mRNA_P-wetherbeei_contig52584.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52584.1.1 vs. uniprot
Match: A0A6L6AL59_9ACTN (Uncharacterized protein n=6 Tax=root TaxID=1 RepID=A0A6L6AL59_9ACTN) HSP 1 Score: 248 bits (633), Expect = 7.540e-83 Identity = 133/139 (95.68%), Postives = 137/139 (98.56%), Query Frame = 1
Query: 1 MRTTLRRLGVVSAAXXXXXXXXXXXXSAHHCYVPMYSLSAPASSNWFVLSAETGADLIFGYQAACDEAADAGYDALRAERMPVGIKIFEKMTIGDPKGTERIPTPNGADGKGLEYFGAGSTLADEMVETWIAGADAHDC 417
MRTT+RRLGVVSAAXXXXXXXXXXXXSAHHCYVPMYSLSAPASSNWFV+SAETGADLIFGYQAACDEAADAGYDALRAE MPVGIKIFEKMTIGDPKGTERIPTPNGA+GKGLEYFGAGSTLADEMVE WIAGADA+DC
Sbjct: 1 MRTTIRRLGVVSAAXXXXXXXXXXXXSAHHCYVPMYSLSAPASSNWFVISAETGADLIFGYQAACDEAADAGYDALRAEGMPVGIKIFEKMTIGDPKGTERIPTPNGANGKGLEYFGAGSTLADEMVEAWIAGADAYDC 139
BLAST of mRNA_P-wetherbeei_contig52584.1.1 vs. uniprot
Match: UPI00131ED269 (hypothetical protein n=1 Tax=Nocardioides sediminis TaxID=433648 RepID=UPI00131ED269) HSP 1 Score: 206 bits (523), Expect = 4.400e-66 Identity = 111/139 (79.86%), Postives = 122/139 (87.77%), Query Frame = 1
Query: 1 MRTTLRRLGVVSAAXXXXXXXXXXXXSAHHCYVPMYSLSAPASSNWFVLSAETGADLIFGYQAACDEAADAGYDALRAERMPVGIKIFEKMTIGDPKGTERIPTPNGADGKGLEYFGAGSTLADEMVETWIAGADAHDC 417
M T+RRLGVV+AAXXXXXXXXXXX SAHHC+VPMYSL+ P S+NWFV+SAE GA LI GY A CDEAADAGY AL A R+PVGIKIFEKMTIGDPKGTER+P+P+GADGKGLEYF AGSTL DEMV TWIAGA AH+C
Sbjct: 1 MSATMRRLGVVTAAXXXXXXXXXXXASAHHCFVPMYSLNGPTSANWFVVSAEDGAALIEGYTAECDEAADAGYAALEAARLPVGIKIFEKMTIGDPKGTERMPSPHGADGKGLEYFMAGSTLPDEMVGTWIAGATAHEC 139
BLAST of mRNA_P-wetherbeei_contig52584.1.1 vs. uniprot
Match: A0A0Q9TBD7_9ACTN (Uncharacterized protein n=2 Tax=Nocardioides sp. Soil805 TaxID=1736416 RepID=A0A0Q9TBD7_9ACTN) HSP 1 Score: 199 bits (506), Expect = 1.500e-63 Identity = 101/135 (74.81%), Postives = 114/135 (84.44%), Query Frame = 1
Query: 13 LRRLGVVSAAXXXXXXXXXXXXSAHHCYVPMYSLSAPASSNWFVLSAETGADLIFGYQAACDEAADAGYDALRAERMPVGIKIFEKMTIGDPKGTERIPTPNGADGKGLEYFGAGSTLADEMVETWIAGADAHDC 417
+RRLGVV+AAXXXXXXX SAHHC+VPMYSL P+S+NWFV+SAE GA L+ GY+A CDEA DAGYDA+RA +PVGIKIFEKMTIGDPKGT RIP PNGADG+GLEYFGAGSTL DEMV TWI GA ++ C
Sbjct: 1 MRRLGVVTAAXXXXXXXTATGASAHHCFVPMYSLGGPSSANWFVISAEDGAFLVAGYEAGCDEAVDAGYDAVRAAGLPVGIKIFEKMTIGDPKGTGRIPNPNGADGRGLEYFGAGSTLPDEMVGTWIDGASSYTC 135
BLAST of mRNA_P-wetherbeei_contig52584.1.1 vs. uniprot
Match: UPI000D694CA3 (hypothetical protein n=1 Tax=Ornithinimicrobium cavernae TaxID=2666047 RepID=UPI000D694CA3) HSP 1 Score: 179 bits (454), Expect = 1.610e-55 Identity = 88/139 (63.31%), Postives = 100/139 (71.94%), Query Frame = 1
Query: 4 RTTLRRLGVVSA-AXXXXXXXXXXXXSAHHCYVPMYSLSAPASSNWFVLSAETGADLIFGYQAACDEAADAGYDALRAERMPVGIKIFEKMTIGDPKGTERIPTPNGADGKGLEYFGAGSTLADEMVETWIAGADAHDC 417
R+T+ R GVV A AHHCYVPMYSL+ P S+NW V +AE GA L FG+ A CDE DAGYDALRAE +PVGIKI KMTIGDPKG ERIP PNGA+GKGLEYFGAGSTLAD+M+ TW+ A+ DC
Sbjct: 3 RSTIVRRGVVGGVAAFAAVALAAGPALAHHCYVPMYSLNGPTSANWEVYTAEDGAALFFGFMAECDEQVDAGYDALRAEGLPVGIKINAKMTIGDPKGEERIPNPNGANGKGLEYFGAGSTLADQMIVTWVGAAEEVDC 141
BLAST of mRNA_P-wetherbeei_contig52584.1.1 vs. uniprot
Match: A0A8H9KTM7_9MICO (Uncharacterized protein n=1 Tax=Knoellia flava TaxID=913969 RepID=A0A8H9KTM7_9MICO) HSP 1 Score: 169 bits (428), Expect = 1.410e-51 Identity = 88/139 (63.31%), Postives = 101/139 (72.66%), Query Frame = 1
Query: 4 RTTLRRLGVVSAAXXXXXXXXXXXXSAHHCYVPMYSLS-APASSNWFVLSAETGADLIFGYQAACDEAADAGYDALRAERMPVGIKIFEKMTIGDPKGTERIPTPNGADGKGLEYFGAGSTLADEMVETWIAGADAHDC 417
RTTLRR G+ AA AHHC+VPMYSL AP+S+NWFV+SA GA GY+ ACD A DAGYDALRA +PVGIKIFEKMTIGDPK T R+ PNGA+GKGLEYFGAGS L +MVET+I GA++ DC
Sbjct: 3 RTTLRRAGLAIAATGTAAVLAAAPAMAHHCFVPMYSLDGAPSSANWFVMSAADGAMFEAGYEPACDAAVDAGYDALRAAGLPVGIKIFEKMTIGDPKHTGRM-NPNGANGKGLEYFGAGSELPFQMVETFIEGAESADC 140
BLAST of mRNA_P-wetherbeei_contig52584.1.1 vs. uniprot
Match: R7XVX5_9ACTN (Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 TaxID=110319 RepID=R7XVX5_9ACTN) HSP 1 Score: 166 bits (419), Expect = 3.290e-50 Identity = 80/139 (57.55%), Postives = 100/139 (71.94%), Query Frame = 1
Query: 7 TTLRRLGVVSAAXXXXXXXXXXXXSAHHCYVPMYSLSAPASSNWFVLSAETGA--DLIFGYQAACDEAADAGYDALRAERMPVGIKIFEKMTIGDPKGTERIPTPNGADGKGLEYFGAGSTLADEMVETWIAGADAHDC 417
T++RR +++ SAHHC+VPMYSL+ P S NWFVLSA+ A I G++AAC EAA+AGY ALRA +PVG+K+F KMTIGDPKG ERIP+ NGADGKGLEYFGAGST+ +M++TWI A A+ C
Sbjct: 4 TSIRRAAMIAVGTTAAIALGAGSASAHHCFVPMYSLNGPVSDNWFVLSAQDAAADPDIAGFEAACPEAAEAGYAALRAADLPVGLKLFGKMTIGDPKGEERIPSNNGADGKGLEYFGAGSTVPFQMLDTWIGAAAAYTC 142
BLAST of mRNA_P-wetherbeei_contig52584.1.1 vs. uniprot
Match: A0A4V1XYT1_9ACTN (Uncharacterized protein n=1 Tax=Nocardioides guangzhouensis TaxID=2497878 RepID=A0A4V1XYT1_9ACTN) HSP 1 Score: 166 bits (419), Expect = 3.290e-50 Identity = 81/112 (72.32%), Postives = 90/112 (80.36%), Query Frame = 1
Query: 82 AHHCYVPMYSLSAPASSNWFVLSAETGADLIFGYQAACDEAADAGYDALRAERMPVGIKIFEKMTIGDPKGTERIPTPNGADGKGLEYFGAGSTLADEMVETWIAGADAHDC 417
AHHCY+PMYSL+ PAS+NWFV+SA+ GA LI YQA C AADAGY ALR MPVGIKI E TIGDPK ++ PNGA+GKGLEYFGAGSTLADEMV TWIAGA A+DC
Sbjct: 30 AHHCYIPMYSLNGPASANWFVVSAQDGAALIADYQAECAGAADAGYAALRDAGMPVGIKIKESKTIGDPKDEGKM-NPNGANGKGLEYFGAGSTLADEMVSTWIAGASAYDC 140
BLAST of mRNA_P-wetherbeei_contig52584.1.1 vs. uniprot
Match: A0A0Q9KMK6_9MICO (Uncharacterized protein n=1 Tax=Knoellia sp. Soil729 TaxID=1736394 RepID=A0A0Q9KMK6_9MICO) HSP 1 Score: 164 bits (416), Expect = 8.840e-50 Identity = 83/139 (59.71%), Postives = 95/139 (68.35%), Query Frame = 1
Query: 1 MRTTLRRLGVVSAAXXXXXXXXXXXXSAHHCYVPMYSLSAPASSNWFVLSAETGADLIFGYQAACDEAADAGYDALRAERMPVGIKIFEKMTIGDPKGTERIPTPNGADGKGLEYFGAGSTLADEMVETWIAGADAHDC 417
M T LRR + A AHHC++PMYSL+ P SSNWFV+SAE GADL GYQA+CD A DAGY ALRA +PVGIKIFE MTIGDPK T R PNGA+ KGLEYFGAGS L M+ TW+ GA++ DC
Sbjct: 3 MSTRLRRPLLAVAGATTALLVAAPAALAHHCFIPMYSLNGPTSSNWFVVSAEQGADLEMGYQASCDAAVDAGYAALRAAGLPVGIKIFEHMTIGDPKETGRT-NPNGANNKGLEYFGAGSELPFTMINTWVEGAESVDC 140
BLAST of mRNA_P-wetherbeei_contig52584.1.1 vs. uniprot
Match: A0A4Q2S386_9ACTN (Uncharacterized protein n=1 Tax=Nocardioides glacieisoli TaxID=1168730 RepID=A0A4Q2S386_9ACTN) HSP 1 Score: 164 bits (414), Expect = 1.670e-49 Identity = 97/137 (70.80%), Postives = 108/137 (78.83%), Query Frame = 1
Query: 7 TTLRRLGVVSAAXXXXXXXXXXXXSAHHCYVPMYSLSAPASSNWFVLSAETGADLIFGYQAACDEAADAGYDALRAERMPVGIKIFEKMTIGDPKGTERIPTPNGADGKGLEYFGAGSTLADEMVETWIAGADAHDC 417
TTLRRLGVV+AAXXXXXXXXXX SAHHC+VPMYSL PASSNWFVL+A GA GY A C A +AGY ALRA +PVG+KIFEKMTIGDPK T R+ PNGA+G GLEYF A S L +MVET++AGA AHDC
Sbjct: 4 TTLRRLGVVTAAXXXXXXXXXXSASAHHCFVPMYSLGGPASSNWFVLTAADGAGFE-GYTAECAGANEAGYAALRAAGLPVGLKIFEKMTIGDPKHTGRM-NPNGANGVGLEYFEAFSPLPGQMVETYVAGASAHDC 138
BLAST of mRNA_P-wetherbeei_contig52584.1.1 vs. uniprot
Match: UPI001554DD9E (hypothetical protein n=1 Tax=Nocardioides sp. zg-1230 TaxID=2736601 RepID=UPI001554DD9E) HSP 1 Score: 161 bits (408), Expect = 1.370e-48 Identity = 82/137 (59.85%), Postives = 96/137 (70.07%), Query Frame = 1
Query: 7 TTLRRLGVVSAAXXXXXXXXXXXXSAHHCYVPMYSLSAPASSNWFVLSAETGADLIFGYQAACDEAADAGYDALRAERMPVGIKIFEKMTIGDPKGTERIPTPNGADGKGLEYFGAGSTLADEMVETWIAGADAHDC 417
TT+RRLGVV+A SAHHC++PM +L P SSNWFV+SAE GA+ GY A CD A DAGY ALR +PV +K+FEKMTIGDPK T R PNGADGKGLEYF GS L +MVET++AGADA+ C
Sbjct: 4 TTVRRLGVVTAGAAAAIAVTAASASAHHCFIPMNTLDGPTSSNWFVISAEMGAEFE-GYTADCDGARDAGYAALREAGLPVALKVFEKMTIGDPKHTGRT-NPNGADGKGLEYFAEGSPLPMQMVETYVAGADAYSC 138 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52584.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52584.1.1 >prot_P-wetherbeei_contig52584.1.1 ID=prot_P-wetherbeei_contig52584.1.1|Name=mRNA_P-wetherbeei_contig52584.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=140bp MRTTLRRLGVVSAAAAAAVAVTATSASAHHCYVPMYSLSAPASSNWFVLSback to top mRNA from alignment at P-wetherbeei_contig52584:57..476+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52584.1.1 ID=mRNA_P-wetherbeei_contig52584.1.1|Name=mRNA_P-wetherbeei_contig52584.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=420bp|location=Sequence derived from alignment at P-wetherbeei_contig52584:57..476+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52584:57..476+ >mRNA_P-wetherbeei_contig52584.1.1 ID=mRNA_P-wetherbeei_contig52584.1.1|Name=mRNA_P-wetherbeei_contig52584.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=420bp|location=Sequence derived from alignment at P-wetherbeei_contig52584:57..476+ (Phaeothamnion wetherbeei SAG_119_79)back to top |