mRNA_P-wetherbeei_contig5269.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Match: A0A6H5KE80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE80_9PHAE) HSP 1 Score: 267 bits (682), Expect = 4.350e-84 Identity = 139/192 (72.40%), Postives = 160/192 (83.33%), Query Frame = 2
Query: 566 SRNVKWVRVASKPIGVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKTLKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFFETSAKDDTNVYNVFVELSKHLPEREPPPAPAKIDLSTSPS-SSSSCC 1138
SR VK V + GVGKSSLV RFVTNNFKPYSESTIGASFMSKMIM++ +P+KFQIWDTAGQEKYHSLAPMYYRGAGAAI+VYDIT SF+TLK+W+ ELQ QGP DI IA+AGNKRDLE+ REVE S A+AYA+EIGAMF ETSAKD T+V ++FVELSK LP+REP P + +DL+ S +SSSCC
Sbjct: 11 SREVKVVLLGDT--GVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQREVESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSSGASSSCC 200
BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Match: F0WNT1_9STRA (Rab5 family GTPase putative n=3 Tax=Albugo TaxID=65356 RepID=F0WNT1_9STRA) HSP 1 Score: 241 bits (615), Expect = 4.470e-74 Identity = 122/167 (73.05%), Postives = 141/167 (84.43%), Query Frame = 2
Query: 566 SRNVKWVRVASKPIGVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKTLKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFFETSAKDDTNVYNVFVELSKHLP 1066
+R VK V + GVGKSSLVLRFVTNNF+PYSESTIGASFMSKMIM+E TPIK+QIWDTAGQEKYHSLAPMYYRGA AAI+VYDIT +QS TLK+WV EL+Q GP +IVIAIAGNK DLE REV + A+AYA+EIGA+F ETSAK+DTNV ++F+ +SK LP
Sbjct: 8 AREVKVVLLGDT--GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIMVENTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLATLKNWVKELKQLGPENIVIAIAGNKSDLEDKREVPSAQAKAYADEIGALFIETSAKEDTNVSDLFISISKQLP 172
BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Match: D0N0I0_PHYIT (Rab5 family GTPase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N0I0_PHYIT) HSP 1 Score: 238 bits (608), Expect = 5.320e-73 Identity = 122/170 (71.76%), Postives = 141/170 (82.94%), Query Frame = 2
Query: 557 NRISRNVKWVRVASKPIGVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKTLKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFFETSAKDDTNVYNVFVELSKHLP 1066
N +R VK V + GVGKSSLVLRFVTNNF+PYSESTIGASFMSKMI++ TPIK+QIWDTAGQEKYHSLAPMYYRGA AAI+VYDIT +QS TLK+WV EL+Q GP +IVIAIAGNK DLE REV S ARAYA EIGA+F ETSAK+DTNV ++F+++S+ LP
Sbjct: 6 NSKAREVKVVLLGDT--GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKREVPASQARAYAGEIGALFIETSAKEDTNVSDLFIQISQALP 173
BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Match: K3X978_GLOUD (Uncharacterized protein n=22 Tax=Oomycota TaxID=4762 RepID=K3X978_GLOUD) HSP 1 Score: 238 bits (607), Expect = 7.270e-73 Identity = 121/167 (72.46%), Postives = 140/167 (83.83%), Query Frame = 2
Query: 566 SRNVKWVRVASKPIGVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKTLKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFFETSAKDDTNVYNVFVELSKHLP 1066
+R VK V + GVGKSSLVLRFVTNNF+PYSESTIGASFMSKMI++ TPIK+QIWDTAGQEKYHSLAPMYYRGA AAI+VYDIT +QS TLK+WV EL+Q GP +IVIAIAGNK DLE REV S ARAYAEEIGA+F ETSAK+D NV ++F+++S+ LP
Sbjct: 8 AREVKVVLLGDT--GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKREVPASQARAYAEEIGALFIETSAKEDRNVSDLFIQISQALP 172
BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Match: A0A7S2SUM8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUM8_9STRA) HSP 1 Score: 232 bits (591), Expect = 1.730e-70 Identity = 120/192 (62.50%), Postives = 145/192 (75.52%), Query Frame = 2
Query: 566 SRNVKWVRVASKPIGVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKTLKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFFETSAKDDTNVYNVFVELSKHLPEREPPPA-PAKIDLSTSPSSSSSCC 1138
+R VK V + GVGKSSLVLRF+TN FK Y ESTIGASFMSK+IM++ +PIKFQIWDTAGQEKYHSLAPMYY+GA AAI+VYDIT +F+TLKDWV EL+ QGP +IVIA+AGNK DLE++REV+ +TA++YA IGA F ETSAK NV +F +SK LPE+E K++L SS CC
Sbjct: 9 AREVKVVLLGDT--GVGKSSLVLRFITNEFKQYQESTIGASFMSKLIMVDGSPIKFQIWDTAGQEKYHSLAPMYYKGAAAAIVVYDITKESTFQTLKDWVAELRSQGPENIVIAVAGNKSDLESEREVDTATAQSYAHSIGASFLETSAKTKANVDEIFSNISKQLPEQERAGQYHNKLNLKAGKGSSGGCC 198
BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Match: A0A067CI89_SAPPC (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CI89_SAPPC) HSP 1 Score: 228 bits (581), Expect = 5.190e-69 Identity = 116/167 (69.46%), Postives = 138/167 (82.63%), Query Frame = 2
Query: 566 SRNVKWVRVASKPIGVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKTLKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFFETSAKDDTNVYNVFVELSKHLP 1066
+R VK V + GVGKSSLVLRFVTNNF+PYSESTIGASFMSKM+++ IK+QIWDTAGQEKYHSLAPMYYRGA AAI+VYDIT +QS +TLK+WV EL+Q GP +IVIAIAGNK DL+ REV TA+AYA+EIGA+F ETSAK+DTNV ++F +S+ LP
Sbjct: 7 AREVKVVLLGDT--GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMLLVGDQAIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLQTLKNWVKELKQLGPDNIVIAIAGNKSDLKDKREVSSETAKAYADEIGAVFIETSAKEDTNVSDLFKTISQQLP 171
BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Match: A0A7S1CIP5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIP5_9STRA) HSP 1 Score: 230 bits (586), Expect = 1.430e-68 Identity = 117/168 (69.64%), Postives = 136/168 (80.95%), Query Frame = 2
Query: 566 SRNVKWVRVASKPIGVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKTLKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFFETSAKDDTNVYNVFVELSKHLPE 1069
+R VK V + GVGKSSLVLRFVTNNFKPYSESTIGASFM+KM++I++TPIK+QIWDTAGQEKYHSLAPMYYRGA AAI+VYDIT SF TLK+WV EL+Q GP DIVIAIAGNK DL REVE AR YA IGA++ ETSAK D+NV +FV+++ LP+
Sbjct: 89 AREVKVVLLGDT--GVGKSSLVLRFVTNNFKPYSESTIGASFMAKMMIIDSTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRAASFATLKNWVRELKQLGPEDIVIAIAGNKSDLAPQREVEEEDAREYARSIGALYIETSAKTDSNVKQLFVDIAMRLPD 254
BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Match: A0A3R7AA57_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AA57_9STRA) HSP 1 Score: 228 bits (581), Expect = 1.840e-66 Identity = 116/167 (69.46%), Postives = 138/167 (82.63%), Query Frame = 2
Query: 566 SRNVKWVRVASKPIGVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKTLKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFFETSAKDDTNVYNVFVELSKHLP 1066
+R VK V + GVGKSSLVLRFVTNNF+PYSESTIGASFMSKM+++ IK+QIWDTAGQEKYHSLAPMYYRGA AAI+VYDIT +QS TLK+WV EL+Q GP +IVIAIAGNK DL+ REV +TA+AYA+EIGA+F ETSAK+DTNV ++F +S+ LP
Sbjct: 199 AREVKVVLLGDT--GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMLLVGDQAIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLVTLKNWVKELKQLGPDNIVIAIAGNKSDLDDKREVSSATAKAYADEIGAVFIETSAKEDTNVLDLFKTISQQLP 363
BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Match: A0A5D6XGD9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XGD9_9STRA) HSP 1 Score: 239 bits (609), Expect = 3.400e-65 Identity = 124/184 (67.39%), Postives = 145/184 (78.80%), Query Frame = 2
Query: 515 AVTIVRSSPRSPFYNRISRNVKWVRVASKPIGVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKTLKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFFETSAKDDTNVYNVFVELSKHLP 1066
A+ + P S +R VK V + GVGKSSLVLRFVTNNF+PYSESTIGASFMSKMI++ TPIK+QIWDTAGQEKYHSLAPMYYRGA AAI+VYDIT +QS TLK+WV EL+Q GP +IVIAIAGNK DLE REV S ARAYAEEIGA+F ETSAK+D NV ++F+++S+ LP
Sbjct: 1201 ALRVASVKPASMADGGKAREVKVVLLGDT--GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLATLKNWVKELKQLGPDNIVIAIAGNKSDLEEKREVPASQARAYAEEIGALFIETSAKEDRNVSDLFIQISQALP 1382
BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Match: A0A7S1CIJ3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIJ3_9STRA) HSP 1 Score: 214 bits (546), Expect = 4.140e-64 Identity = 105/147 (71.43%), Postives = 122/147 (82.99%), Query Frame = 2
Query: 629 VLRFVTNNFKPYSESTIGASFMSKMIMIETTPIKFQIWDTAGQEKYHSLAPMYYRGAGAAIIVYDITNRQSFKTLKDWVGELQQQGPPDIVIAIAGNKRDLEADREVEVSTARAYAEEIGAMFFETSAKDDTNVYNVFVELSKHLPE 1069
VLRFVTN FKPYSESTIGASFM+KM++I++TPIK+QIWDTAGQEKYHSLAPMYYRGA AAI+VYDIT SF TLK+WV EL+Q GP DIVIAIAGNK DL REVE AR YA IGA++ ETSAK D+NV +FV+++ LP+
Sbjct: 1 VLRFVTNTFKPYSESTIGASFMAKMMIIDSTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRAASFATLKNWVRELKQLGPEDIVIAIAGNKSDLAPQREVEEEDAREYARSIGALYIETSAKTDSNVKQLFVDIAMRLPD 147 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5269.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5269.2.1 >prot_P-wetherbeei_contig5269.2.1 ID=prot_P-wetherbeei_contig5269.2.1|Name=mRNA_P-wetherbeei_contig5269.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=247bp MSLSTLIGHCESFKSGVLVPIARKAFSHDTAVVIFRILAVTIVRSSPRSPback to top mRNA from alignment at P-wetherbeei_contig5269:1928..3405+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5269.2.1 ID=mRNA_P-wetherbeei_contig5269.2.1|Name=mRNA_P-wetherbeei_contig5269.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1478bp|location=Sequence derived from alignment at P-wetherbeei_contig5269:1928..3405+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5269:1928..3405+ >mRNA_P-wetherbeei_contig5269.2.1 ID=mRNA_P-wetherbeei_contig5269.2.1|Name=mRNA_P-wetherbeei_contig5269.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig5269:1928..3405+ (Phaeothamnion wetherbeei SAG_119_79)back to top |