931683186790.0328-CDS-P-wetherbeei_contig5271:890..1193Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5271 891..1193 -
1683186790.0431914-CDS-P-wetherbeei_contig5271:1310..13481683186790.0431914-CDS-P-wetherbeei_contig5271:1310..1348Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5271 1311..1348 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5271.1.1prot_P-wetherbeei_contig5271.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5271 74..1348 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5271.1.1

>prot_P-wetherbeei_contig5271.1.1 ID=prot_P-wetherbeei_contig5271.1.1|Name=mRNA_P-wetherbeei_contig5271.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=234bp
MNILIPMGGKGTRFSKEGYRVAKPLINIVGRPMIFRLLDDLAITSADTLW
IGMARELDAEFHLGTRLREEFSQFSLRVVHLDFQTRGAAETLYIMLQASP
NIGRIANRGLWLRLRTISLDCDTIFFSDVLSEFRRLPAGCGASFYFQDDG
DKPIYSYLRFAPGTRDVVDIREKVSISRHANTGAYGFASGARLRDVCRAA
LDAPVDRRSGEFYTSALIARMITDGNRFIGIPVP
back to top

mRNA from alignment at P-wetherbeei_contig5271:74..1348-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5271.1.1 ID=mRNA_P-wetherbeei_contig5271.1.1|Name=mRNA_P-wetherbeei_contig5271.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1275bp|location=Sequence derived from alignment at P-wetherbeei_contig5271:74..1348- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACATCCTGATTCCCATGGGTGGAAAGGGTACCAGGTTTGTAAGCCC TTTGAGCCAGGAAATCCCCTCTACCGGTCGCATCTTCGCTTATCGCGTTT GCCACAACACGCCCTTGACACCGCTTTCTCCCAAAACTCCCCCGTTTGAA CACAGGTTCTCCAAAGAAGGGTATCGCGTAGCGAAGCCCTTGATCAACAT CGTGGGGCGGCCGATGATCTTCCGATTGCTCGACGACCTCGCAATCACCT CTGCCGACACGCTGTGGATCGGCATGGCCCGCGAACTCGACGCCGAATTC CACTTGGGAACGCGGCTTAGAGAAGAGTTTTCCCAGTTCTCGCTGCGTGT TGTCCACCTGGACTTTCAGACCCGTGGGGCAGCCGAGACTTTATACATCA TGTTGCAGGCGAGCCCAAACATCGGCCGAATCGCCAATCGAGGGCTTTGG CTTCGGTTGTCTTTATTTTTTACCACGATCAAGGAAACGTCATCTCTTTG GCGTCCCTTTTAGTCTCTGTACTCCTCTCCCCTCCTTAGCTTCCTTCGCC GAACCGGCGGTGCCTTGTCCGCGGCCGCCACCTTCCAAGCAGAACATGAC CGCCGCGGAGCGGGCGAGGAGAACGATCTCGCTGGACTGCGACACCATCT TCTTCTCCGACGTCCTGTCGGAATTCAGGCGCTTGCCAGCCGGCTGCGGC GCCAGCTTTTACTTTCAAGACGACGGAGACAAGGTGGGTGATGAACGTAT CGTGCAGGCGCGGGTGTGTATGTCTTTCTCGCTTCAATACGCCGAAAGCT TGCTCCTGCAAGATCTCGCCTCGCTTTCTCGCATCCTCTTTCGAGGTGCC TGCATTTCGCCACCGGGGCTGCGTTTAGTGCTGCATCTGCCGCTAAGCAA GCTCGCGGATGTTCCTTCGGGCTCCGGCTAACGCGTTCCTGATAAATCCT TTGCCGCCACCGCCCACCGCTCCACCCCAAAACGGCGCGCCGCCGCCGCT GCCAAACGGTTGTCCATGCCTTGCCGCAGCCCATCTACTCCTACCTCCGC TTTGCGCCGGGCACCCGCGACGTCGTCGACATCCGCGAGAAGGTTTCCAT CTCACGTCACGCCAACACGGGCGCGTACGGCTTTGCATCCGGTGCACGGC TGCGGGATGTGTGTCGGGCGGCGCTGGATGCACCGGTCGACCGCCGCTCC GGCGAGTTCTACACGTCGGCGCTGATCGCGCGGATGATTACCGACGGGAA CCGCTTCATCGGGATCCCCGTGCCG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig5271:74..1348-

>mRNA_P-wetherbeei_contig5271.1.1 ID=mRNA_P-wetherbeei_contig5271.1.1|Name=mRNA_P-wetherbeei_contig5271.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=702bp|location=Sequence derived from alignment at P-wetherbeei_contig5271:74..1348- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACATCCTGATTCCCATGGGTGGAAAGGGTACCAGGTTCTCCAAAGA
AGGGTATCGCGTAGCGAAGCCCTTGATCAACATCGTGGGGCGGCCGATGA
TCTTCCGATTGCTCGACGACCTCGCAATCACCTCTGCCGACACGCTGTGG
ATCGGCATGGCCCGCGAACTCGACGCCGAATTCCACTTGGGAACGCGGCT
TAGAGAAGAGTTTTCCCAGTTCTCGCTGCGTGTTGTCCACCTGGACTTTC
AGACCCGTGGGGCAGCCGAGACTTTATACATCATGTTGCAGGCGAGCCCA
AACATCGGCCGAATCGCCAATCGAGGGCTTTGGCTTCGGTTGAGAACGAT
CTCGCTGGACTGCGACACCATCTTCTTCTCCGACGTCCTGTCGGAATTCA
GGCGCTTGCCAGCCGGCTGCGGCGCCAGCTTTTACTTTCAAGACGACGGA
GACAAGCCCATCTACTCCTACCTCCGCTTTGCGCCGGGCACCCGCGACGT
CGTCGACATCCGCGAGAAGGTTTCCATCTCACGTCACGCCAACACGGGCG
CGTACGGCTTTGCATCCGGTGCACGGCTGCGGGATGTGTGTCGGGCGGCG
CTGGATGCACCGGTCGACCGCCGCTCCGGCGAGTTCTACACGTCGGCGCT
GATCGCGCGGATGATTACCGACGGGAACCGCTTCATCGGGATCCCCGTGC
CG
back to top