mRNA_P-wetherbeei_contig52707.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52707.1.1 vs. uniprot
Match: A0A1F4F1T5_9PROT (Peptide ABC transporter permease n=5 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4F1T5_9PROT) HSP 1 Score: 327 bits (837), Expect = 1.530e-109 Identity = 168/181 (92.82%), Postives = 175/181 (96.69%), Query Frame = 1
Query: 1 LGRDLLSRIVYGTRISLTVGLLGILVSFLIGITLGGISGYFGGWIDNVIQRFIEMVRSFPELPLWMALSAALPVTWSPILVYFGITIILGLLDWPGLARSVRSKLLALREEDFANAAVLMGASPARVIRRHLLPSFASHLIASVTLSVPSMILGETALSFLGLGLRPPVTSWGVLLNEAQN 543
LGRDLLSRI+YGTRISLTVGLLGILVSF+IGITLGGISGY+GGW+DN+IQRFIEMVRSFPELPLWMALSAALPV WSP+LVYFGITIILGLLDWPGLAR+VRSKLLALREEDFA AAVLMGA P RVI RHLLPSFASHLIASVTLSVP MILGETALSFLGLGLRPPVTSWGVLLNEAQN
Sbjct: 170 LGRDLLSRILYGTRISLTVGLLGILVSFVIGITLGGISGYYGGWLDNLIQRFIEMVRSFPELPLWMALSAALPVNWSPLLVYFGITIILGLLDWPGLARAVRSKLLALREEDFAAAAVLMGAGPGRVIGRHLLPSFASHLIASVTLSVPGMILGETALSFLGLGLRPPVTSWGVLLNEAQN 350
BLAST of mRNA_P-wetherbeei_contig52707.1.1 vs. uniprot
Match: A0A536WL82_9PROT (ABC transporter permease n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536WL82_9PROT) HSP 1 Score: 325 bits (834), Expect = 4.360e-109 Identity = 166/181 (91.71%), Postives = 174/181 (96.13%), Query Frame = 1
Query: 1 LGRDLLSRIVYGTRISLTVGLLGILVSFLIGITLGGISGYFGGWIDNVIQRFIEMVRSFPELPLWMALSAALPVTWSPILVYFGITIILGLLDWPGLARSVRSKLLALREEDFANAAVLMGASPARVIRRHLLPSFASHLIASVTLSVPSMILGETALSFLGLGLRPPVTSWGVLLNEAQN 543
LGRDL SRIVYGTRISLTVGL GI+VSF+IG+TLGGISGY+GGWID VIQRFIEMVRSFPELPLWMALSAALPV WSPILVYFGITIILGLLDWPGLAR+VRSKLLALREEDFA AA+LMGASPARVI RHLLPSFASHLIAS TLSVP+MILGETALSFLGLGLRPP+TSWGVLLNEAQN
Sbjct: 165 LGRDLFSRIVYGTRISLTVGLFGIVVSFIIGLTLGGISGYYGGWIDTVIQRFIEMVRSFPELPLWMALSAALPVNWSPILVYFGITIILGLLDWPGLARAVRSKLLALREEDFATAAILMGASPARVIGRHLLPSFASHLIASATLSVPAMILGETALSFLGLGLRPPITSWGVLLNEAQN 345
BLAST of mRNA_P-wetherbeei_contig52707.1.1 vs. uniprot
Match: UPI0019B9F062 (ABC transporter permease n=1 Tax=Rhodoferax sp. TaxID=50421 RepID=UPI0019B9F062) HSP 1 Score: 323 bits (827), Expect = 5.190e-108 Identity = 165/181 (91.16%), Postives = 174/181 (96.13%), Query Frame = 1
Query: 1 LGRDLLSRIVYGTRISLTVGLLGILVSFLIGITLGGISGYFGGWIDNVIQRFIEMVRSFPELPLWMALSAALPVTWSPILVYFGITIILGLLDWPGLARSVRSKLLALREEDFANAAVLMGASPARVIRRHLLPSFASHLIASVTLSVPSMILGETALSFLGLGLRPPVTSWGVLLNEAQN 543
LGRDLLSRI+YGTRISLTVGLLGI VSF+IGITLGGISGY+GGWID VIQR IE+VRSFPELPLWMALSAALPVTWSPIL+YFGITIILG+LDWPGLAR+VRSK LALREEDFA AAVLMGASPARVI RHLLPSF SHLIAS+TLSVPSMILGETALSFLGLGLRPP+TSWGVLLNEAQN
Sbjct: 171 LGRDLLSRIIYGTRISLTVGLLGIAVSFVIGITLGGISGYYGGWIDTVIQRLIEVVRSFPELPLWMALSAALPVTWSPILIYFGITIILGMLDWPGLARAVRSKFLALREEDFAAAAVLMGASPARVIGRHLLPSFTSHLIASLTLSVPSMILGETALSFLGLGLRPPITSWGVLLNEAQN 351
BLAST of mRNA_P-wetherbeei_contig52707.1.1 vs. uniprot
Match: A0A0S8B4T1_9PROT (Peptide ABC transporter permease n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8B4T1_9PROT) HSP 1 Score: 322 bits (825), Expect = 1.040e-107 Identity = 164/181 (90.61%), Postives = 172/181 (95.03%), Query Frame = 1
Query: 1 LGRDLLSRIVYGTRISLTVGLLGILVSFLIGITLGGISGYFGGWIDNVIQRFIEMVRSFPELPLWMALSAALPVTWSPILVYFGITIILGLLDWPGLARSVRSKLLALREEDFANAAVLMGASPARVIRRHLLPSFASHLIASVTLSVPSMILGETALSFLGLGLRPPVTSWGVLLNEAQN 543
LGRDLLSRI+YGTRISLTVGL GI+VSF IGI LGGISGY+GGWIDN+IQRFIEMVR+FPELPLWMALSAALPVTWSPILVYFGITIILGLLDWPGLAR+VRSKLLALREEDFA AAVLMGA P RVI RHLLPSFASHLIAS TL+VP MILGETALSFLGLGLRPP+TSWGVLLNEAQN
Sbjct: 171 LGRDLLSRIIYGTRISLTVGLFGIMVSFTIGIVLGGISGYYGGWIDNLIQRFIEMVRAFPELPLWMALSAALPVTWSPILVYFGITIILGLLDWPGLARAVRSKLLALREEDFAAAAVLMGAGPGRVIARHLLPSFASHLIASATLAVPGMILGETALSFLGLGLRPPITSWGVLLNEAQN 351
BLAST of mRNA_P-wetherbeei_contig52707.1.1 vs. uniprot
Match: A0A1F3YU29_9PROT (Peptide ABC transporter permease n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YU29_9PROT) HSP 1 Score: 320 bits (821), Expect = 3.480e-107 Identity = 164/181 (90.61%), Postives = 175/181 (96.69%), Query Frame = 1
Query: 1 LGRDLLSRIVYGTRISLTVGLLGILVSFLIGITLGGISGYFGGWIDNVIQRFIEMVRSFPELPLWMALSAALPVTWSPILVYFGITIILGLLDWPGLARSVRSKLLALREEDFANAAVLMGASPARVIRRHLLPSFASHLIASVTLSVPSMILGETALSFLGLGLRPPVTSWGVLLNEAQN 543
LGRD+LSRI++GTRISLTVGLLGI VSFLIGI LGGISGY+GGWID++IQRFIEMVRSFPELPLWMALSAALPV WSP+LVYFGITIILGLLDWPGLAR+VRSKLLALREE+FA AAVLMGA+P RVI RHLLPSFASHLIAS+TLSVPSMILGETALSFLGLGLRPPVTSWGVLLNEAQN
Sbjct: 165 LGRDVLSRIIHGTRISLTVGLLGIAVSFLIGIILGGISGYYGGWIDSLIQRFIEMVRSFPELPLWMALSAALPVNWSPVLVYFGITIILGLLDWPGLARAVRSKLLALREEEFATAAVLMGATPGRVIGRHLLPSFASHLIASLTLSVPSMILGETALSFLGLGLRPPVTSWGVLLNEAQN 345
BLAST of mRNA_P-wetherbeei_contig52707.1.1 vs. uniprot
Match: A0A516H6R0_9PROT (ABC transporter permease n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A516H6R0_9PROT) HSP 1 Score: 315 bits (808), Expect = 4.070e-105 Identity = 158/181 (87.29%), Postives = 170/181 (93.92%), Query Frame = 1
Query: 1 LGRDLLSRIVYGTRISLTVGLLGILVSFLIGITLGGISGYFGGWIDNVIQRFIEMVRSFPELPLWMALSAALPVTWSPILVYFGITIILGLLDWPGLARSVRSKLLALREEDFANAAVLMGASPARVIRRHLLPSFASHLIASVTLSVPSMILGETALSFLGLGLRPPVTSWGVLLNEAQN 543
LGRD+ SR+VYGTRISLTVGL GI +SF+IGI LGGISGY+GGWIDNVIQR IE++RS PELPLWMALSAALPVTWSPILVYFGITIILGLLDWPGLAR+VRSKLLALREEDFA AA LMGASP+R+I RHLLPSF SHLIAS TLS+PSMILGETALSFLGLGLRPP+TSWGVLLNEAQN
Sbjct: 172 LGRDIFSRVVYGTRISLTVGLFGIAISFIIGIVLGGISGYYGGWIDNVIQRLIELIRSLPELPLWMALSAALPVTWSPILVYFGITIILGLLDWPGLARAVRSKLLALREEDFATAAQLMGASPSRIIGRHLLPSFMSHLIASATLSIPSMILGETALSFLGLGLRPPITSWGVLLNEAQN 352
BLAST of mRNA_P-wetherbeei_contig52707.1.1 vs. uniprot
Match: A0A1G3INL2_9PROT (Peptide ABC transporter permease n=1 Tax=Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_67_15 TaxID=1802023 RepID=A0A1G3INL2_9PROT) HSP 1 Score: 313 bits (801), Expect = 5.150e-104 Identity = 163/181 (90.06%), Postives = 167/181 (92.27%), Query Frame = 1
Query: 1 LGRDLLSRIVYGTRISLTVGLLGILVSFLIGITLGGISGYFGGWIDNVIQRFIEMVRSFPELPLWMALSAALPVTWSPILVYFGITIILGLLDWPGLARSVRSKLLALREEDFANAAVLMGASPARVIRRHLLPSFASHLIASVTLSVPSMILGETALSFLGLGLRPPVTSWGVLLNEAQN 543
LGRDL SRIVYGTRISLTVGLLGI+VSF IGITLGGISGYFGG ID +IQRFIEMV SFPELPLWMALSAALPV WSPILVYFGITIILGLLDWPGLAR+VRSKLLALREEDF AAVLMGA P RVI RHLLPSF SHLIAS TLSVP MI+GETALSFLGLGLRPPVTSWGVLLNEAQN
Sbjct: 171 LGRDLFSRIVYGTRISLTVGLLGIIVSFTIGITLGGISGYFGGRIDTLIQRFIEMVSSFPELPLWMALSAALPVNWSPILVYFGITIILGLLDWPGLARAVRSKLLALREEDFVTAAVLMGAGPGRVIGRHLLPSFTSHLIASATLSVPGMIMGETALSFLGLGLRPPVTSWGVLLNEAQN 351
BLAST of mRNA_P-wetherbeei_contig52707.1.1 vs. uniprot
Match: A0A7S8HCG7_9HYPH (ABC transporter permease n=1 Tax=Kaustia mangrovi TaxID=2593653 RepID=A0A7S8HCG7_9HYPH) HSP 1 Score: 312 bits (799), Expect = 1.000e-103 Identity = 154/181 (85.08%), Postives = 172/181 (95.03%), Query Frame = 1
Query: 1 LGRDLLSRIVYGTRISLTVGLLGILVSFLIGITLGGISGYFGGWIDNVIQRFIEMVRSFPELPLWMALSAALPVTWSPILVYFGITIILGLLDWPGLARSVRSKLLALREEDFANAAVLMGASPARVIRRHLLPSFASHLIASVTLSVPSMILGETALSFLGLGLRPPVTSWGVLLNEAQN 543
LGRD+LSRIVYGTRISLTVGL+GI +SFLIGITLGG++GY+GGW+D+++QR IE++RS PELPLW+ALSAALPVTWSPIL+YFGITIILGLLDWPGLAR+VRSKLLALREEDFA AAVLMGA P RVI RHLLP+F SHLIAS TLSVP+MILGETALSFLGLGLRPP+TSWGVLLNEAQN
Sbjct: 174 LGRDMLSRIVYGTRISLTVGLIGITISFLIGITLGGLAGYYGGWVDSIVQRMIEILRSLPELPLWLALSAALPVTWSPILIYFGITIILGLLDWPGLARAVRSKLLALREEDFATAAVLMGAKPGRVIGRHLLPNFMSHLIASATLSVPAMILGETALSFLGLGLRPPITSWGVLLNEAQN 354
BLAST of mRNA_P-wetherbeei_contig52707.1.1 vs. uniprot
Match: A0A3B0T6U0_9ZZZZ (ABC transporter, permease protein 2 (Cluster 5, nickel/peptides/opines) (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0T6U0_9ZZZZ) HSP 1 Score: 307 bits (787), Expect = 3.630e-102 Identity = 154/181 (85.08%), Postives = 167/181 (92.27%), Query Frame = 1
Query: 1 LGRDLLSRIVYGTRISLTVGLLGILVSFLIGITLGGISGYFGGWIDNVIQRFIEMVRSFPELPLWMALSAALPVTWSPILVYFGITIILGLLDWPGLARSVRSKLLALREEDFANAAVLMGASPARVIRRHLLPSFASHLIASVTLSVPSMILGETALSFLGLGLRPPVTSWGVLLNEAQN 543
LGRD+ SRI YGTRISLTVGLLGI +SFL GI LGG+SGY+GGWIDNVIQR IE++RS PELPLW+ALSAALPVTWSPILV+ GIT+ILGLLDWPGLAR+VRSKLLALREEDFA AAVLMGA P RVI RHLLPSFASHLIAS +LS+P MILGETALSFLGLGLRPP+TSWGVLLNEAQN
Sbjct: 179 LGRDMFSRITYGTRISLTVGLLGITISFLFGIILGGLSGYYGGWIDNVIQRVIEIIRSLPELPLWLALSAALPVTWSPILVFLGITVILGLLDWPGLARAVRSKLLALREEDFATAAVLMGAKPKRVIARHLLPSFASHLIASASLSIPGMILGETALSFLGLGLRPPITSWGVLLNEAQN 359
BLAST of mRNA_P-wetherbeei_contig52707.1.1 vs. uniprot
Match: UPI001FE554EF (ABC transporter permease n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI001FE554EF) HSP 1 Score: 306 bits (785), Expect = 3.850e-102 Identity = 153/181 (84.53%), Postives = 168/181 (92.82%), Query Frame = 1
Query: 1 LGRDLLSRIVYGTRISLTVGLLGILVSFLIGITLGGISGYFGGWIDNVIQRFIEMVRSFPELPLWMALSAALPVTWSPILVYFGITIILGLLDWPGLARSVRSKLLALREEDFANAAVLMGASPARVIRRHLLPSFASHLIASVTLSVPSMILGETALSFLGLGLRPPVTSWGVLLNEAQN 543
LGRD+LSRIVYGTRISLTVGLLGI+VSF +GI +GGI+GY+GGWIDN+IQRFIE+VRSFPELPLWMALSAALPVTW+PI VYFGIT+ILGLLDW GLAR+VRSKLLALREEDF AA LMGA P+R+I RHLLPSF SHLIAS TLS+P MILGETALSFLGLGLRPP+TSWGVLL EAQN
Sbjct: 135 LGRDVLSRIVYGTRISLTVGLLGIIVSFTLGIVIGGIAGYYGGWIDNIIQRFIEIVRSFPELPLWMALSAALPVTWNPIFVYFGITLILGLLDWTGLARAVRSKLLALREEDFTTAAQLMGARPSRIIGRHLLPSFMSHLIASATLSIPGMILGETALSFLGLGLRPPITSWGVLLTEAQN 315 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52707.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52707.1.1 >prot_P-wetherbeei_contig52707.1.1 ID=prot_P-wetherbeei_contig52707.1.1|Name=mRNA_P-wetherbeei_contig52707.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=181bp LGRDLLSRIVYGTRISLTVGLLGILVSFLIGITLGGISGYFGGWIDNVIQback to top mRNA from alignment at P-wetherbeei_contig52707:2..544+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52707.1.1 ID=mRNA_P-wetherbeei_contig52707.1.1|Name=mRNA_P-wetherbeei_contig52707.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=543bp|location=Sequence derived from alignment at P-wetherbeei_contig52707:2..544+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52707:2..544+ >mRNA_P-wetherbeei_contig52707.1.1 ID=mRNA_P-wetherbeei_contig52707.1.1|Name=mRNA_P-wetherbeei_contig52707.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=543bp|location=Sequence derived from alignment at P-wetherbeei_contig52707:2..544+ (Phaeothamnion wetherbeei SAG_119_79)back to top |