mRNA_P-wetherbeei_contig5248.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5248.4.1 vs. uniprot
Match: A0A346A3V0_9HYPH (ATP-dependent Clp protease adapter protein ClpS n=2 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A3V0_9HYPH) HSP 1 Score: 211 bits (536), Expect = 3.720e-68 Identity = 104/115 (90.43%), Postives = 108/115 (93.91%), Query Frame = 1
Query: 67 APRMADDDRKRKSPNPGDPSVAVITKTKPQTKRPNMYRVLILNDDYTPMEFVTHVLERFFSKDNEAATRIMLHVHHHGIGECGIFTYEVAETKVTQVMDFARKHQHPLQCVMEKK 411
APRMADDDRK+K PG P AVITKTKPQTKRPNMYRVLILNDDYTPMEFV HV+ERFFSKD+EAATRIMLHVHHHGIGECGI+TYEVAETKVTQVMDFARKHQHPLQCVMEKK
Sbjct: 22 APRMADDDRKKKG-EPGGPGTAVITKTKPQTKRPNMYRVLILNDDYTPMEFVVHVIERFFSKDHEAATRIMLHVHHHGIGECGIYTYEVAETKVTQVMDFARKHQHPLQCVMEKK 135
BLAST of mRNA_P-wetherbeei_contig5248.4.1 vs. uniprot
Match: A0A0Q7U4C6_9HYPH (ATP-dependent Clp protease adapter protein ClpS n=4 Tax=unclassified Pseudolabrys TaxID=2638514 RepID=A0A0Q7U4C6_9HYPH) HSP 1 Score: 207 bits (527), Expect = 4.280e-67 Identity = 100/113 (88.50%), Postives = 109/113 (96.46%), Query Frame = 1
Query: 76 MADDDRKRKSP-NPGDPSVAVITKTKPQTKRPNMYRVLILNDDYTPMEFVTHVLERFFSKDNEAATRIMLHVHHHGIGECGIFTYEVAETKVTQVMDFARKHQHPLQCVMEKK 411
MADDDRKR +P PG+P+VAVITKTKPQTKRPN+YRVLILNDDYTPMEFV HVLERFFSKD++AATRIMLHVHHHG+GECG++TYEVAETKVTQVMDFARKHQHPLQCVMEKK
Sbjct: 1 MADDDRKRANPPTPGEPNVAVITKTKPQTKRPNLYRVLILNDDYTPMEFVVHVLERFFSKDHDAATRIMLHVHHHGMGECGVYTYEVAETKVTQVMDFARKHQHPLQCVMEKK 113
BLAST of mRNA_P-wetherbeei_contig5248.4.1 vs. uniprot
Match: A0A1W7A111_9HYPH (ATP-dependent Clp protease adapter protein ClpS n=2 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W7A111_9HYPH) HSP 1 Score: 202 bits (514), Expect = 8.110e-65 Identity = 99/117 (84.62%), Postives = 108/117 (92.31%), Query Frame = 1
Query: 61 REAPRMADDDRKRKSPNPGDPSVAVITKTKPQTKRPNMYRVLILNDDYTPMEFVTHVLERFFSKDNEAATRIMLHVHHHGIGECGIFTYEVAETKVTQVMDFARKHQHPLQCVMEKK 411
R APRMADDDRK++ +PG P +VITKTKPQTKRP+MYRVL+LNDDYTPMEFV HVLERFF+KD EAAT+IMLHVHHHGIGECGI+TYEVAETKVTQVMDFARKH HPLQCVMEKK
Sbjct: 19 RFAPRMADDDRKKRQ-DPGGPGTSVITKTKPQTKRPSMYRVLLLNDDYTPMEFVVHVLERFFNKDREAATQIMLHVHHHGIGECGIYTYEVAETKVTQVMDFARKHHHPLQCVMEKK 134
BLAST of mRNA_P-wetherbeei_contig5248.4.1 vs. uniprot
Match: A0A6N7GYU8_9HYPH (ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GYU8_9HYPH) HSP 1 Score: 197 bits (500), Expect = 8.780e-63 Identity = 96/114 (84.21%), Postives = 104/114 (91.23%), Query Frame = 1
Query: 70 PRMADDDRKRKSPNPGDPSVAVITKTKPQTKRPNMYRVLILNDDYTPMEFVTHVLERFFSKDNEAATRIMLHVHHHGIGECGIFTYEVAETKVTQVMDFARKHQHPLQCVMEKK 411
PR+A+DD KR NPG P AVITKTKPQTKRPN+YRVLILNDDYTPMEFV HVLERFF+KD+E+A RIM+HVH HGIGECG+FTYEVAETKVTQVMDFARKHQHPLQCVMEKK
Sbjct: 15 PRLANDDNKRAG-NPGAPGTAVITKTKPQTKRPNLYRVLILNDDYTPMEFVVHVLERFFNKDHESAYRIMMHVHEHGIGECGVFTYEVAETKVTQVMDFARKHQHPLQCVMEKK 127
BLAST of mRNA_P-wetherbeei_contig5248.4.1 vs. uniprot
Match: A0A3S4BYN4_9HYPH (ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Rhodoplanes piscinae TaxID=444923 RepID=A0A3S4BYN4_9HYPH) HSP 1 Score: 198 bits (503), Expect = 1.020e-62 Identity = 98/114 (85.96%), Postives = 103/114 (90.35%), Query Frame = 1
Query: 70 PRMADDDRKRKSPNPGDPSVAVITKTKPQTKRPNMYRVLILNDDYTPMEFVTHVLERFFSKDNEAATRIMLHVHHHGIGECGIFTYEVAETKVTQVMDFARKHQHPLQCVMEKK 411
PR A+ DRKR+ G P AVITKTKPQTKRPN+YRVL+LNDDYTPMEFV HVLERFF+KD EAATRIMLHVHHHGIGECGIFTYEVAETKVTQVMDFARKHQHPLQCVMEKK
Sbjct: 52 PRAANGDRKRRQDQTG-PGTAVITKTKPQTKRPNLYRVLLLNDDYTPMEFVVHVLERFFNKDREAATRIMLHVHHHGIGECGIFTYEVAETKVTQVMDFARKHQHPLQCVMEKK 164
BLAST of mRNA_P-wetherbeei_contig5248.4.1 vs. uniprot
Match: A0A327KTP9_9HYPH (ATP-dependent Clp protease adapter protein ClpS n=2 Tax=Rhodoplanes elegans TaxID=29408 RepID=A0A327KTP9_9HYPH) HSP 1 Score: 196 bits (498), Expect = 1.240e-62 Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 1
Query: 70 PRMADDDRKRKSPNPGDPSVAVITKTKPQTKRPNMYRVLILNDDYTPMEFVTHVLERFFSKDNEAATRIMLHVHHHGIGECGIFTYEVAETKVTQVMDFARKHQHPLQCVMEKK 411
P A+ DRKR+ +P P AVITKTKPQTKRPN+YRVL+LNDDYTPMEFV HVLERFF+KD EAATRIMLHVHHHGIGECGIFTYEVAETKVTQVMDFARKHQHPLQCVMEKK
Sbjct: 4 PTAANGDRKRRQ-DPTGPGTAVITKTKPQTKRPNLYRVLLLNDDYTPMEFVVHVLERFFNKDREAATRIMLHVHHHGIGECGIFTYEVAETKVTQVMDFARKHQHPLQCVMEKK 116
BLAST of mRNA_P-wetherbeei_contig5248.4.1 vs. uniprot
Match: A0A1C3WCE0_9BRAD (ATP-dependent Clp protease adapter protein ClpS n=10 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A1C3WCE0_9BRAD) HSP 1 Score: 195 bits (496), Expect = 3.930e-62 Identity = 96/122 (78.69%), Postives = 109/122 (89.34%), Query Frame = 1
Query: 46 NASAAREAPRMADDDRKRKSPNPGDPSVAVITKTKPQTKRPNMYRVLILNDDYTPMEFVTHVLERFFSKDNEAATRIMLHVHHHGIGECGIFTYEVAETKVTQVMDFARKHQHPLQCVMEKK 411
+A AA +APRM++DD + S P PS +VITK KP+TKRPN+YRVLILNDDYTPMEFV HVLE+FF+KD EAAT+IMLHVHHHGIGECG+FTYE+AETKVTQVMDFARKHQHPLQCVMEKK
Sbjct: 11 SAPAAADAPRMSNDDNR--SGTPSGPSTSVITKVKPKTKRPNLYRVLILNDDYTPMEFVVHVLEKFFNKDIEAATKIMLHVHHHGIGECGVFTYEIAETKVTQVMDFARKHQHPLQCVMEKK 130
BLAST of mRNA_P-wetherbeei_contig5248.4.1 vs. uniprot
Match: A0A363TIQ5_9BRAD (ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TIQ5_9BRAD) HSP 1 Score: 195 bits (495), Expect = 4.600e-62 Identity = 95/114 (83.33%), Postives = 103/114 (90.35%), Query Frame = 1
Query: 70 PRMADDDRKRKSPNPGDPSVAVITKTKPQTKRPNMYRVLILNDDYTPMEFVTHVLERFFSKDNEAATRIMLHVHHHGIGECGIFTYEVAETKVTQVMDFARKHQHPLQCVMEKK 411
PR+ DD+R+R+ P AVITKTKPQTKRPN+YRVL+LNDDYTPMEFV HVLERFF+KD EAATRIMLHVHHHGIGECGI+TYEVAETKVTQVMDFARKHQHPLQCVMEKK
Sbjct: 13 PRLGDDERRRRGDQA--PGSAVITKTKPQTKRPNLYRVLLLNDDYTPMEFVVHVLERFFNKDREAATRIMLHVHHHGIGECGIYTYEVAETKVTQVMDFARKHQHPLQCVMEKK 124
BLAST of mRNA_P-wetherbeei_contig5248.4.1 vs. uniprot
Match: A0A1Q4DPA2_9HYPH (ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DPA2_9HYPH) HSP 1 Score: 194 bits (494), Expect = 5.560e-62 Identity = 91/112 (81.25%), Postives = 105/112 (93.75%), Query Frame = 1
Query: 76 MADDDRKRKSPNPGDPSVAVITKTKPQTKRPNMYRVLILNDDYTPMEFVTHVLERFFSKDNEAATRIMLHVHHHGIGECGIFTYEVAETKVTQVMDFARKHQHPLQCVMEKK 411
MADDD++R++ +PG P AVI+KT+PQ KRP++YRVLILNDDYTPMEFV HV+ERFFSKD+EAA RIMLHVH+HGIGECG++TYEVAETKVTQVMDFARKHQHPLQCVMEKK
Sbjct: 8 MADDDKRRRNGDPGAPGTAVISKTRPQVKRPSLYRVLILNDDYTPMEFVVHVIERFFSKDHEAANRIMLHVHNHGIGECGVYTYEVAETKVTQVMDFARKHQHPLQCVMEKK 119
BLAST of mRNA_P-wetherbeei_contig5248.4.1 vs. uniprot
Match: A0A6L5FS00_9HYPH (ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FS00_9HYPH) HSP 1 Score: 194 bits (494), Expect = 7.440e-62 Identity = 95/113 (84.07%), Postives = 103/113 (91.15%), Query Frame = 1
Query: 73 RMADDDRKRKSPNPGDPSVAVITKTKPQTKRPNMYRVLILNDDYTPMEFVTHVLERFFSKDNEAATRIMLHVHHHGIGECGIFTYEVAETKVTQVMDFARKHQHPLQCVMEKK 411
R+ADDDRKR+ +PG P AVI+K KPQTKRP++YRVLILNDDYTPMEFV HVLE FF+KD E ATRIMLHVHHHGIGECGI+TYEVAETKVTQVMDFARKHQHPLQCVMEKK
Sbjct: 18 RLADDDRKRR--DPGAPGTAVISKAKPQTKRPSLYRVLILNDDYTPMEFVVHVLESFFNKDRETATRIMLHVHHHGIGECGIYTYEVAETKVTQVMDFARKHQHPLQCVMEKK 128 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5248.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5248.4.1 >prot_P-wetherbeei_contig5248.4.1 ID=prot_P-wetherbeei_contig5248.4.1|Name=mRNA_P-wetherbeei_contig5248.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=138bp MTLTARHNSSAAAGRNASAAREAPRMADDDRKRKSPNPGDPSVAVITKTKback to top mRNA from alignment at P-wetherbeei_contig5248:2679..3092+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5248.4.1 ID=mRNA_P-wetherbeei_contig5248.4.1|Name=mRNA_P-wetherbeei_contig5248.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig5248:2679..3092+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5248:2679..3092+ >mRNA_P-wetherbeei_contig5248.4.1 ID=mRNA_P-wetherbeei_contig5248.4.1|Name=mRNA_P-wetherbeei_contig5248.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig5248:2679..3092+ (Phaeothamnion wetherbeei SAG_119_79)back to top |