mRNA_P-wetherbeei_contig5251.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5251.1.2 vs. uniprot
Match: D8LI01_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI01_ECTSI) HSP 1 Score: 194 bits (493), Expect = 3.900e-52 Identity = 127/368 (34.51%), Postives = 171/368 (46.47%), Query Frame = 1
Query: 115 RASGVLFIPASGRSRPGIHNVLGALGEELLADGCPSVALNGLAVYGPGGRGRGVGDGIGVGGTGXXXXXXXXXXXXXSVLARPVGALKMLPFLPDGSTPVLAALVGAGRFSNGGXXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAAVNRSLGLDFGPLLYQALLEPDVVAAVVRLWRVHPMAAAAGVSLLGSSGERVVCERMDKRLAAYANWREPPPEEVGPLDEAALMGLPLHRLFFMADHSREVEVLKDPLLALLGQR-ASLTRGIPQMIEVLPPGASKGRGVMELLAALGIPRSQVVAVGDEINDIEMLQLVGCGVAMGQALDEVKAVASWVAPTNDEDGVAAVIETFCNV 1215
RA G++F+PASGRS+ G+ +V+G LG+EL DG P V +NGL VYG G DG NG D G +++ L+ P++ A VV W+ HP+A AAGVSL GS GE +V E +D R +++ +W EP P+EVG EA G+ L+RL+F V+ ++ L L A LTRG+P+MIEVLP GASK G+ LL LG+ +V+AVGD ND+EML+ VG G+AMGQA EV+ A + APTN+ GVA +ETFC +
Sbjct: 276 RAKGIIFVPASGRSKLGMISVMGELGQELQRDGSPIVCMNGLTVYGQG----------------------------------------------DG---------------NG------------------------------------------------------DLGEIIHSELMCPELAARVVAFWKAHPLAEAAGVSLCGSEGETIVVETLDPRTSSFPDWGEPLPKEVGSWQEAIAGGMGLNRLYFWGPTRAAVDAFEEDLKEHLQDHPAELTRGVPEMIEVLPHGASKAVGLEALLKTLGVSPEEVIAVGDMENDVEMLRSVGHGIAMGQASLEVRRAARFTAPTNELHGVAVALETFCGI 528
BLAST of mRNA_P-wetherbeei_contig5251.1.2 vs. uniprot
Match: A0A6H5J9Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Y9_9PHAE) HSP 1 Score: 152 bits (385), Expect = 7.770e-37 Identity = 122/402 (30.35%), Postives = 163/402 (40.55%), Query Frame = 1
Query: 115 RASGVLFIPASGRSRPGIHNVLGALGEELLADGCPSVALNGLAVYGPGGRGRGVGDGIGVGGTGXXXXXXXXXXXXXSVLARPVGALKMLPFLPDGSTPVLAALVGAGRFSNGGXXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAAVNRSLGLDFGPLLYQALLEPDVVAAVVRLWRVHPMAAAAGVSLLGSSGERVVCERMDKRLAA-------YANWREPPPEEVGPLDEAALMGLPLHRLFFMADHSREVEVLKDPLLALLGQR-ASLTRGIPQMIEVLPPGASKGRGVMELLAALGIP---------------------------RSQVVAVGDEINDIEMLQLVGCGVAMGQALDEVKAVASWVAPTNDEDGVAAVIETFCNV 1215
RA G++F+PASGRS+ G+ + +G LG+EL DG P V +NGL VYG G DG NG D G +++ L+ ++ A VV W+ HP+A AAGVSL GS GE +V E +D R + + W E G EA G+ L+RL+F V+ ++ L L A LTRG+P+MIEVLP GASK G+ LL LG+ R +V+AVGD ND+EML+ VG G+AMGQA EV+ A + APTN+ GVA +ETFC +
Sbjct: 258 RAKGIIFVPASGRSKSGMISAMGELGQELQRDGSPFVCMNGLTVYGQG----------------------------------------------DG---------------NG------------------------------------------------------DLGEIIHSELMCLELAARVVAFWKAHPLAEAAGVSLCGSEGETIVVETLDPRTSRKVLGFELFGFWPCDSLRE-GSWQEAIAGGMGLNRLYFWGPTRAAVDAFEEDLKEHLKDHPAELTRGVPEMIEVLPHGASKAVGLEALLKTLGVSPEEVRGVSETVNWCRFGVGVGGWRGCMRQEVIAVGDMENDVEMLRSVGHGIAMGQASLEVRRAARFTAPTNELHGVAVALETFCGI 543
BLAST of mRNA_P-wetherbeei_contig5251.1.2 vs. uniprot
Match: A0A6H5KW38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW38_9PHAE) HSP 1 Score: 139 bits (350), Expect = 2.510e-34 Identity = 77/191 (40.31%), Postives = 111/191 (58.12%), Query Frame = 1
Query: 628 LLYQALLEPDVVAAVVRLWRVHPMAAAAGVSLLGSSGERVVCERMDKRLAAYANWREPPPEEVGPLDEAALMGLPLHRLFFMADHSREVEVLKDPLLALLGQRASLTRGIPQMIEVLPPGASKGRGVMELLAALGIPRSQVVAVGDEINDIEMLQLVGCGVAMGQALDEVKAVASWVAPTNDEDGVAAVIE 1200
+LY+ LL+ ++V+ V GVSL+ SG+ +VC D A + EP P VGPL +A GL +H+L M D ++ ++ + L+G RA+ T+ +P M+EVLP GASKG GV LL LGI +++A+GD ND+EML+L G GV +G A +A A ++APTN DG A +E
Sbjct: 60 VLYERLLDIEIVSQVASFCEER------GVSLIAYSGDEIVCSEKDAETDKIALYSEPMPSAVGPLTDAMAAGLRVHKLILM-DSKEAIDRVRPDIERLIGDRATFTQALPDMLEVLPAGASKGHGVNVLLKHLGIDPVRLMALGDAENDVEMLRLAGVGVCVGNASPPARAAARFMAPTNANDGSAVAME 243
BLAST of mRNA_P-wetherbeei_contig5251.1.2 vs. uniprot
Match: A0A2P6V5Y3_9CHLO (Haloacid dehalogenase-like hydrolase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V5Y3_9CHLO) HSP 1 Score: 138 bits (347), Expect = 3.030e-34 Identity = 82/193 (42.49%), Postives = 115/193 (59.59%), Query Frame = 1
Query: 628 LLYQALLEPDVVAAVVRLWRVHPMAAAAGVSLLGSSGERVVCERMDKRLAAYANWREPPPEEVGPLDEAALMGLPLHRLFFMADHSREVEVLKDPLLALLGQRASLTRGIPQMIEVLPPGASKGRGVMELLAALGIPRSQVVAVGDEINDIEMLQLVGCGVAMGQALDEVKAVASWVAPTNDEDGVAAVIETF 1206
+LY LE D++ + H G++L G+R++C+ D++ ++EP PE +GPL + + LP+++L FM + +R +E L+ + A+ RASLT I M+EVLP GASKG GV LL LG+ + +A+GD ND+EMLQL G GVAMG A V AVA V +NDEDGVA IE F
Sbjct: 33 ILYSRQLEEDIILEAIAFAEQH------GLTLTAYCGDRIMCKERDEQSDRLIWYKEPTPEGIGPL-QPHVGRLPIYKLIFMQEANRIIE-LRPQVEAMFAGRASLTTAISGMLEVLPLGASKGTGVAWLLDRLGVDPAACLALGDGENDVEMLQLAGLGVAMGNAGPPVLAVADAVTASNDEDGVARAIERF 217
BLAST of mRNA_P-wetherbeei_contig5251.1.2 vs. uniprot
Match: A0A835TDN6_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TDN6_CHLIN) HSP 1 Score: 140 bits (354), Expect = 3.690e-34 Identity = 89/200 (44.50%), Postives = 118/200 (59.00%), Query Frame = 1
Query: 622 GPLLYQALLEPDVVAAVVRLWRVHPMAAAAGVSLLGSSGERVVCERMDKRLAAYANWREPPPEEVGPLDEAALM----GLPLHRLFFMADHSREVEVLKDPLLALLGQRASLTRGIPQMIEVLPPGASKGRGVMELLAALGIPRSQVVAVGDEINDIEMLQLVGCGVAMGQALDEVKAVASWVAP-TNDEDGVAAVIETF 1206
G +L++ LE DV + L AA AGV+L G+R++C D ++EPPPE VG L AA++ G+P+H++ FMAD R ++ L+ + ALL RASLT + M+EVLP G SKG G+ LL L + QV+A+GD ND+EMLQL G GVAMG A + KA A V TND+DGVA I F
Sbjct: 119 GQVLHERRLEEDVALDCIAL------AAGAGVTLTAYCGDRILCAATDAHTDRLNFYKEPPPEAVGEL--AAVVSGGGGVPVHKMIFMADQDR-IDALRPAVEALLAGRASLTTALTGMLEVLPLGCSKGAGLSWLLEWLDVAPGQVMALGDGENDVEMLQLAGLGVAMGNAGPKAKAAADVVLEATNDQDGVAEAIRRF 309
BLAST of mRNA_P-wetherbeei_contig5251.1.2 vs. uniprot
Match: A0A2J7ZUF5_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZUF5_9CHLO) HSP 1 Score: 138 bits (347), Expect = 4.780e-34 Identity = 87/197 (44.16%), Postives = 116/197 (58.88%), Query Frame = 1
Query: 622 GPLLYQALLEPDVVAAVVRLWRVHPMAAAAGVSLLGSSGERVVCERMDKRLAAYANWREPPPEEVGPLDEAALMG-LPLHRLFFMADHSREVEVLKDPLLALLGQRASLTRGIPQMIEVLPPGASKGRGVMELLAALGIPRSQVVAVGDEINDIEMLQLVGCGVAMGQALDEVKAVASWVAP-TNDEDGVAAVIETF 1206
G LY+ L DV + L AA GV+L GER++C D ++EPPPE VG D AA++G + +H++ FMA+ E++ ++ + LLG RASLT + M+EVLP GASKG G+ LLA LG+ V+A+GD ND+EMLQL G G+AMG A + KA A V TNDEDGVA I +
Sbjct: 44 GNRLYEQQLPGDVATDCIAL------AAEQGVTLTAYCGERILCAATDSHTDRLNFYKEPPPEAVG--DLAAVVGTVEIHKMIFMAEQ-HEIDAMRPAVERLLGGRASLTTALSGMLEVLPLGASKGSGLSWLLAHLGVKPENVMALGDGENDVEMLQLAGLGIAMGNAGAKAKAAADVVLDETNDEDGVARAIMQY 231
BLAST of mRNA_P-wetherbeei_contig5251.1.2 vs. uniprot
Match: A0A061S7R0_9CHLO (Haloacid dehalogenase-like hydrolase n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S7R0_9CHLO) HSP 1 Score: 140 bits (353), Expect = 5.340e-34 Identity = 89/197 (45.18%), Postives = 116/197 (58.88%), Query Frame = 1
Query: 622 GPLLYQALLEPDVVAAVVRLWRVHPMAAAAGVSLLGSSGERVVCERMDKRLAAYANWREPPPEEVGPLDEAALMGLPLHRLFFMADHSR--EVEVLKDPLLALLGQRASLTRGIPQMIEVLPPGASKGRGVMELLAALGIPRSQVVAVGDEINDIEMLQLVGCGVAMGQALDEVKAVASWVAPTNDEDGVAAVIETF 1206
G LLY LE D+ VV R G++L GER++CE ++ + ++EP PE VGPL E+ L +P+ ++ FMA+ R E+ L + LLA RASLT + M+EVLP GASKG GV LL L + V+ +GD NDIEML+LVG GVAMG VK VA VAP+ND+DGVA IE +
Sbjct: 130 GKLLYSRDLEADICRDVVAFAR------REGLTLTAYCGERILCEEVNDQTDRLLFYKEPTPEGVGPL-ESILGEVPVQKMIFMAEQERIDEIRPLAEKLLA---GRASLTTALTGMLEVLPLGASKGEGVRMLLERLQVDPEDVLGMGDGENDIEMLKLVGLGVAMGNGKQIVKEVADAVAPSNDDDGVAWAIEQY 316
BLAST of mRNA_P-wetherbeei_contig5251.1.2 vs. uniprot
Match: A0A150GAB9_GONPE (Uncharacterized protein n=2 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GAB9_GONPE) HSP 1 Score: 139 bits (349), Expect = 6.880e-34 Identity = 84/197 (42.64%), Postives = 121/197 (61.42%), Query Frame = 1
Query: 622 GPLLYQALLEPDVVAAVVRLWRVHPMAAAAGVSLLGSSGERVVCERMDKRLAAYANWREPPPEEVGPLDEAALMG-LPLHRLFFMADHSREVEVLKDPLLALLGQRASLTRGIPQMIEVLPPGASKGRGVMELLAALGIPRSQVVAVGDEINDIEMLQLVGCGVAMGQALDEVKAVASWVAP-TNDEDGVAAVIETF 1206
G +L++ L +V +RL A V+L+ GER++C D + +REPPPE VG D A++G +P+H++ FMA+ +R ++ ++ + +LLG RASLT + M+EVLP GASKG G+ LL LG+ + V+A+GD ND+EML +VG GVAMG A + KA A V TND+DGVA IE +
Sbjct: 82 GAVLHEQRLPDEVATDCIRL------AKELDVTLVAYCGERILCAATDAHTERFNFYREPPPEPVG--DLGAILGRVPVHKMIFMAEQAR-IDEIRPGVESLLGGRASLTTALSGMLEVLPLGASKGAGLRWLLDHLGVDPAHVMALGDGENDVEMLAMVGLGVAMGNAAPKAKASADVVLEETNDQDGVARAIEEY 269
BLAST of mRNA_P-wetherbeei_contig5251.1.2 vs. uniprot
Match: A8HYJ4_CHLRE (HDH1p n=3 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HYJ4_CHLRE) HSP 1 Score: 139 bits (349), Expect = 1.750e-33 Identity = 90/200 (45.00%), Postives = 118/200 (59.00%), Query Frame = 1
Query: 616 DFGPLLYQALLEPDVVAAVVRLWRVHPMAAAAGVSLLGSSGERVVCERMDKRLAAYANWREPPPEEVGPLDEAALMG--LPLHRLFFMADHSREVEVLKDPLLALLGQRASLTRGIPQMIEVLPPGASKGRGVMELLAALGIPRSQVVAVGDEINDIEMLQLVGCGVAMGQALDEVKAVASWV-APTNDEDGVAAVIETF 1206
D G +L++ L DV + L AA GV+L G+R++C D ++EPPPE VG L AAL G +P+H++ FMAD R ++ L+ ALL RASLT + M+EVLP G SKG G+ LL LG+ QV+A+GD ND+EMLQL G GVAMG A + +A A V A TND+DGVA I+ F
Sbjct: 114 DQGRVLHERRLCEDVARDCITL------AADVGVTLTAYCGDRILCAATDVHTDRLLFYKEPPPEPVGDL-AAALGGGGVPVHKMIFMADQDR-IDALRPAAEALLDGRASLTTALTGMLEVLPLGGSKGAGLSWLLDWLGVAPEQVLALGDGENDVEMLQLAGLGVAMGNAGPKARAAADVVLAATNDQDGVAEAIQRF 305
BLAST of mRNA_P-wetherbeei_contig5251.1.2 vs. uniprot
Match: A0A836C2C3_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C2C3_9CHLO) HSP 1 Score: 137 bits (345), Expect = 5.120e-33 Identity = 88/197 (44.67%), Postives = 113/197 (57.36%), Query Frame = 1
Query: 622 GPLLYQALLEPDVVAAVVRLWRVHPMAAAAGVSLLGSSGERVVCERMDKRLAAYANWREPPPEEVGPLDEAALMGLP-LHRLFFMADHSREVEVLKDPLLALLGQRASLTRGIPQMIEVLPPGASKGRGVMELLAALGIPRSQVVAVGDEINDIEMLQLVGCGVAMGQALDEVKAVASWVAP-TNDEDGVAAVIETF 1206
G LY L DV + L A GV+L GER++C D ++EPPPE VG D +G+ +H++ FMAD S+ ++ L+ ALLG RASLT + M+EVLP GASKG G+ LLA LG+ V+A+GD ND+EMLQL G GVAMG A + KA A V TND+DGVAA I +
Sbjct: 113 GRRLYDQRLPDDVARDCIEL------AEREGVTLTAYCGERILCAATDAHTDRLNFYKEPPPEAVG--DMRRQVGVTEMHKMIFMADQSK-IDALRPHAEALLGGRASLTTALTGMLEVLPLGASKGEGLRWLLAHLGVEPQHVMALGDGENDVEMLQLAGLGVAMGNAGPKAKAAADVVLDETNDQDGVAAAIRAY 300 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5251.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5251.1.2 >prot_P-wetherbeei_contig5251.1.2 ID=prot_P-wetherbeei_contig5251.1.2|Name=mRNA_P-wetherbeei_contig5251.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=280bp MLPFLPDGSTPVLAALVGAGRFSNGGGGAAAAAATAEAMAAAAEAVAMATback to top mRNA from alignment at P-wetherbeei_contig5251:2..2802+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5251.1.2 ID=mRNA_P-wetherbeei_contig5251.1.2|Name=mRNA_P-wetherbeei_contig5251.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2801bp|location=Sequence derived from alignment at P-wetherbeei_contig5251:2..2802+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5251:2..2802+ >mRNA_P-wetherbeei_contig5251.1.2 ID=mRNA_P-wetherbeei_contig5251.1.2|Name=mRNA_P-wetherbeei_contig5251.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=840bp|location=Sequence derived from alignment at P-wetherbeei_contig5251:2..2802+ (Phaeothamnion wetherbeei SAG_119_79)back to top |