mRNA_P-wetherbeei_contig52513.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52513.1.1 vs. uniprot
Match: A0A2D9SK93_9GAMM (Choline dehydrogenase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2D9SK93_9GAMM) HSP 1 Score: 296 bits (759), Expect = 5.970e-99 Identity = 127/178 (71.35%), Postives = 150/178 (84.27%), Query Frame = 1
Query: 4 PNVRARVTDYPVNNEASPIQIANFNGVGGGTVLYAAHFPRFHPGDFRVRSCDGVADDWPIDYATLEPFFALNDRMMGVAGLSGDPAYPDHELPLPPLPLGAAGEMMARAFNRLGWHWWPSDSAIASRPYEGRDRCLNLGPCTSGCAQGAKGSTDVTYWPEAIRRGVQLRTRGRARGLT 537
PN+R R TDYP+NN+ SPI + NFNGVGGGTVLYAAHFPR HP DF+V+S DGVADDWPI Y TL+P+F NDRMMGV+GL+GDP YP + PLPP+P+G GE +A +N+LGWHWWPSDSAI +RPYEGRD+CLNLGPC SGC+QGAK STD+TYWP+AIR GV+LRTR R R +T
Sbjct: 68 PNIRRRDTDYPINNDESPINVVNFNGVGGGTVLYAAHFPRLHPSDFKVKSLDGVADDWPISYDTLDPYFNQNDRMMGVSGLAGDPMYPPKQPPLPPIPMGLVGEKLASGYNKLGWHWWPSDSAIITRPYEGRDKCLNLGPCMSGCSQGAKSSTDITYWPQAIRSGVELRTRCRVREIT 245
BLAST of mRNA_P-wetherbeei_contig52513.1.1 vs. uniprot
Match: A0A2E7XCF6_9GAMM (Choline dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E7XCF6_9GAMM) HSP 1 Score: 301 bits (770), Expect = 1.430e-97 Identity = 131/178 (73.60%), Postives = 152/178 (85.39%), Query Frame = 1
Query: 4 PNVRARVTDYPVNNEASPIQIANFNGVGGGTVLYAAHFPRFHPGDFRVRSCDGVADDWPIDYATLEPFFALNDRMMGVAGLSGDPAYPDHELPLPPLPLGAAGEMMARAFNRLGWHWWPSDSAIASRPYEGRDRCLNLGPCTSGCAQGAKGSTDVTYWPEAIRRGVQLRTRGRARGLT 537
PNVRA TDYP+NN+ SPI + NFNGVGGGT+LYAAHFPR HP DF+V+S DGVADDWP+DY LEP+FALNDR MGV+GLSGDPAYP + PLP +PLG GE +A+ +N+LGWHWWPSDSAI S+PYEGRD+CLNLGPC SGC+QGAK STD+TYWPEAIR GV+LRTR R R +T
Sbjct: 64 PNVRAHDTDYPINNDNSPITVVNFNGVGGGTILYAAHFPRLHPSDFKVKSLDGVADDWPVDYDQLEPYFALNDRKMGVSGLSGDPAYPPKQPPLPHIPLGLVGETVAKGYNKLGWHWWPSDSAIISQPYEGRDKCLNLGPCMSGCSQGAKSSTDITYWPEAIRAGVELRTRCRVREIT 241
BLAST of mRNA_P-wetherbeei_contig52513.1.1 vs. uniprot
Match: A0A521RRK8_9HYPH (GMC family oxidoreductase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521RRK8_9HYPH) HSP 1 Score: 298 bits (764), Expect = 1.140e-96 Identity = 131/179 (73.18%), Postives = 149/179 (83.24%), Query Frame = 1
Query: 1 NPNVRARVTDYPVNNEASPIQIANFNGVGGGTVLYAAHFPRFHPGDFRVRSCDGVADDWPIDYATLEPFFALNDRMMGVAGLSGDPAYPDHELPLPPLPLGAAGEMMARAFNRLGWHWWPSDSAIASRPYEGRDRCLNLGPCTSGCAQGAKGSTDVTYWPEAIRRGVQLRTRGRARGLT 537
NPN RA + DYP+NN SP+QI NFNGVGGGT++Y AHFPR HP DFRVR+ DGVADDWP+DYATLEPFFA NDRM GVAGLSGDPAYP HE+ +PPLPLG GE ARA N+LGWHWWPSD+AIA+ Y+GR C+NLG CT GCAQGAK STD+TYWP+AIR GV+LRTR R R +T
Sbjct: 62 NPNRRAGIADYPINNGTSPVQIVNFNGVGGGTIMYTAHFPRLHPSDFRVRTLDGVADDWPVDYATLEPFFAENDRMTGVAGLSGDPAYPAHEMQMPPLPLGRTGERFARALNKLGWHWWPSDAAIATVAYDGRAPCINLGHCTPGCAQGAKSSTDITYWPQAIRAGVELRTRSRVREIT 240
BLAST of mRNA_P-wetherbeei_contig52513.1.1 vs. uniprot
Match: A0A523M8N5_9GAMM (GMC family oxidoreductase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523M8N5_9GAMM) HSP 1 Score: 297 bits (761), Expect = 3.600e-96 Identity = 127/179 (70.95%), Postives = 151/179 (84.36%), Query Frame = 1
Query: 1 NPNVRARVTDYPVNNEASPIQIANFNGVGGGTVLYAAHFPRFHPGDFRVRSCDGVADDWPIDYATLEPFFALNDRMMGVAGLSGDPAYPDHELPLPPLPLGAAGEMMARAFNRLGWHWWPSDSAIASRPYEGRDRCLNLGPCTSGCAQGAKGSTDVTYWPEAIRRGVQLRTRGRARGLT 537
NPNVR TDYP+NN+ SPI + NFNGVGGGT+LYAAHFPR HP DFRV++ DGVADDWPI+Y LEP+F+ NDRMMGV+GL+GDP YP + PLPP+PLG GE +AR +N+LGWHWWPSDSAI +RPYEGRD+CLNLGPC SGC+QGAK S D+TYWPEA+R GV++RTR R R +T
Sbjct: 67 NPNVRGLETDYPINNDESPINVVNFNGVGGGTILYAAHFPRLHPSDFRVKTLDGVADDWPINYERLEPYFSKNDRMMGVSGLAGDPMYPPKQPPLPPIPLGLVGETIARGYNKLGWHWWPSDSAIITRPYEGRDQCLNLGPCMSGCSQGAKSSVDITYWPEALRSGVEIRTRCRVREIT 245
BLAST of mRNA_P-wetherbeei_contig52513.1.1 vs. uniprot
Match: A0A3N5N2I3_9PROT (GMC family oxidoreductase (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5N2I3_9PROT) HSP 1 Score: 295 bits (755), Expect = 7.170e-96 Identity = 131/176 (74.43%), Postives = 148/176 (84.09%), Query Frame = 1
Query: 1 NPNVRARVTDYPVNNEASPIQIANFNGVGGGTVLYAAHFPRFHPGDFRVRSCDGVADDWPIDYATLEPFFALNDRMMGVAGLSGDPAYPDHELPLPPLPLGAAGEMMARAFNRLGWHWWPSDSAIASRPYEGRDRCLNLGPCTSGCAQGAKGSTDVTYWPEAIRRGVQLRTRGRAR 528
NPN+RAR DYP+N+ SPI I NFNGVGG TVLYAAHFPR HP DFR R+ DGV +DWPIDY TLEPFFALNDRMMGVAGL+GDPAYP HE PLPP+P+G+ G MARAFN LGWHWWPSD+AIA+R YEGR+ C NLGPCT+GCA+GAK +TDVTYWP A+R GV+LRT R R
Sbjct: 13 NPNIRARPEDYPINDVDSPIAIVNFNGVGGSTVLYAAHFPRLHPSDFRTRTLDGVGEDWPIDYPTLEPFFALNDRMMGVAGLAGDPAYPRHEPPLPPVPMGSVGGTMARAFNALGWHWWPSDTAIATREYEGREACANLGPCTTGCAKGAKSTTDVTYWPGALRAGVELRTHCRVR 188
BLAST of mRNA_P-wetherbeei_contig52513.1.1 vs. uniprot
Match: A0A2E2YUW8_9GAMM (Choline dehydrogenase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E2YUW8_9GAMM) HSP 1 Score: 296 bits (758), Expect = 9.630e-96 Identity = 127/178 (71.35%), Postives = 148/178 (83.15%), Query Frame = 1
Query: 4 PNVRARVTDYPVNNEASPIQIANFNGVGGGTVLYAAHFPRFHPGDFRVRSCDGVADDWPIDYATLEPFFALNDRMMGVAGLSGDPAYPDHELPLPPLPLGAAGEMMARAFNRLGWHWWPSDSAIASRPYEGRDRCLNLGPCTSGCAQGAKGSTDVTYWPEAIRRGVQLRTRGRARGLT 537
PNVR TDYP+NN+ SPI + NFNGVGGGT+LYAAHFPR HP DF+V++ DGVADDWPI Y LEP+FALNDR MGV+GL+GDP YP H+ PLPP+PLG GE +A+ FN GWHWWPSDSAI S+PYEGRD+CLNLGPC +GCAQG K STD+TYWPEAIR GV+LRTR R R ++
Sbjct: 66 PNVRGLDTDYPINNDGSPINVVNFNGVGGGTILYAAHFPRLHPSDFKVKTLDGVADDWPIQYEDLEPYFALNDRKMGVSGLAGDPMYPPHQPPLPPIPLGLVGETVAKGFNXXGWHWWPSDSAIISQPYEGRDKCLNLGPCMTGCAQGGKSSTDITYWPEAIRSGVELRTRHRVREIS 243
BLAST of mRNA_P-wetherbeei_contig52513.1.1 vs. uniprot
Match: A0A523IGC2_9DELT (GMC family oxidoreductase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A523IGC2_9DELT) HSP 1 Score: 293 bits (749), Expect = 2.060e-94 Identity = 128/178 (71.91%), Postives = 149/178 (83.71%), Query Frame = 1
Query: 4 PNVRARVTDYPVNNEASPIQIANFNGVGGGTVLYAAHFPRFHPGDFRVRSCDGVADDWPIDYATLEPFFALNDRMMGVAGLSGDPAYPDHELPLPPLPLGAAGEMMARAFNRLGWHWWPSDSAIASRPYEGRDRCLNLGPCTSGCAQGAKGSTDVTYWPEAIRRGVQLRTRGRARGLT 537
PN R R DYP+N++ SPI ++NFN VGG T+LYAAHFPRFHP DF++R+ DGVADDWPIDYA LEP++A NDRMMGV+GL+GDPAYP +LPLPPLPLG G +AR FN+LGWHWWPSDSAIAS+PYEGR C+NLGPC GCAQGAK STDVTYWP A+R GV+LRTR R R +T
Sbjct: 64 PNSRRRREDYPINDDDSPISVSNFNAVGGSTILYAAHFPRFHPADFKLRTLDGVADDWPIDYARLEPYYAQNDRMMGVSGLAGDPAYPPKQLPLPPLPLGKLGHTLARGFNKLGWHWWPSDSAIASQPYEGRAACINLGPCILGCAQGAKASTDVTYWPVAVRNGVELRTRCRVREIT 241
BLAST of mRNA_P-wetherbeei_contig52513.1.1 vs. uniprot
Match: A0A2E4UTX6_9GAMM (Choline dehydrogenase n=3 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E4UTX6_9GAMM) HSP 1 Score: 293 bits (749), Expect = 2.230e-94 Identity = 129/178 (72.47%), Postives = 147/178 (82.58%), Query Frame = 1
Query: 4 PNVRARVTDYPVNNEASPIQIANFNGVGGGTVLYAAHFPRFHPGDFRVRSCDGVADDWPIDYATLEPFFALNDRMMGVAGLSGDPAYPDHELPLPPLPLGAAGEMMARAFNRLGWHWWPSDSAIASRPYEGRDRCLNLGPCTSGCAQGAKGSTDVTYWPEAIRRGVQLRTRGRARGLT 537
PNVR R TDYP+NN+ASPI + NFNGVGG TVLYAAHFPR P DFRV++ DGVAD+WPI Y TLEPFFA NDRMMGV+GL+GDP YP + PLPP+PLG GE +AR FN+LGWHWWPS SAI SRPY+GRD+C NLGPCTSGC+QG K STD+TYWP AIR GV+LRT R R +T
Sbjct: 67 PNVRGRDTDYPINNDASPISVVNFNGVGGSTVLYAAHFPRLSPSDFRVKTLDGVADNWPISYDTLEPFFATNDRMMGVSGLAGDPMYPPKQPPLPPIPLGLVGETVARGFNKLGWHWWPSXSAIXSRPYDGRDQCKNLGPCTSGCSQGGKSSTDITYWPNAIRSGVELRTNCRVREVT 244
BLAST of mRNA_P-wetherbeei_contig52513.1.1 vs. uniprot
Match: A0A3C0TDN4_9GAMM (Choline dehydrogenase (Fragment) n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3C0TDN4_9GAMM) HSP 1 Score: 290 bits (741), Expect = 3.390e-94 Identity = 124/178 (69.66%), Postives = 149/178 (83.71%), Query Frame = 1
Query: 4 PNVRARVTDYPVNNEASPIQIANFNGVGGGTVLYAAHFPRFHPGDFRVRSCDGVADDWPIDYATLEPFFALNDRMMGVAGLSGDPAYPDHELPLPPLPLGAAGEMMARAFNRLGWHWWPSDSAIASRPYEGRDRCLNLGPCTSGCAQGAKGSTDVTYWPEAIRRGVQLRTRGRARGLT 537
PNVR R TDYPVNN+ SPI +ANFNGVGGGT+LYA HFPRFHP DFRV++ DGVA+DWPIDY TL P++ NDRMMGV+GL GDPAYP +PP+PLG +G M+A FN+LGWHWWPSDSA+A++ Y+GRD+C+NLG CT+GCAQGAK STD+TYWP A+R GV+LRTR R R +T
Sbjct: 64 PNVRGRTTDYPVNNDNSPISVANFNGVGGGTILYAGHFPRFHPSDFRVKTLDGVAEDWPIDYDTLAPYYDENDRMMGVSGLEGDPAYPPKPAVMPPVPLGKSGTMLANGFNKLGWHWWPSDSAVATQQYDGRDQCINLGACTTGCAQGAKASTDITYWPHAMRAGVELRTRCRVREIT 241
BLAST of mRNA_P-wetherbeei_contig52513.1.1 vs. uniprot
Match: A0A7C7U960_9DELT (GMC family oxidoreductase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C7U960_9DELT) HSP 1 Score: 293 bits (750), Expect = 3.780e-94 Identity = 131/178 (73.60%), Postives = 148/178 (83.15%), Query Frame = 1
Query: 4 PNVRARVTDYPVNNEASPIQIANFNGVGGGTVLYAAHFPRFHPGDFRVRSCDGVADDWPIDYATLEPFFALNDRMMGVAGLSGDPAYPDHELPLPPLPLGAAGEMMARAFNRLGWHWWPSDSAIASRPYEGRDRCLNLGPCTSGCAQGAKGSTDVTYWPEAIRRGVQLRTRGRARGLT 537
PN R R DYP+N++ SPI+I+NFN VGG T+LYAAHFPR HP DFRV+S DGVADDWPIDYATLEPF+ LN RMMGVAGLSGDPAYP ELPLPP+PLG GE + R FNRLGWHWWPSDSAIA++ Y GR C+NLGPC +GCAQGAKGSTDVTYWP A+R GV+LRT R R +T
Sbjct: 100 PNGRGRREDYPINDDDSPIKISNFNAVGGSTILYAAHFPRLHPSDFRVKSLDGVADDWPIDYATLEPFYDLNARMMGVAGLSGDPAYPPKELPLPPVPLGRLGETLGRGFNRLGWHWWPSDSAIATKEYAGRAACINLGPCLTGCAQGAKGSTDVTYWPVAVREGVELRTHCRVREIT 277 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52513.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52513.1.1 >prot_P-wetherbeei_contig52513.1.1 ID=prot_P-wetherbeei_contig52513.1.1|Name=mRNA_P-wetherbeei_contig52513.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=179bp NPNVRARVTDYPVNNEASPIQIANFNGVGGGTVLYAAHFPRFHPGDFRVRback to top mRNA from alignment at P-wetherbeei_contig52513:1..537+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52513.1.1 ID=mRNA_P-wetherbeei_contig52513.1.1|Name=mRNA_P-wetherbeei_contig52513.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=537bp|location=Sequence derived from alignment at P-wetherbeei_contig52513:1..537+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52513:1..537+ >mRNA_P-wetherbeei_contig52513.1.1 ID=mRNA_P-wetherbeei_contig52513.1.1|Name=mRNA_P-wetherbeei_contig52513.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=537bp|location=Sequence derived from alignment at P-wetherbeei_contig52513:1..537+ (Phaeothamnion wetherbeei SAG_119_79)back to top |