mRNA_P-wetherbeei_contig5261.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5261.2.1 vs. uniprot
Match: A0A4R7DNN7_9GAMM (Uncharacterized protein DUF4282 n=1 Tax=Idiomarina sp. H2 TaxID=2183987 RepID=A0A4R7DNN7_9GAMM) HSP 1 Score: 94.7 bits (234), Expect = 7.280e-24 Identity = 46/84 (54.76%), Postives = 61/84 (72.62%), Query Frame = 1
Query: 1 MRDLLYLDNMIVPKVITFFYWVLLLVAAVSGIGTMVAG-------GFITGLMVIAGGMFAARVWSELIVVLFKINEALQEIRKK 231
M+D+L+ +NM+ PK+ITF YW+LLL A + GI TM AG FI GL+ AGG AR+W EL++VLFK+NEALQ++RKK
Sbjct: 1 MKDVLFFNNMLTPKIITFVYWILLLAAVIGGISTMFAGYEGFTFGSFIMGLLAAAGGALGARIWCELLIVLFKMNEALQDLRKK 84
BLAST of mRNA_P-wetherbeei_contig5261.2.1 vs. uniprot
Match: A0A2W4S5R9_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4S5R9_9PROT) HSP 1 Score: 89.4 bits (220), Expect = 8.850e-22 Identity = 41/77 (53.25%), Postives = 58/77 (75.32%), Query Frame = 1
Query: 4 RDLLYLDNMIVPKVITFFYWVLLLVAAVSGIGTM-VAGGFITGLMVIAGGMFAARVWSELIVVLFKINEALQEIRKK 231
RD+ + DNM+ PKVITF YW++LL + ++GIG G F GLMV+ GG AR+W EL++VLFK+NEALQ++R++
Sbjct: 4 RDIFFFDNMVTPKVITFVYWLMLLGSVIAGIGVWRTLGSFTLGLMVLVGGAIGARIWCELLIVLFKMNEALQDLRRR 80
BLAST of mRNA_P-wetherbeei_contig5261.2.1 vs. uniprot
Match: UPI002003C291 (DUF4282 domain-containing protein n=1 Tax=Idiomarina sp. ATCH4 TaxID=2914829 RepID=UPI002003C291) HSP 1 Score: 89.4 bits (220), Expect = 9.880e-22 Identity = 43/84 (51.19%), Postives = 58/84 (69.05%), Query Frame = 1
Query: 1 MRDLLYLDNMIVPKVITFFYWVLLLVAAVSGIGTMVAG-------GFITGLMVIAGGMFAARVWSELIVVLFKINEALQEIRKK 231
M+D L+ +NM+ PK+ITF YW+LLL A + GIGTM AG F+ G+ G AR+W EL++VLFK+NEALQ++RKK
Sbjct: 1 MKDALFFNNMLTPKIITFVYWILLLAAVIGGIGTMFAGFEGFTFSSFLIGIFYAVAGAVGARIWCELLIVLFKMNEALQDLRKK 84
BLAST of mRNA_P-wetherbeei_contig5261.2.1 vs. uniprot
Match: UPI0004ABDA77 (DUF4282 domain-containing protein n=1 Tax=Desulfonatronum thiodismutans TaxID=159290 RepID=UPI0004ABDA77) HSP 1 Score: 88.6 bits (218), Expect = 1.990e-21 Identity = 45/84 (53.57%), Postives = 59/84 (70.24%), Query Frame = 1
Query: 1 MRDLLYLDNMIVPKVITFFYWVLLLVAAVSGIGTM-------VAGGFITGLMVIAGGMFAARVWSELIVVLFKINEALQEIRKK 231
M D+LY D M+ PK+IT YW+LL VA SG+G+M AG F+ GL+ GG AAR+W EL++VLFK+NEALQE+R+K
Sbjct: 1 MYDVLYFDKMLTPKIITLVYWLLLFVAVFSGLGSMFGGHEGFTAGKFLMGLVYAVGGAIAARIWCELMIVLFKMNEALQELRQK 84
BLAST of mRNA_P-wetherbeei_contig5261.2.1 vs. uniprot
Match: A0A7W2NJC8_9GAMM (DUF4282 domain-containing protein n=2 Tax=unclassified Colwellia TaxID=196834 RepID=A0A7W2NJC8_9GAMM) HSP 1 Score: 88.2 bits (217), Expect = 3.070e-21 Identity = 45/84 (53.57%), Postives = 61/84 (72.62%), Query Frame = 1
Query: 1 MRDLLYLDNMIVPKVITFFYWVLLLVAAVSGIGTMVAG-------GFITGLMVIAGGMFAARVWSELIVVLFKINEALQEIRKK 231
M+D+ + ++M+ PK+ITF YW+LLLVAAVSGI TM++G FI+GL + GG AAR+W EL++VLFKIN LQ+I K
Sbjct: 1 MKDVFFFESMLTPKIITFVYWLLLLVAAVSGISTMLSGYGGFTFATFISGLFIAGGGAIAARIWCELMIVLFKINSNLQKISDK 84
BLAST of mRNA_P-wetherbeei_contig5261.2.1 vs. uniprot
Match: A0A7Y4ZXM4_9PROT (DUF4282 domain-containing protein n=1 Tax=Methylotenera sp. TaxID=2051956 RepID=A0A7Y4ZXM4_9PROT) HSP 1 Score: 87.0 bits (214), Expect = 8.090e-21 Identity = 42/84 (50.00%), Postives = 59/84 (70.24%), Query Frame = 1
Query: 1 MRDLLYLDNMIVPKVITFFYWVLLLVAAVSGIGTMVAG-------GFITGLMVIAGGMFAARVWSELIVVLFKINEALQEIRKK 231
M+D+L+ D+M+ PK+ITF YW+LL A ++G+ TM G F TGL+ GG AAR+W EL++VLFK+NEALQ++R K
Sbjct: 1 MKDVLFFDSMLTPKIITFVYWLLLFAAVMAGLSTMFGGYGGFSIGNFFTGLLYSVGGAVAARIWCELLIVLFKMNEALQDLRHK 84
BLAST of mRNA_P-wetherbeei_contig5261.2.1 vs. uniprot
Match: F5J4D7_9GAMM (DUF4282 domain-containing protein n=6 Tax=Pseudoalteromonas TaxID=53246 RepID=F5J4D7_9GAMM) HSP 1 Score: 86.7 bits (213), Expect = 1.090e-20 Identity = 41/80 (51.25%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 1 MRDLLYLDNMIVPKVITFFYWVLLLVAAVSGIGTMVA---GGFITGLMVIAGGMFAARVWSELIVVLFKINEALQEIRKK 231
M+D+ + D+M+ PK+ITF YW++L+ +SG+ TM A GGFI+GL +I GG AR+W EL++VLFKI+E LQ+I K
Sbjct: 1 MKDIFFFDSMLTPKIITFVYWLILIGTLISGVTTMFAKYGGGFISGLAIIVGGAIGARIWCELLIVLFKIHENLQKIANK 80
BLAST of mRNA_P-wetherbeei_contig5261.2.1 vs. uniprot
Match: A0A3A6UM67_9GAMM (DUF4282 domain-containing protein n=1 Tax=Parashewanella spongiae TaxID=342950 RepID=A0A3A6UM67_9GAMM) HSP 1 Score: 85.1 bits (209), Expect = 4.420e-20 Identity = 41/80 (51.25%), Postives = 61/80 (76.25%), Query Frame = 1
Query: 1 MRDLLYLDNMIVPKVITFFYWVLLLVAAVSGIGTMVA---GGFITGLMVIAGGMFAARVWSELIVVLFKINEALQEIRKK 231
MRD+L+ D+M+ PK+ITF YW++L+ + +SG+ TM + GGFI+GL +I G+ AR+W EL++VLFKI+E LQ+I K
Sbjct: 1 MRDILFFDSMLTPKIITFVYWIMLIGSVISGLTTMFSSFGGGFISGLGIIIFGVIGARIWCELLIVLFKIHENLQKIADK 80
BLAST of mRNA_P-wetherbeei_contig5261.2.1 vs. uniprot
Match: Q5QW76_IDILO (Uncharacterized conserved membrane protein n=3 Tax=Idiomarinaceae TaxID=267893 RepID=Q5QW76_IDILO) HSP 1 Score: 84.7 bits (208), Expect = 6.630e-20 Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 1
Query: 1 MRDLLYLDNMIVPKVITFFYWVLLLVAAVSGIGTMVAG-------GFITGLMVIAGGMFAARVWSELIVVLFKINEALQEIRKK 231
M+D+L+ +NM+ PK+ITF YW+LLL A V G+ TM G F+ G+ G AR+W EL++VLFK+NEALQ++RKK
Sbjct: 1 MKDVLFFNNMLTPKIITFVYWILLLAAVVGGVSTMFMGYEGFTFGNFLKGIFYALAGGVGARIWCELLIVLFKMNEALQDLRKK 84
BLAST of mRNA_P-wetherbeei_contig5261.2.1 vs. uniprot
Match: A0A7V7X0A0_9BURK (DUF4282 domain-containing protein n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A7V7X0A0_9BURK) HSP 1 Score: 84.7 bits (208), Expect = 6.630e-20 Identity = 43/83 (51.81%), Postives = 57/83 (68.67%), Query Frame = 1
Query: 1 MRDLLYLDNMIVPKVITFFYWVLLLVAAVSGIGTMVA------GGFITGLMVIAGGMFAARVWSELIVVLFKINEALQEIRKK 231
MR LL+ D M+ P++ITF YW+LL VAAV GIG M + GF TGL +I GG AR+W EL++VLFKINE Q++ ++
Sbjct: 1 MRSLLFFDAMVTPRIITFVYWLLLFVAAVGGIGAMFSFGRMSFSGFATGLAIIVGGALGARIWCELLMVLFKINEHTQKMAER 83 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5261.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5261.2.1 >prot_P-wetherbeei_contig5261.2.1 ID=prot_P-wetherbeei_contig5261.2.1|Name=mRNA_P-wetherbeei_contig5261.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=78bp MRDLLYLDNMIVPKVITFFYWVLLLVAAVSGIGTMVAGGFITGLMVIAGGback to top mRNA from alignment at P-wetherbeei_contig5261:792..1025+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5261.2.1 ID=mRNA_P-wetherbeei_contig5261.2.1|Name=mRNA_P-wetherbeei_contig5261.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=234bp|location=Sequence derived from alignment at P-wetherbeei_contig5261:792..1025+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5261:792..1025+ >mRNA_P-wetherbeei_contig5261.2.1 ID=mRNA_P-wetherbeei_contig5261.2.1|Name=mRNA_P-wetherbeei_contig5261.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=234bp|location=Sequence derived from alignment at P-wetherbeei_contig5261:792..1025+ (Phaeothamnion wetherbeei SAG_119_79)back to top |