mRNA_P-wetherbeei_contig52546.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig52546.1.1
Unique NamemRNA_P-wetherbeei_contig52546.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig52546.1.1 vs. uniprot
Match: A0A6N7GSL7_9HYPH (Amidohydrolase family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GSL7_9HYPH)

HSP 1 Score: 271 bits (694), Expect = 1.460e-88
Identity = 122/181 (67.40%), Postives = 142/181 (78.45%), Query Frame = 1
Query:    1 KACSDLGLYVFIHPLAKVINWNRMDADDLGRMFGWEFSLIIATIRLINSGLLDELPELKVHFSHFSGGIGRYRGRYNGFQQRTKWGTSQIKGHNRQPKLGVDHYLNNRLYYDCAGWAGPDPCGPLGADWVKFGLQELALSQCVFATDYPQAIRDPGEVLDYVKAVEVLDPNAKALVHGLNA 543
            +  +DLGLYVFIHPL  VI W  M ADDLGRM GW+FSL++A +R+INSGLLDELP L V FSHF+ G+GRY GR  GFQQR KWGT+ + GH R+PK   DHYL NRL+YDCAGWAGPD     GA+WV+FGLQE+ALSQ VFATDYPQA+RDP EV +YV AV  L  NA+A+V GLNA
Sbjct:  143 RTAADLGLYVFIHPLPNVIRWEHMYADDLGRMLGWQFSLMVAAVRMINSGLLDELPTLNVQFSHFAAGLGRYLGRIRGFQQRDKWGTAAVPGHGRRPKRSFDHYLENRLFYDCAGWAGPDHAADWGAEWVRFGLQEVALSQIVFATDYPQAVRDPQEVAEYVAAVRALGSNARAMVDGLNA 323          
BLAST of mRNA_P-wetherbeei_contig52546.1.1 vs. uniprot
Match: A0A6L5FR71_9HYPH (Amidohydrolase family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FR71_9HYPH)

HSP 1 Score: 269 bits (687), Expect = 2.020e-87
Identity = 122/181 (67.40%), Postives = 143/181 (79.01%), Query Frame = 1
Query:    1 KACSDLGLYVFIHPLAKVINWNRMDADDLGRMFGWEFSLIIATIRLINSGLLDELPELKVHFSHFSGGIGRYRGRYNGFQQRTKWGTSQIKGHNRQPKLGVDHYLNNRLYYDCAGWAGPDPCGPLGADWVKFGLQELALSQCVFATDYPQAIRDPGEVLDYVKAVEVLDPNAKALVHGLNA 543
            KA +DLGLYVFIHPLA VI W  MDADDLGRM GWEFSL+ A +RLIN G+LDELP LK+ FSHF+ GIGRYRGR  GFQQR KWGT+++  H R+P    D+YL+ RL+YDCAGWAGPD     GA+WV+FGL E+ LSQ VFATDYPQA+RD GEV  YVKAV  L PNA+A+++G NA
Sbjct:  143 KAAADLGLYVFIHPLAGVIRWQHMDADDLGRMLGWEFSLMTAAVRLINGGVLDELPTLKIQFSHFAAGIGRYRGRLRGFQQRDKWGTAKVPRHGRRPPKPFDYYLDERLFYDCAGWAGPDHAAEWGAEWVRFGLDEVPLSQLVFATDYPQAVRDAGEVAGYVKAVRDLGPNARAMLNGTNA 323          
BLAST of mRNA_P-wetherbeei_contig52546.1.1 vs. uniprot
Match: A0A537NNX0_9PROT (Amidohydrolase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NNX0_9PROT)

HSP 1 Score: 229 bits (585), Expect = 4.820e-72
Identity = 107/181 (59.12%), Postives = 133/181 (73.48%), Query Frame = 1
Query:    1 KACSDLGLYVFIHPLAKVINWNRMDADDLGRMFGWEFSLIIATIRLINSGLLDELPELKVHFSHFSGGIGRYRGRYNGFQQRTKWGTSQIKGHNRQPKLGVDHYLNNRLYYDCAGWAGPDPCGPLGADWVKFGLQELALSQCVFATDYPQAIRDPGEVLDYVKAVEVLDPNAKALVHGLNA 543
            K+C++L LYVF+HPL +VI W ++ ADDLGRM GWEFSL++AT+RLINSG LDEL  L++H SHF+GGIGRY  R  G Q R K  T+ I  H+RQP+L  DHYL +RL YDC GW+GPD  G  GADW + GL ELA +Q VFATDYPQA+ D  EV   + AV  L  +A+A+V GL+A
Sbjct:  144 KSCAELELYVFVHPLPRVIAWPQVYADDLGRMLGWEFSLMVATVRLINSGRLDELSTLRIHMSHFAGGIGRYLPRIRGLQDRRKSFTAGIPRHDRQPRLPFDHYLQHRLVYDCCGWSGPDDAGQRGADWARMGLAELAGAQIVFATDYPQAVHDDVEVAACISAVRALGSHAEAIVDGLDA 324          
BLAST of mRNA_P-wetherbeei_contig52546.1.1 vs. uniprot
Match: A0A1Q7BMM9_9PROT (Amidohydro-rel domain-containing protein n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BMM9_9PROT)

HSP 1 Score: 228 bits (582), Expect = 1.330e-71
Identity = 105/181 (58.01%), Postives = 132/181 (72.93%), Query Frame = 1
Query:    1 KACSDLGLYVFIHPLAKVINWNRMDADDLGRMFGWEFSLIIATIRLINSGLLDELPELKVHFSHFSGGIGRYRGRYNGFQQRTKWGTSQIKGHNRQPKLGVDHYLNNRLYYDCAGWAGPDPCGPLGADWVKFGLQELALSQCVFATDYPQAIRDPGEVLDYVKAVEVLDPNAKALVHGLNA 543
            KA ++LGLYVF+HPL +VI+WN MDADDLGRM GWEFSL++AT+R+INSGLLDELP LK+ FSHF+GG+ RY  R  G QQR K GT+ I  H RQP+   ++YL +RL+YDCAGW+G       G +WV+ GL EL  +Q VFATDYPQ + D  +V  YV AV  L   A+A++ G NA
Sbjct:  143 KAAANLGLYVFVHPLPRVISWNAMDADDLGRMLGWEFSLMVATVRIINSGLLDELPTLKLQFSHFAGGLARYLPRIRGLQQREKAGTALIPRHGRQPREAFEYYLRHRLFYDCAGWSGRGHAAEYGREWVRIGLAELPAAQTVFATDYPQGVDDDDDVAAYVAAVRALGSEAQAVLDGDNA 323          
BLAST of mRNA_P-wetherbeei_contig52546.1.1 vs. uniprot
Match: A0A2D6G4C5_9PROT (Amidohydro-rel domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6G4C5_9PROT)

HSP 1 Score: 171 bits (433), Expect = 2.890e-49
Identity = 79/180 (43.89%), Postives = 109/180 (60.56%), Query Frame = 1
Query:    7 CSDLGLYVFIHPLAKVINWNRMDADDLGRMFGWEFSLIIATIRLINSGLLDELPELKVHFSHFSGGIGRYRGRYNGF-QQRTKWGTSQIKGHNRQPKLGVDHYLNNRLYYDCAGWAGPDPCGPLGADWVKFGLQELALSQCVFATDYPQAIRDPGEVLDYVKAVEVLDPNAKALVHGLNA 543
            C   GLYVF+HP+   I W RMD DDL R  G EFSLI+A I+LI SG+LD  P+L V F H +GG+G Y GR+  + + +  WGT+    H R+P+    HY+ NRL +D  GW+GP         W++ GL ++   + VFATDYPQA+R   E++DYV  V+ L  +   ++   NA
Sbjct:  145 CQRRGLYVFVHPINHAITWERMDTDDLHRCVGREFSLIVACIKLICSGVLDRYPDLMVQFGHLAGGVGWYVGRFRSYLEDKEFWGTADHPIHGRKPEHDFMHYIENRLMFDTGGWSGPIDTARYAVQWIERGLMDIPAERMVFATDYPQAVRTDQEIVDYVAGVKALGADGAKILSTQNA 324          
BLAST of mRNA_P-wetherbeei_contig52546.1.1 vs. uniprot
Match: A0A1Q7BF14_9PROT (Amidohydro-rel domain-containing protein n=7 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7BF14_9PROT)

HSP 1 Score: 151 bits (382), Expect = 1.040e-41
Identity = 75/176 (42.61%), Postives = 107/176 (60.80%), Query Frame = 1
Query:    7 CSDLGLYVFIHPLAKVINWNRMDADDLGRMFGWEFSLIIATIRLINSGLLDELPELKVHFSHFSGGIGRYRGRYNGFQQRTKWGTSQIKGHNRQPKLGVDHYLNNRLYYDCAGWAGPDPCGPLGADWVKFGLQELALSQCVFATDYPQAIRDPGEVLDYVKAVEVLDPNAKALVHG 534
            C+ LGL+VF+HP  K+    + D  D+ R  G EFSL++ATIRLINSG+ D  P L VH SH  GG+    GR   +Q +  WGT+    H R+P+   D+YL + + +D AG+     CG +GA  V+  L E+  S+ VFATDYPQ IR+ G V D+V+ +  L  + +A++ G
Sbjct:  145 CARLGLFVFVHPALKLNQTQQFDGYDMARSVGREFSLVMATIRLINSGVFDRHPALTVHMSHLGGGLAALLGRIRSYQDKEFWGTADNARHGRKPERDFDYYLQHNMVFDTAGF-----CGAMGA--VRGALIEIPASRIVFATDYPQEIRERGAVRDFVRELRALGKDGEAILSG 313          
BLAST of mRNA_P-wetherbeei_contig52546.1.1 vs. uniprot
Match: A0A524HY40_9HYPH (Amidohydrolase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A524HY40_9HYPH)

HSP 1 Score: 138 bits (348), Expect = 1.230e-36
Identity = 77/172 (44.77%), Postives = 100/172 (58.14%), Query Frame = 1
Query:   19 GLYVFIHPLAKVINWNRMDADDLGRMFGWEFSLIIATIRLINSGLLDELPELKVHFSHFSGGIGRYRGRYNGFQQRTKWGTSQIKGHNRQPKLGVDHYLNNRLYYDCAGWAGPDPCGPLGADWVKFGLQELALSQCVFATDYPQAIRDPGEVLDYVKAVEVLDPNAKALVHG 534
            GLYVF+HP  K+    + +A D  R  G EFSLI+ATIRLINSG+LD  P L +  +H SGGI    GR  GFQ +  WGT+    H   P+    +YLN RL +D AG+     CG +G+  VK  L EL  S+ VFATDYPQ IR    V  +V  +  L  + +A++ G
Sbjct:  149 GLYVFVHPALKLNFPEQFNAFDTARAVGREFSLIMATIRLINSGVLDRHPNLTIQMAHLSGGIASMLGRVRGFQDKEFWGTAGNARHGAIPEKDFSYYLNERLVFDTAGF-----CGQVGS--VKTALVELPASRIVFATDYPQEIRTREPVKKFVDDIRALGADGEAILGG 313          
BLAST of mRNA_P-wetherbeei_contig52546.1.1 vs. uniprot
Match: A0A6L5FFZ6_9HYPH (Amidohydrolase family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FFZ6_9HYPH)

HSP 1 Score: 135 bits (341), Expect = 1.260e-35
Identity = 73/175 (41.71%), Postives = 99/175 (56.57%), Query Frame = 1
Query:   10 SDLGLYVFIHPLAKVINWNRMDADDLGRMFGWEFSLIIATIRLINSGLLDELPELKVHFSHFSGGIGRYRGRYNGFQQRTKWGTSQIKGHNRQPKLGVDHYLNNRLYYDCAGWAGPDPCGPLGADWVKFGLQELALSQCVFATDYPQAIRDPGEVLDYVKAVEVLDPNAKALVHG 534
            + LGL+VF+HP  K+    + DA D  R  G EFSL++A IRLI+SG+ D  P LKVH SH  GGI    GR   +Q +T WGT     H   PK   D Y+ + + +D AG+     CG + A  VK  L E+  ++ VFATDYPQ IR    V D+V+ +  L  +  A++ G
Sbjct:  146 ARLGLFVFVHPALKLTYPQQFDAYDTARSVGREFSLVMAMIRLISSGVFDRHPTLKVHMSHLGGGISSIIGRIRSYQDKTFWGTKGNAKHGMLPKRPFDDYIRDNIIFDTAGF-----CGAIRA--VKSALLEIPAARIVFATDYPQEIRARSAVRDFVQDIRKLGADGAAILEG 313          
BLAST of mRNA_P-wetherbeei_contig52546.1.1 vs. uniprot
Match: A0A6N7H1R6_9HYPH (Amidohydrolase family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7H1R6_9HYPH)

HSP 1 Score: 135 bits (339), Expect = 2.820e-35
Identity = 71/175 (40.57%), Postives = 97/175 (55.43%), Query Frame = 1
Query:   10 SDLGLYVFIHPLAKVINWNRMDADDLGRMFGWEFSLIIATIRLINSGLLDELPELKVHFSHFSGGIGRYRGRYNGFQQRTKWGTSQIKGHNRQPKLGVDHYLNNRLYYDCAGWAGPDPCGPLGADWVKFGLQELALSQCVFATDYPQAIRDPGEVLDYVKAVEVLDPNAKALVHG 534
            + LG++VF+HP  K+    + DA D  R  G EFSLI+ATIRL+NSG+ D  P L VH +H SGG+    GR   +Q +  WGT     H        D+Y+NN L +D AG+AG           VK  + E+  S+ VFATDYPQ IR    V D+V  +  L  + +A++ G
Sbjct:  154 AKLGVFVFVHPALKLNYSQQFDAFDTARSVGREFSLIMATIRLVNSGVFDRHPNLTVHMAHLSGGMASMLGRIRSYQDKDFWGTKGNPRHGAGSAKDFDYYINNNLVFDTAGFAG-------AISSVKTSMVEIPPSRIVFATDYPQEIRSREAVRDFVGEIRALGKDGEAILSG 321          
BLAST of mRNA_P-wetherbeei_contig52546.1.1 vs. uniprot
Match: A0A6N7FGF4_9PROT (Amidohydrolase family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FGF4_9PROT)

HSP 1 Score: 136 bits (343), Expect = 3.210e-35
Identity = 69/178 (38.76%), Postives = 99/178 (55.62%), Query Frame = 1
Query:    1 KACSDLGLYVFIHPLAKVINWNRMDADDLGRMFGWEFSLIIATIRLINSGLLDELPELKVHFSHFSGGIGRYRGRYNGFQQRTKWGTSQIKGHNRQPKLGVDHYLNNRLYYDCAGWAGPDPCGPLGADWVKFGLQELALSQCVFATDYPQAIRDPGEVLDYVKAVEVLDPNAKALVHG 534
            + C   GLYVF+HP  K+ +    DA D+ R  G EFS+ ++ IRLIN G+LD  P L V  +H  GGI    GR   +Q +  WGT+    H   P+  +DHY++ RL +D AG+     CG + +  +   L EL   + VFATDYPQ IR+   V  +V  +  L P+ +A++ G
Sbjct:  230 EECQRRGLYVFVHPALKLDHPEPYDAYDMARSIGREFSMALSVIRLINGGVLDRFPALNVQIAHLGGGIASVLGRVRSYQDKAFWGTTGNARHGALPEKPLDHYIDERLVFDTAGF-----CGAISS--INSSLVELPARRVVFATDYPQEIRERSAVKKFVDGLRALGPDGEAILGG 400          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52546.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6N7GSL7_9HYPH1.460e-8867.40Amidohydrolase family protein n=1 Tax=Hyphomicrobi... [more]
A0A6L5FR71_9HYPH2.020e-8767.40Amidohydrolase family protein n=1 Tax=Hyphomicrobi... [more]
A0A537NNX0_9PROT4.820e-7259.12Amidohydrolase n=1 Tax=Alphaproteobacteria bacteri... [more]
A0A1Q7BMM9_9PROT1.330e-7158.01Amidohydro-rel domain-containing protein n=1 Tax=A... [more]
A0A2D6G4C5_9PROT2.890e-4943.89Amidohydro-rel domain-containing protein n=1 Tax=R... [more]
A0A1Q7BF14_9PROT1.040e-4142.61Amidohydro-rel domain-containing protein n=7 Tax=u... [more]
A0A524HY40_9HYPH1.230e-3644.77Amidohydrolase n=1 Tax=Hyphomicrobiales bacterium ... [more]
A0A6L5FFZ6_9HYPH1.260e-3541.71Amidohydrolase family protein n=1 Tax=Hyphomicrobi... [more]
A0A6N7H1R6_9HYPH2.820e-3540.57Amidohydrolase family protein n=1 Tax=Hyphomicrobi... [more]
A0A6N7FGF4_9PROT3.210e-3538.76Amidohydrolase family protein n=1 Tax=Alphaproteob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52546contigP-wetherbeei_contig52546:3..545 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1120936.KB907221_gene2112
PFAMsAmidohydro_2
Model size543
Max annot lvl201174|Actinobacteria
KEGG rclassRC00779
KEGG koko:K03392
KEGG ReactionR04323
KEGG Pathwayko00380,ko01100,map00380,map01100
KEGG ModuleM00038
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.44e-14
EggNOG OGsCOG2159@1|root,COG2159@2|Bacteria,2GN9D@201174|Actinobacteria
EC4.1.1.45
DescriptionAmidohydrolase
Cds size543
COG categoryS
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186787.1620188-CDS-P-wetherbeei_contig52546:2..5451683186787.1620188-CDS-P-wetherbeei_contig52546:2..545Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig52546 3..545 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52546.1.1prot_P-wetherbeei_contig52546.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig52546 3..545 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig52546.1.1

>prot_P-wetherbeei_contig52546.1.1 ID=prot_P-wetherbeei_contig52546.1.1|Name=mRNA_P-wetherbeei_contig52546.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=181bp
KACSDLGLYVFIHPLAKVINWNRMDADDLGRMFGWEFSLIIATIRLINSG
LLDELPELKVHFSHFSGGIGRYRGRYNGFQQRTKWGTSQIKGHNRQPKLG
VDHYLNNRLYYDCAGWAGPDPCGPLGADWVKFGLQELALSQCVFATDYPQ
AIRDPGEVLDYVKAVEVLDPNAKALVHGLNA
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mRNA from alignment at P-wetherbeei_contig52546:3..545+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig52546.1.1 ID=mRNA_P-wetherbeei_contig52546.1.1|Name=mRNA_P-wetherbeei_contig52546.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=543bp|location=Sequence derived from alignment at P-wetherbeei_contig52546:3..545+ (Phaeothamnion wetherbeei SAG_119_79)
AAGGCGTGCAGCGATCTCGGGCTTTACGTTTTCATCCATCCGCTTGCCAA GGTCATCAACTGGAACCGGATGGACGCCGACGATCTCGGCCGGATGTTCG GCTGGGAGTTCTCGCTCATCATCGCGACGATCCGGCTCATCAACTCCGGC CTGCTCGACGAATTGCCGGAGCTGAAGGTCCACTTCTCGCATTTTTCCGG CGGCATCGGCCGCTATCGCGGTCGCTACAACGGATTCCAGCAGCGCACCA AGTGGGGCACGTCGCAGATCAAGGGGCACAACCGGCAGCCGAAGCTCGGC GTCGATCATTATCTCAATAACCGGCTCTACTACGACTGCGCCGGCTGGGC CGGTCCCGATCCGTGTGGGCCGCTCGGCGCCGATTGGGTGAAGTTCGGTC TCCAGGAGCTGGCACTGTCGCAATGCGTGTTCGCGACGGACTATCCGCAG GCGATCCGCGATCCCGGCGAGGTGCTGGATTATGTGAAGGCGGTGGAAGT GCTCGACCCCAATGCGAAGGCGCTGGTGCATGGGCTCAATGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig52546:3..545+

>mRNA_P-wetherbeei_contig52546.1.1 ID=mRNA_P-wetherbeei_contig52546.1.1|Name=mRNA_P-wetherbeei_contig52546.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=543bp|location=Sequence derived from alignment at P-wetherbeei_contig52546:3..545+ (Phaeothamnion wetherbeei SAG_119_79)
AAGGCGTGCAGCGATCTCGGGCTTTACGTTTTCATCCATCCGCTTGCCAA
GGTCATCAACTGGAACCGGATGGACGCCGACGATCTCGGCCGGATGTTCG
GCTGGGAGTTCTCGCTCATCATCGCGACGATCCGGCTCATCAACTCCGGC
CTGCTCGACGAATTGCCGGAGCTGAAGGTCCACTTCTCGCATTTTTCCGG
CGGCATCGGCCGCTATCGCGGTCGCTACAACGGATTCCAGCAGCGCACCA
AGTGGGGCACGTCGCAGATCAAGGGGCACAACCGGCAGCCGAAGCTCGGC
GTCGATCATTATCTCAATAACCGGCTCTACTACGACTGCGCCGGCTGGGC
CGGTCCCGATCCGTGTGGGCCGCTCGGCGCCGATTGGGTGAAGTTCGGTC
TCCAGGAGCTGGCACTGTCGCAATGCGTGTTCGCGACGGACTATCCGCAG
GCGATCCGCGATCCCGGCGAGGTGCTGGATTATGTGAAGGCGGTGGAAGT
GCTCGACCCCAATGCGAAGGCGCTGGTGCATGGGCTCAATGCC
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