mRNA_P-wetherbeei_contig5243.1.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Match: A0A836C8N7_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N7_9STRA) HSP 1 Score: 330 bits (847), Expect = 6.240e-101 Identity = 214/533 (40.15%), Postives = 280/533 (52.53%), Query Frame = 2
Query: 344 AAPSTRVVEDDVKECFLRWAKDDIGVELHPGISLFHAFREDYRGVIATRDIEAGEVLVRIRQASCIGPAAEDATREEWTQAMTSAGVRSMTGPSFTDCGGPNGSAAAXXXXXXXVPAADGSXXXXXXXXGMPPAPGPADAAASVSPPKQXXXXXXXXXXXXSAASAGLAPPSSPHLTKACFTVLRLLHELGLGDASPFAPYLAVLPCAHRIPIQWTAEERALLRGTAAETLAAAGRLEKDFRVFEAVRALHPGLWAAGVCTAEAFARAVMWVRSRGFTVFGDPFMVPCADMFNHDPDQQNVEF---RSDGEAHFEMVAVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVPIPTATVTAACERMFRRLAAAKTEAXXXXXXXXXXEAGMTTEATTADAVAVAAADAAATESWKRRIGMARGQGLLPAEG--FVVSKYDLMPEDLVSLLQVLTMSDDPTLVYGAMLEVVADKMASYAIRKESVEVIVDDLYASDAYDVARALVREEHKVLQDLGAQLRRE-ILEGDED 1924
AAPST +V+ KE FL W + + +H I LFH F E YRGV+A DI G L+RI + CIGPA +DA+ E+W +AM AG+ + X LT ACFTVLRLLHELG G + F+ YL++LP HRIP++W AEERALL+GTAAE L +G LE + VFE + HPGLWA VC++ AFA+AV WVRSRGFTV G+P+M+PCADMFNH+P Q+ F D F M AV+ +P+G E+F+S G++ N LV+S+GFVL N FD+V +P V AC F L + E XXXXXXXX +W++R+ M RG G+L +E FV++KYD++PE L +Q L ++DP +VYGA++ V+A+K+ SYA D +DA V ALVREE L DL AQL RE ++ GDED
Sbjct: 5 AAPSTLLVDSTRKEAFLEWCVAEQNIVIHDSIDLFHTFSEGYRGVVAKDDIPEGTELLRISRECCIGPATDDASAEQWRRAMGQAGIGNXXXXXXXXX--------------------------------------------------------------XXXXXXXXXXXXXXKLTSACFTVLRLLHELGEGGKAHFSNYLSILPRDHRIPLEWNAEERALLQGTAAEPLVLSGNLEGQYSVFEELVKEHPGLWAKEVCSSAAFAKAVNWVRSRGFTVHGEPYMIPCADMFNHNPSDQSAMFGQASEDSADVFVMRAVKSIPKGSEVFSSFGQIANAQLVNSYGFVLPQNPFDSVLVPAKLVIDACRAAFANLERSGEEGGEXXXXXXXXXV---------------------ERAWQKRLDMLRGGGVLVSEEEQFVLTKYDMLPEPLAEAIQSLLFTEDPLVVYGALVAVIAEKLQSYA----PAAAFEADSVRADARAVVEALVREETVFLTDLKAQLMRECMMMGDED 450
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Match: D7FPV0_ECTSI (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV0_ECTSI) HSP 1 Score: 285 bits (728), Expect = 1.700e-83 Identity = 161/361 (44.60%), Postives = 214/361 (59.28%), Query Frame = 2
Query: 854 PSSPHLTKACFTVLRLLHELGLGDASPFAPYLAVLPCAHRIPIQWTAEERALLRGTAAETLAAAGRLEKDFRVFEAVRALHPGLWAAGVCTAEAFARAVMWVRSRGFTVFGDPFMVPCADMFNHDPDQQNVEFRSDGEAHFEMVAVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVPIPTATVTAACERMFRRLAAAKTEAXXXXXXXXXXEAGMTTEATTADAVAVAAADAAATESWKRRIGMA---RGQGLLPAEGFVVSKYDLMPEDLVSLLQVLTMSDDPTLVYGAMLEVVADKMASYA-IRKESVEVIVDDLYASDAYDVARALVREEHKVLQDLGAQLRREILEGDED 1924
P +P LT+AC TVLRLLHE GLG++SPF YL+VLP HR+P++WT E LL+GT+AE L AG L+ F F++V A HP +W VCT AFA+ V WVRSRGFTV GDP M+P ADMFNHDP++Q+V+ +DGE HF M V+ V G E+F+S G + N L++S+GFVL N+FDTV IPT V C F +L A K +A ++W++R+ M R E FVVSKYDL+PE L ++Q+LTMS+D + Y + V KM Y+ + +++ + +DA +AR LV EE KVLQDL QL IL+ +ED
Sbjct: 125 PPAPRLTRACLTVLRLLHERGLGESSPFHSYLSVLPQDHRLPLEWTEAEVGLLQGTSAEPLVGAGSLDSQFEAFQSVVAQHPTVWEPSVCTKAAFAKGVNWVRSRGFTVMGDPHMIPGADMFNHDPNKQSVQIGTDGEEHFVMKTVQPVKAGEEVFSSFGHISNAQLLNSYGFVLPGNSFDTVLIPTQLVVNTCYATFVKLEADKL------------------------------GEAETKKTWEQRLAMVASNRDADEGEQEAFVVSKYDLLPESLADMVQILTMSNDEEVAYATIAAVSQAKMGQYSPLLQDAKRNAGEGAIGADARTLARMLVNEEKKVLQDLRLQLMSVILDDNED 455
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Match: A0A7S3C6F6_9CHLO (Hypothetical protein (Fragment) n=3 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3C6F6_9CHLO) HSP 1 Score: 82.8 bits (203), Expect = 4.500e-13 Identity = 67/202 (33.17%), Postives = 98/202 (48.51%), Query Frame = 2
Query: 890 VLRLLHELGLGDASPFAPYLAVLPCAHR-IPIQWTAEERALLRGTAAETLAAAGRLEKDFRV----FEAVRALHP------GLWAAGVCTAEAFARAVMWVRSRGFTV---FGDPFMVPCADMFNHDPDQQNVEFRSDGEAH----------FEMVAVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVPIPTATV 1423
++ ++HE LG+ S FAPYL ++P +P+ W ++ LRGT+ E ++++D ++ +EA+ + P G A T E FA A V SR F V GD MVP AD+FNH D ++V + E EM+ +R V RGGE+F + G N LV +GF DN V +P V
Sbjct: 18 IIAVMHERVLGNKSEFAPYLNLIPQREDGLPVFWPEDDLKSLRGTSLEH-----KIKQDTQLMSEDYEAI--VRPFFEEEGGAGAGEGFTEEDFAAAASVVASRAFRVDDRHGDG-MVPVADLFNHRTDAEHVRIYGEDEEDAEKESQDNGVLEMLLIRPVCRGGEVFNTFGVHGNQGLVHKYGFAELDNGHTVVDVPEEVV 211
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Match: A0A836CPE3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPE3_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.890e-12 Identity = 63/183 (34.43%), Postives = 88/183 (48.09%), Query Frame = 2
Query: 893 LRLLHELGLGDASPFAPYLAVLPCAHRIPIQWTAEERALLRGT--AAETLAAAGRLEKDF-RVFEAVRALHPGLWAAGVCTAEAFARAVMWVRSRGF-TVFGDPFMVPCADMFNHDPDQQNVEFRSDGEAHFEM------VAVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVPIP 1411
L ++HEL GDAS +APYLAVLP H W A A+L+ AA A + +L + + R A+ A +PG++ T + RA +R+R F +VP AD NH +F + G F + A VPRG E S GR N L+ +GF + DN +D V +P
Sbjct: 82 LYVMHELLRGDASFYAPYLAVLPAPHTAE-DWDATAVAVLQDERLAASADARSRQLTRAWERTMSALAASYPGMFPRETYTLALWRRAWGVIRARAFGRRLPWSALVPLADCLNHGNVPTKYDFDAGGNGVFRLWPSGGGSASVAVPRGCEALNSYGRRSNAHLLLEYGFAMLDNEWDEVAVP 263
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Match: UPI0005C9A027 (ribosomal lysine N-methyltransferase 3 n=2 Tax=Rosoideae TaxID=171638 RepID=UPI0005C9A027) HSP 1 Score: 73.6 bits (179), Expect = 7.500e-10 Identity = 67/230 (29.13%), Postives = 92/230 (40.00%), Query Frame = 2
Query: 893 LRLLHELGLGDASPFAPYLAVLPCAHRIPIQWTAEE-RALLRGTAAETLAAAGR--LEKDFRVFEAVRAL--HPGLWAAGVCTAEAFARAVMWVRSRGFTVFGDPF---MVPCADMFNHDPDQQNVEFRSDGEAH--------------------------------------------------FEMVAVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVPI 1408
+ ++HE LG+ SP+APYLAVLP IP+ WTAEE LLRGT + R + +D++ E++ L H G E + A + SR F V MVP AD+FNH ++V + + EMV V+ V G E+F + G L N L+ +GF DN FD V I
Sbjct: 83 VAIMHERSLGEQSPWAPYLAVLPEREAIPLVWTAEEAEELLRGTELQQTVKEDRTVMLEDWK--ESIEPLRDHIGTRFERFFGFEDYLAARTLIASRSFQVDDHHHGVGMVPLADIFNHKTGAEDVHLNTSASSEDSEXXXXXXXXXXXXXXXXXXXXXVGHTTGAXXXXXXXXXXXXXXXXXXDLEMVMVKDVKAGAEVFNTYGLLGNAALLHRYGFTEPDNPFDIVNI 310
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Match: A0A0A9SJ34_ARUDO (N-lysine methyltransferase n=2 Tax=Arundo donax TaxID=35708 RepID=A0A0A9SJ34_ARUDO) HSP 1 Score: 71.6 bits (174), Expect = 2.950e-9 Identity = 65/234 (27.78%), Postives = 100/234 (42.74%), Query Frame = 2
Query: 893 LRLLHELGLGDASPFAPYLAVLPCAHRIPIQWTAEERA-LLRGTAAETLAAAGRLEKDFRVFEAVRALHPGLWAAGVC-------TAEAFARAVMWVRSRGFTV-----FGDPFMVPCADMFNHDPDQQNVEFRS-----------DGEAH-------------------------FEMVAVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVPIPTATVTAACERMF 1447
L +++E G SP+ YL +LP +P+ W A+E LL GT + + + +++F + + P L +AG + E + A V SR F + FG MVP AD+FNH D ++V F S G+++ EM+ V+ V G E++ + G + N L+ +GF DN +D V I A VT C MF
Sbjct: 85 LAVMYERVRGSESPWDAYLRLLPDRESVPLVWPADETEHLLAGTELDKIV---KQDREFLCEDWKECIEP-LMSAGELDVDPDDFSLENYFSAKTLVSSRSFQIDSYHGFG---MVPLADLFNHKTDGEHVHFTSASDDSXXXXXXXGQSNASADDQSTVENSTSSPSGSRVNDEDLEMIVVKDVNEGEEVYNTYGTMGNAALLHRYGFTELDNPYDIVNIDLALVTKWCTSMF 311
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Match: A0A5D6XWK1_9STRA (SET domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWK1_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 4.170e-9 Identity = 62/183 (33.88%), Postives = 83/183 (45.36%), Query Frame = 2
Query: 893 LRLLHELGLGDASPFAPYLAVLPCAHRIPIQWTAEERALLRGTAAETLAAAGRLEKDF-----RVFEAVRALHPGLWAAGVCTAEAFARAVMWVRSRGFTVFGDPF----MVPCADMFNHDPDQQNVEFRSDGEAHFEMV--AVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVPI 1408
L L+ E GDAS FAPYLA+LP + W+ +E A L +AAA R + + VF A+ A HPG + T E F A +++R FG +VP AD NH +F F + A G E+F S GR N L+ +GF L+DN +D V I
Sbjct: 89 LFLVREQLKGDASFFAPYLAILPFPESVQ-DWSDDELAALHDR--RLVAAARRRQSEIDAAYDSVFAALDASHPGEFPRAQYTREKFVFAWKTIQAR---TFGRRLPWTALVPFADCLNHANVATKYDFDVARNGMFRLFPSAATAYAAGAEVFNSYGRRSNFHLLLDYGFALRDNEWDYVDI 265
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Match: A0A7S4DKW8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKW8_HETAK) HSP 1 Score: 67.8 bits (164), Expect = 7.640e-9 Identity = 67/239 (28.03%), Postives = 106/239 (44.35%), Query Frame = 2
Query: 1214 MFNHDPDQQNVEFRSDGEAH---------FEMVAVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVPIPTATVTAACERMFRRLAAAKTEAXXXXXXXXXXEAGMTTEATTADAVAVAAADAAATESWKRRIGMARGQGLLPAEGFVVSKYDLMPEDLVSLLQVLTMSDDPTLVYGAMLEVVADKMASYAIRKESVEVIVDDLYASDAYDVARALVREEHKVLQDLGAQLRRE 1903
M NHDP + F + E + F++VA R + E+F S G L N L++S+GF+L+DN FD V IP V E ++ K G TT++ + D ++S + MA + +G+++SKY+ + EDLV+ +Q + D VY + V+ K ASYA K + E +DA + LV++E VL Q+ +
Sbjct: 1 MLNHDPHRAGATFLQEEEGNGDSDGTGEVFKLVATRPLVANEEIFRSFGPLSNAMLLESYGFILEDNVFDRVIIPRHMV----EHCLKQQEQTK------------QLVGKTTDSQSVDE----------SDSTTQVFHMANKKNT--GQGYILSKYNPVSEDLVADVQHHLDTVDLERVYQVVWNVLGAKEASYA--KANKETNCCASVGTDALQIVHWLVQQEKSVLHRARQQIEEQ 209
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Match: B4FRT5_MAIZE (N-lysine methyltransferase n=9 Tax=Andropogoneae TaxID=147429 RepID=B4FRT5_MAIZE) HSP 1 Score: 70.1 bits (170), Expect = 9.100e-9 Identity = 61/232 (26.29%), Postives = 96/232 (41.38%), Query Frame = 2
Query: 893 LRLLHELGLGDASPFAPYLAVLPCAHRIPIQWTA-EERALLRGTAAETLAAAGRLEKDFRVFEAVRALHPGLWAAGV------CTAEAFARAVMWVRSRGFTV--FGDPFMVPCADMFNHDPDQQNVEFRS-------DGEAH-------------------------------FEMVAVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVPIPTATVTAACERMF 1447
+ +++E G SP+ YL +LP +P+ W A E LL GT + + + +K+F + + P + + + + E + A V SR F + + MVP AD+FNH D ++V F S DGE E++ VR V G E++ + G + N L+ +GF DN +D V I A VT C +F
Sbjct: 87 VAVMYERAQGADSPWDAYLQLLPDCESVPLVWPAGEAECLLAGTELDKIV---KQDKEFLCEDWKECIEPLMLSGELDVDPDDFSLEKYLSAKTLVSSRSFQIDSYHGSGMVPLADLFNHKTDCEHVHFTSASDASDSDGEXXXXXXSDASADDKPTTKNPTSSPPGSRANDEDLEIIIVRDVNEGEEVYNTYGTMGNAALLHRYGFTELDNQYDIVNIDLALVTKWCTSIF 315
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Match: A0A2I0A2Y2_9ASPA (Pentatricopeptide repeat-containing protein n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0A2Y2_9ASPA) HSP 1 Score: 70.1 bits (170), Expect = 1.500e-8 Identity = 66/230 (28.70%), Postives = 95/230 (41.30%), Query Frame = 2
Query: 893 LRLLHELGLGDASPFAPYLAVLPCAHRIPIQWTAEE-RALLRGTAAETLAAAGR--LEKDFRVF-EAVRALHPGLWAAGVCTAEAFARAVMWVRSRGFTV-----FGDPFMVPCADMFNHDPDQQNVEFR-------SDGEAHF-----------------------------EMVAVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVPIPTATVTAACERMF 1447
+ L++E LG ASP+ YL +LP +PI WT++E LL GT + L +D++ + E + P + + E + A V SR F + FG MVP AD+FNH ++V F SD E F EM+ VR + G E+F + G + N L+ +GF DN +D V I V C F
Sbjct: 558 VALMYERSLGTASPWHGYLQLLPLRECVPIIWTSDEVDELLVGTELHKTVKEDKRFLHEDWKHYIEPLILSGPLMIDPKSFSVEQYFAAKSLVSSRSFDIDDYHGFG---MVPLADLFNHKTGGEHVHFTLASPCSSSDDEGDFGVTDTSGDESSSMKYFDGISGYNSHPVTLEMIVVREIDPGAEVFNTYGTIGNAALLHRYGFTEPDNPYDIVNIDLELVMRWCFSKF 784 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5243.1.4 >prot_P-wetherbeei_contig5243.1.4 ID=prot_P-wetherbeei_contig5243.1.4|Name=mRNA_P-wetherbeei_contig5243.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=663bp MPGAGKKAAAAAPEATTGGSSDGTDGGSGGGRGGGGGRPRSGSVTLAAPSback to top mRNA from alignment at P-wetherbeei_contig5243:123..3834+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5243.1.4 ID=mRNA_P-wetherbeei_contig5243.1.4|Name=mRNA_P-wetherbeei_contig5243.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3712bp|location=Sequence derived from alignment at P-wetherbeei_contig5243:123..3834+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5243:123..3834+ >mRNA_P-wetherbeei_contig5243.1.4 ID=mRNA_P-wetherbeei_contig5243.1.4|Name=mRNA_P-wetherbeei_contig5243.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1989bp|location=Sequence derived from alignment at P-wetherbeei_contig5243:123..3834+ (Phaeothamnion wetherbeei SAG_119_79)back to top |