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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1967 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-07_003250.1 |
| Cds size | 1776 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186786.456761-UTR-P-wetherbeei_contig525:7223..7334 | 1683186786.456761-UTR-P-wetherbeei_contig525:7223..7334 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig525 7224..7334 + |
| 1683186786.479387-UTR-P-wetherbeei_contig525:9110..9190 | 1683186786.479387-UTR-P-wetherbeei_contig525:9110..9190 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig525 9111..9190 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186786.4687881-CDS-P-wetherbeei_contig525:7334..9110 | 1683186786.4687881-CDS-P-wetherbeei_contig525:7334..9110 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig525 7335..9110 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig525.6.1 >prot_P-wetherbeei_contig525.6.1 ID=prot_P-wetherbeei_contig525.6.1|Name=mRNA_P-wetherbeei_contig525.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=592bp
MMAPSSWLSIDLPGHDDNSSESAVVDDKRPLGSTRDLIGALVRAEAGKAS
GALLLSDGVPSPGSSCVGGTGAGADPAATDPVVMNQETVDKVVGAVASYA
RRYKLPRTAGEQRKKDKERSRRRPLGRRFVDIGDPELYDNFRDADLGGAA
GDATRLPLRLLADYDESVDEAARRANMDRFGDVREGIPSTLAQMQYFNGR
SLAARNRWKDPAYRNRMVSARYGKGNSVGGADDASGAGAAAGCGGGSGAN
SSSSGVGDIGGIGGGSGIACDAALDPGIAGGADGPAGGAGTRRGDTGRKA
VAGAYSENLPVVAAEEQRKREGGSSSTAAAAAAATDQEKARAEAVTAAET
AVAARRPAWVKAKKAREAARKVVADTAAIDGILRATNITTADVLRALAAQ
GPAEAVRRSKLRRRYSEPQRWMADRLDAGTDRRRILWEDDARAVRQTKRS
EKALRSWETRRENAAAAAAARAAEAAAAAAAVAIEAIAVAGEGAAVLDVG
AAVTGSTVKRVGAAAAAATVVDSVGEASGAEPATAVKSHAGTAAAVSAVA
EAAAAASPARRGRPKQKAAGTVAVAAAVPAVPAHPRRPAFD* back to topmRNA from alignment at P-wetherbeei_contig525:7224..9190+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig525.6.1 ID=mRNA_P-wetherbeei_contig525.6.1|Name=mRNA_P-wetherbeei_contig525.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1967bp|location=Sequence derived from alignment at P-wetherbeei_contig525:7224..9190+ (Phaeothamnion wetherbeei SAG_119_79)
GTCTCTCGAAGGCATATTTTCTTTGCGCTCCTCGCCGCCGCTCTGCCGCT
CCAGACGTGCCCGCTGCTCGCCATCATTCGTCTAGCGAAGAGGCCGCGAG
GCAACCTCCTTATGATGGCCCCGTCGAGCTGGCTGTCCATTGACCTCCCC
GGACATGATGACAACTCTAGCGAAAGCGCGGTGGTTGACGATAAACGCCC
GCTCGGCAGCACTCGCGACCTTATCGGAGCGCTCGTTAGGGCCGAGGCCG
GCAAAGCAAGCGGTGCGTTACTTCTTTCAGACGGCGTTCCCTCTCCTGGC
AGCAGCTGTGTAGGCGGCACCGGCGCCGGCGCCGATCCCGCCGCTACCGA
CCCCGTCGTCATGAACCAGGAGACTGTCGACAAGGTGGTTGGCGCGGTGG
CCTCCTACGCCCGCCGTTACAAGCTGCCGCGGACGGCCGGAGAGCAGCGC
AAAAAGGACAAGGAGCGCTCCCGCCGCCGGCCGCTGGGCCGCCGCTTCGT
CGACATCGGCGACCCCGAGCTCTATGACAACTTCCGCGACGCCGACCTCG
GCGGCGCCGCCGGCGACGCTACGCGGCTGCCGCTGCGTCTGCTGGCAGAT
TACGATGAAAGCGTAGACGAGGCGGCGCGCCGCGCCAACATGGACCGTTT
CGGGGACGTCCGCGAGGGGATTCCGAGCACGCTGGCGCAGATGCAGTACT
TCAACGGCCGGTCGCTGGCGGCGCGGAACCGCTGGAAAGACCCCGCATAC
CGCAACAGGATGGTGTCGGCGCGCTACGGCAAAGGAAACAGCGTTGGTGG
CGCTGACGACGCTAGCGGCGCCGGCGCCGCTGCCGGCTGCGGCGGTGGCA
GTGGGGCCAATAGCAGCAGCAGCGGCGTTGGCGACATTGGTGGCATTGGC
GGCGGCAGTGGGATCGCCTGCGACGCCGCTTTGGATCCTGGTATCGCCGG
CGGCGCCGACGGCCCCGCCGGAGGCGCTGGTACAAGGCGTGGCGACACGG
GGCGCAAGGCCGTCGCAGGTGCGTATAGCGAAAACCTTCCTGTGGTCGCG
GCGGAAGAGCAGAGAAAAAGGGAAGGCGGGAGCAGCAGCACGGCGGCGGC
GGCAGCGGCGGCGACTGACCAGGAGAAGGCGCGTGCCGAGGCGGTCACGG
CGGCAGAGACGGCGGTGGCGGCCCGGCGACCGGCGTGGGTGAAGGCGAAG
AAGGCGCGCGAAGCGGCCAGGAAGGTGGTGGCAGACACGGCGGCCATTGA
TGGGATCCTGCGTGCGACCAACATCACGACGGCGGACGTCCTCCGGGCGC
TGGCGGCGCAGGGCCCCGCGGAGGCGGTCCGGCGGTCGAAGCTCCGGCGG
CGCTACTCGGAGCCGCAGCGGTGGATGGCGGATCGGCTGGACGCCGGCAC
CGACCGGCGGCGCATCCTGTGGGAGGACGACGCCCGGGCGGTGCGCCAGA
CGAAGCGCTCCGAAAAGGCGCTCAGGAGCTGGGAGACGCGCCGCGAGAAC
GCCGCCGCCGCCGCGGCGGCCCGCGCCGCCGAAGCCGCTGCTGCCGCTGC
CGCCGTCGCCATCGAAGCCATTGCAGTTGCCGGGGAAGGTGCTGCTGTAT
TGGATGTTGGTGCGGCAGTGACCGGTTCTACGGTGAAACGTGTCGGCGCC
GCCGCAGCGGCCGCGACCGTGGTGGATTCAGTCGGAGAAGCTTCTGGCGC
AGAGCCCGCCACTGCTGTCAAATCGCATGCTGGAACCGCTGCGGCAGTGT
CTGCGGTTGCAGAAGCCGCCGCGGCGGCATCACCGGCGAGAAGAGGAAGG
CCGAAGCAAAAGGCGGCGGGCACAGTAGCCGTGGCAGCGGCGGTGCCAGC
GGTGCCGGCGCATCCAAGGCGGCCCGCATTTGACTAGTTTCTCTTTAGGG
TGATTAACCTTACTTTTCCGTGGAGCCGTTCTCGGCGGTTCGGTGGCGTC
CGTGTGTAGTATACTTC back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig525:7224..9190+ >mRNA_P-wetherbeei_contig525.6.1 ID=mRNA_P-wetherbeei_contig525.6.1|Name=mRNA_P-wetherbeei_contig525.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1776bp|location=Sequence derived from alignment at P-wetherbeei_contig525:7224..9190+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATGGCCCCGTCGAGCTGGCTGTCCATTGACCTCCCCGGACATGATGA
CAACTCTAGCGAAAGCGCGGTGGTTGACGATAAACGCCCGCTCGGCAGCA
CTCGCGACCTTATCGGAGCGCTCGTTAGGGCCGAGGCCGGCAAAGCAAGC
GGTGCGTTACTTCTTTCAGACGGCGTTCCCTCTCCTGGCAGCAGCTGTGT
AGGCGGCACCGGCGCCGGCGCCGATCCCGCCGCTACCGACCCCGTCGTCA
TGAACCAGGAGACTGTCGACAAGGTGGTTGGCGCGGTGGCCTCCTACGCC
CGCCGTTACAAGCTGCCGCGGACGGCCGGAGAGCAGCGCAAAAAGGACAA
GGAGCGCTCCCGCCGCCGGCCGCTGGGCCGCCGCTTCGTCGACATCGGCG
ACCCCGAGCTCTATGACAACTTCCGCGACGCCGACCTCGGCGGCGCCGCC
GGCGACGCTACGCGGCTGCCGCTGCGTCTGCTGGCAGATTACGATGAAAG
CGTAGACGAGGCGGCGCGCCGCGCCAACATGGACCGTTTCGGGGACGTCC
GCGAGGGGATTCCGAGCACGCTGGCGCAGATGCAGTACTTCAACGGCCGG
TCGCTGGCGGCGCGGAACCGCTGGAAAGACCCCGCATACCGCAACAGGAT
GGTGTCGGCGCGCTACGGCAAAGGAAACAGCGTTGGTGGCGCTGACGACG
CTAGCGGCGCCGGCGCCGCTGCCGGCTGCGGCGGTGGCAGTGGGGCCAAT
AGCAGCAGCAGCGGCGTTGGCGACATTGGTGGCATTGGCGGCGGCAGTGG
GATCGCCTGCGACGCCGCTTTGGATCCTGGTATCGCCGGCGGCGCCGACG
GCCCCGCCGGAGGCGCTGGTACAAGGCGTGGCGACACGGGGCGCAAGGCC
GTCGCAGGTGCGTATAGCGAAAACCTTCCTGTGGTCGCGGCGGAAGAGCA
GAGAAAAAGGGAAGGCGGGAGCAGCAGCACGGCGGCGGCGGCAGCGGCGG
CGACTGACCAGGAGAAGGCGCGTGCCGAGGCGGTCACGGCGGCAGAGACG
GCGGTGGCGGCCCGGCGACCGGCGTGGGTGAAGGCGAAGAAGGCGCGCGA
AGCGGCCAGGAAGGTGGTGGCAGACACGGCGGCCATTGATGGGATCCTGC
GTGCGACCAACATCACGACGGCGGACGTCCTCCGGGCGCTGGCGGCGCAG
GGCCCCGCGGAGGCGGTCCGGCGGTCGAAGCTCCGGCGGCGCTACTCGGA
GCCGCAGCGGTGGATGGCGGATCGGCTGGACGCCGGCACCGACCGGCGGC
GCATCCTGTGGGAGGACGACGCCCGGGCGGTGCGCCAGACGAAGCGCTCC
GAAAAGGCGCTCAGGAGCTGGGAGACGCGCCGCGAGAACGCCGCCGCCGC
CGCGGCGGCCCGCGCCGCCGAAGCCGCTGCTGCCGCTGCCGCCGTCGCCA
TCGAAGCCATTGCAGTTGCCGGGGAAGGTGCTGCTGTATTGGATGTTGGT
GCGGCAGTGACCGGTTCTACGGTGAAACGTGTCGGCGCCGCCGCAGCGGC
CGCGACCGTGGTGGATTCAGTCGGAGAAGCTTCTGGCGCAGAGCCCGCCA
CTGCTGTCAAATCGCATGCTGGAACCGCTGCGGCAGTGTCTGCGGTTGCA
GAAGCCGCCGCGGCGGCATCACCGGCGAGAAGAGGAAGGCCGAAGCAAAA
GGCGGCGGGCACAGTAGCCGTGGCAGCGGCGGTGCCAGCGGTGCCGGCGC
ATCCAAGGCGGCCCGCATTTGACTAG back to top
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