mRNA_P-wetherbeei_contig5243.1.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5243.1.4
Unique NamemRNA_P-wetherbeei_contig5243.1.4
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Match: A0A836C8N7_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N7_9STRA)

HSP 1 Score: 330 bits (847), Expect = 6.240e-101
Identity = 214/533 (40.15%), Postives = 280/533 (52.53%), Query Frame = 2
Query:  344 AAPSTRVVEDDVKECFLRWAKDDIGVELHPGISLFHAFREDYRGVIATRDIEAGEVLVRIRQASCIGPAAEDATREEWTQAMTSAGVRSMTGPSFTDCGGPNGSAAAXXXXXXXVPAADGSXXXXXXXXGMPPAPGPADAAASVSPPKQXXXXXXXXXXXXSAASAGLAPPSSPHLTKACFTVLRLLHELGLGDASPFAPYLAVLPCAHRIPIQWTAEERALLRGTAAETLAAAGRLEKDFRVFEAVRALHPGLWAAGVCTAEAFARAVMWVRSRGFTVFGDPFMVPCADMFNHDPDQQNVEF---RSDGEAHFEMVAVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVPIPTATVTAACERMFRRLAAAKTEAXXXXXXXXXXEAGMTTEATTADAVAVAAADAAATESWKRRIGMARGQGLLPAEG--FVVSKYDLMPEDLVSLLQVLTMSDDPTLVYGAMLEVVADKMASYAIRKESVEVIVDDLYASDAYDVARALVREEHKVLQDLGAQLRRE-ILEGDED 1924
            AAPST +V+   KE FL W   +  + +H  I LFH F E YRGV+A  DI  G  L+RI +  CIGPA +DA+ E+W +AM  AG+ +                                                                       X              LT ACFTVLRLLHELG G  + F+ YL++LP  HRIP++W AEERALL+GTAAE L  +G LE  + VFE +   HPGLWA  VC++ AFA+AV WVRSRGFTV G+P+M+PCADMFNH+P  Q+  F     D    F M AV+ +P+G E+F+S G++ N  LV+S+GFVL  N FD+V +P   V  AC   F  L  +  E   XXXXXXXX                         +W++R+ M RG G+L +E   FV++KYD++PE L   +Q L  ++DP +VYGA++ V+A+K+ SYA           D   +DA  V  ALVREE   L DL AQL RE ++ GDED
Sbjct:    5 AAPSTLLVDSTRKEAFLEWCVAEQNIVIHDSIDLFHTFSEGYRGVVAKDDIPEGTELLRISRECCIGPATDDASAEQWRRAMGQAGIGNXXXXXXXXX--------------------------------------------------------------XXXXXXXXXXXXXXKLTSACFTVLRLLHELGEGGKAHFSNYLSILPRDHRIPLEWNAEERALLQGTAAEPLVLSGNLEGQYSVFEELVKEHPGLWAKEVCSSAAFAKAVNWVRSRGFTVHGEPYMIPCADMFNHNPSDQSAMFGQASEDSADVFVMRAVKSIPKGSEVFSSFGQIANAQLVNSYGFVLPQNPFDSVLVPAKLVIDACRAAFANLERSGEEGGEXXXXXXXXXV---------------------ERAWQKRLDMLRGGGVLVSEEEQFVLTKYDMLPEPLAEAIQSLLFTEDPLVVYGALVAVIAEKLQSYA----PAAAFEADSVRADARAVVEALVREETVFLTDLKAQLMRECMMMGDED 450          
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Match: D7FPV0_ECTSI (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV0_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 1.700e-83
Identity = 161/361 (44.60%), Postives = 214/361 (59.28%), Query Frame = 2
Query:  854 PSSPHLTKACFTVLRLLHELGLGDASPFAPYLAVLPCAHRIPIQWTAEERALLRGTAAETLAAAGRLEKDFRVFEAVRALHPGLWAAGVCTAEAFARAVMWVRSRGFTVFGDPFMVPCADMFNHDPDQQNVEFRSDGEAHFEMVAVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVPIPTATVTAACERMFRRLAAAKTEAXXXXXXXXXXEAGMTTEATTADAVAVAAADAAATESWKRRIGMA---RGQGLLPAEGFVVSKYDLMPEDLVSLLQVLTMSDDPTLVYGAMLEVVADKMASYA-IRKESVEVIVDDLYASDAYDVARALVREEHKVLQDLGAQLRREILEGDED 1924
            P +P LT+AC TVLRLLHE GLG++SPF  YL+VLP  HR+P++WT  E  LL+GT+AE L  AG L+  F  F++V A HP +W   VCT  AFA+ V WVRSRGFTV GDP M+P ADMFNHDP++Q+V+  +DGE HF M  V+ V  G E+F+S G + N  L++S+GFVL  N+FDTV IPT  V   C   F +L A K                                +A   ++W++R+ M    R       E FVVSKYDL+PE L  ++Q+LTMS+D  + Y  +  V   KM  Y+ + +++     +    +DA  +AR LV EE KVLQDL  QL   IL+ +ED
Sbjct:  125 PPAPRLTRACLTVLRLLHERGLGESSPFHSYLSVLPQDHRLPLEWTEAEVGLLQGTSAEPLVGAGSLDSQFEAFQSVVAQHPTVWEPSVCTKAAFAKGVNWVRSRGFTVMGDPHMIPGADMFNHDPNKQSVQIGTDGEEHFVMKTVQPVKAGEEVFSSFGHISNAQLLNSYGFVLPGNSFDTVLIPTQLVVNTCYATFVKLEADKL------------------------------GEAETKKTWEQRLAMVASNRDADEGEQEAFVVSKYDLLPESLADMVQILTMSNDEEVAYATIAAVSQAKMGQYSPLLQDAKRNAGEGAIGADARTLARMLVNEEKKVLQDLRLQLMSVILDDNED 455          
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Match: A0A7S3C6F6_9CHLO (Hypothetical protein (Fragment) n=3 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3C6F6_9CHLO)

HSP 1 Score: 82.8 bits (203), Expect = 4.500e-13
Identity = 67/202 (33.17%), Postives = 98/202 (48.51%), Query Frame = 2
Query:  890 VLRLLHELGLGDASPFAPYLAVLPCAHR-IPIQWTAEERALLRGTAAETLAAAGRLEKDFRV----FEAVRALHP------GLWAAGVCTAEAFARAVMWVRSRGFTV---FGDPFMVPCADMFNHDPDQQNVEFRSDGEAH----------FEMVAVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVPIPTATV 1423
            ++ ++HE  LG+ S FAPYL ++P     +P+ W  ++   LRGT+ E      ++++D ++    +EA+  + P      G  A    T E FA A   V SR F V    GD  MVP AD+FNH  D ++V    + E             EM+ +R V RGGE+F + G   N  LV  +GF   DN    V +P   V
Sbjct:   18 IIAVMHERVLGNKSEFAPYLNLIPQREDGLPVFWPEDDLKSLRGTSLEH-----KIKQDTQLMSEDYEAI--VRPFFEEEGGAGAGEGFTEEDFAAAASVVASRAFRVDDRHGDG-MVPVADLFNHRTDAEHVRIYGEDEEDAEKESQDNGVLEMLLIRPVCRGGEVFNTFGVHGNQGLVHKYGFAELDNGHTVVDVPEEVV 211          
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Match: A0A836CPE3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPE3_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.890e-12
Identity = 63/183 (34.43%), Postives = 88/183 (48.09%), Query Frame = 2
Query:  893 LRLLHELGLGDASPFAPYLAVLPCAHRIPIQWTAEERALLRGT--AAETLAAAGRLEKDF-RVFEAVRALHPGLWAAGVCTAEAFARAVMWVRSRGF-TVFGDPFMVPCADMFNHDPDQQNVEFRSDGEAHFEM------VAVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVPIP 1411
            L ++HEL  GDAS +APYLAVLP  H     W A   A+L+    AA   A + +L + + R   A+ A +PG++     T   + RA   +R+R F        +VP AD  NH       +F + G   F +       A   VPRG E   S GR  N  L+  +GF + DN +D V +P
Sbjct:   82 LYVMHELLRGDASFYAPYLAVLPAPHTAE-DWDATAVAVLQDERLAASADARSRQLTRAWERTMSALAASYPGMFPRETYTLALWRRAWGVIRARAFGRRLPWSALVPLADCLNHGNVPTKYDFDAGGNGVFRLWPSGGGSASVAVPRGCEALNSYGRRSNAHLLLEYGFAMLDNEWDEVAVP 263          
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Match: UPI0005C9A027 (ribosomal lysine N-methyltransferase 3 n=2 Tax=Rosoideae TaxID=171638 RepID=UPI0005C9A027)

HSP 1 Score: 73.6 bits (179), Expect = 7.500e-10
Identity = 67/230 (29.13%), Postives = 92/230 (40.00%), Query Frame = 2
Query:  893 LRLLHELGLGDASPFAPYLAVLPCAHRIPIQWTAEE-RALLRGTAAETLAAAGR--LEKDFRVFEAVRAL--HPGLWAAGVCTAEAFARAVMWVRSRGFTVFGDPF---MVPCADMFNHDPDQQNVEFRSDGEAH--------------------------------------------------FEMVAVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVPI 1408
            + ++HE  LG+ SP+APYLAVLP    IP+ WTAEE   LLRGT  +      R  + +D++  E++  L  H G         E +  A   + SR F V        MVP AD+FNH    ++V   +   +                                                    EMV V+ V  G E+F + G L N  L+  +GF   DN FD V I
Sbjct:   83 VAIMHERSLGEQSPWAPYLAVLPEREAIPLVWTAEEAEELLRGTELQQTVKEDRTVMLEDWK--ESIEPLRDHIGTRFERFFGFEDYLAARTLIASRSFQVDDHHHGVGMVPLADIFNHKTGAEDVHLNTSASSEDSEXXXXXXXXXXXXXXXXXXXXXVGHTTGAXXXXXXXXXXXXXXXXXXDLEMVMVKDVKAGAEVFNTYGLLGNAALLHRYGFTEPDNPFDIVNI 310          
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Match: A0A0A9SJ34_ARUDO (N-lysine methyltransferase n=2 Tax=Arundo donax TaxID=35708 RepID=A0A0A9SJ34_ARUDO)

HSP 1 Score: 71.6 bits (174), Expect = 2.950e-9
Identity = 65/234 (27.78%), Postives = 100/234 (42.74%), Query Frame = 2
Query:  893 LRLLHELGLGDASPFAPYLAVLPCAHRIPIQWTAEERA-LLRGTAAETLAAAGRLEKDFRVFEAVRALHPGLWAAGVC-------TAEAFARAVMWVRSRGFTV-----FGDPFMVPCADMFNHDPDQQNVEFRS-----------DGEAH-------------------------FEMVAVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVPIPTATVTAACERMF 1447
            L +++E   G  SP+  YL +LP    +P+ W A+E   LL GT  + +    + +++F   +    + P L +AG         + E +  A   V SR F +     FG   MVP AD+FNH  D ++V F S            G+++                          EM+ V+ V  G E++ + G + N  L+  +GF   DN +D V I  A VT  C  MF
Sbjct:   85 LAVMYERVRGSESPWDAYLRLLPDRESVPLVWPADETEHLLAGTELDKIV---KQDREFLCEDWKECIEP-LMSAGELDVDPDDFSLENYFSAKTLVSSRSFQIDSYHGFG---MVPLADLFNHKTDGEHVHFTSASDDSXXXXXXXGQSNASADDQSTVENSTSSPSGSRVNDEDLEMIVVKDVNEGEEVYNTYGTMGNAALLHRYGFTELDNPYDIVNIDLALVTKWCTSMF 311          
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Match: A0A5D6XWK1_9STRA (SET domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWK1_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 4.170e-9
Identity = 62/183 (33.88%), Postives = 83/183 (45.36%), Query Frame = 2
Query:  893 LRLLHELGLGDASPFAPYLAVLPCAHRIPIQWTAEERALLRGTAAETLAAAGRLEKDF-----RVFEAVRALHPGLWAAGVCTAEAFARAVMWVRSRGFTVFGDPF----MVPCADMFNHDPDQQNVEFRSDGEAHFEMV--AVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVPI 1408
            L L+ E   GDAS FAPYLA+LP    +   W+ +E A L       +AAA R + +       VF A+ A HPG +     T E F  A   +++R    FG       +VP AD  NH       +F       F +   A      G E+F S GR  N  L+  +GF L+DN +D V I
Sbjct:   89 LFLVREQLKGDASFFAPYLAILPFPESVQ-DWSDDELAALHDR--RLVAAARRRQSEIDAAYDSVFAALDASHPGEFPRAQYTREKFVFAWKTIQAR---TFGRRLPWTALVPFADCLNHANVATKYDFDVARNGMFRLFPSAATAYAAGAEVFNSYGRRSNFHLLLDYGFALRDNEWDYVDI 265          
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Match: A0A7S4DKW8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKW8_HETAK)

HSP 1 Score: 67.8 bits (164), Expect = 7.640e-9
Identity = 67/239 (28.03%), Postives = 106/239 (44.35%), Query Frame = 2
Query: 1214 MFNHDPDQQNVEFRSDGEAH---------FEMVAVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVPIPTATVTAACERMFRRLAAAKTEAXXXXXXXXXXEAGMTTEATTADAVAVAAADAAATESWKRRIGMARGQGLLPAEGFVVSKYDLMPEDLVSLLQVLTMSDDPTLVYGAMLEVVADKMASYAIRKESVEVIVDDLYASDAYDVARALVREEHKVLQDLGAQLRRE 1903
            M NHDP +    F  + E +         F++VA R +    E+F S G L N  L++S+GF+L+DN FD V IP   V    E   ++    K               G TT++ + D           ++S  +   MA  +     +G+++SKY+ + EDLV+ +Q    + D   VY  +  V+  K ASYA  K + E        +DA  +   LV++E  VL     Q+  +
Sbjct:    1 MLNHDPHRAGATFLQEEEGNGDSDGTGEVFKLVATRPLVANEEIFRSFGPLSNAMLLESYGFILEDNVFDRVIIPRHMV----EHCLKQQEQTK------------QLVGKTTDSQSVDE----------SDSTTQVFHMANKKNT--GQGYILSKYNPVSEDLVADVQHHLDTVDLERVYQVVWNVLGAKEASYA--KANKETNCCASVGTDALQIVHWLVQQEKSVLHRARQQIEEQ 209          
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Match: B4FRT5_MAIZE (N-lysine methyltransferase n=9 Tax=Andropogoneae TaxID=147429 RepID=B4FRT5_MAIZE)

HSP 1 Score: 70.1 bits (170), Expect = 9.100e-9
Identity = 61/232 (26.29%), Postives = 96/232 (41.38%), Query Frame = 2
Query:  893 LRLLHELGLGDASPFAPYLAVLPCAHRIPIQWTA-EERALLRGTAAETLAAAGRLEKDFRVFEAVRALHPGLWAAGV------CTAEAFARAVMWVRSRGFTV--FGDPFMVPCADMFNHDPDQQNVEFRS-------DGEAH-------------------------------FEMVAVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVPIPTATVTAACERMF 1447
            + +++E   G  SP+  YL +LP    +P+ W A E   LL GT  + +    + +K+F   +    + P + +  +       + E +  A   V SR F +  +    MVP AD+FNH  D ++V F S       DGE                                  E++ VR V  G E++ + G + N  L+  +GF   DN +D V I  A VT  C  +F
Sbjct:   87 VAVMYERAQGADSPWDAYLQLLPDCESVPLVWPAGEAECLLAGTELDKIV---KQDKEFLCEDWKECIEPLMLSGELDVDPDDFSLEKYLSAKTLVSSRSFQIDSYHGSGMVPLADLFNHKTDCEHVHFTSASDASDSDGEXXXXXXSDASADDKPTTKNPTSSPPGSRANDEDLEIIIVRDVNEGEEVYNTYGTMGNAALLHRYGFTELDNQYDIVNIDLALVTKWCTSIF 315          
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Match: A0A2I0A2Y2_9ASPA (Pentatricopeptide repeat-containing protein n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0A2Y2_9ASPA)

HSP 1 Score: 70.1 bits (170), Expect = 1.500e-8
Identity = 66/230 (28.70%), Postives = 95/230 (41.30%), Query Frame = 2
Query:  893 LRLLHELGLGDASPFAPYLAVLPCAHRIPIQWTAEE-RALLRGTAAETLAAAGR--LEKDFRVF-EAVRALHPGLWAAGVCTAEAFARAVMWVRSRGFTV-----FGDPFMVPCADMFNHDPDQQNVEFR-------SDGEAHF-----------------------------EMVAVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVPIPTATVTAACERMF 1447
            + L++E  LG ASP+  YL +LP    +PI WT++E   LL GT         +  L +D++ + E +    P +      + E +  A   V SR F +     FG   MVP AD+FNH    ++V F        SD E  F                             EM+ VR +  G E+F + G + N  L+  +GF   DN +D V I    V   C   F
Sbjct:  558 VALMYERSLGTASPWHGYLQLLPLRECVPIIWTSDEVDELLVGTELHKTVKEDKRFLHEDWKHYIEPLILSGPLMIDPKSFSVEQYFAAKSLVSSRSFDIDDYHGFG---MVPLADLFNHKTGGEHVHFTLASPCSSSDDEGDFGVTDTSGDESSSMKYFDGISGYNSHPVTLEMIVVREIDPGAEVFNTYGTIGNAALLHRYGFTEPDNPYDIVNIDLELVMRWCFSKF 784          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5243.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8N7_9STRA6.240e-10140.15SET domain-containing protein n=1 Tax=Tribonema mi... [more]
D7FPV0_ECTSI1.700e-8344.60SET domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S3C6F6_9CHLO4.500e-1333.17Hypothetical protein (Fragment) n=3 Tax=Chloropico... [more]
A0A836CPE3_9STRA1.890e-1234.43Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
UPI0005C9A0277.500e-1029.13ribosomal lysine N-methyltransferase 3 n=2 Tax=Ros... [more]
A0A0A9SJ34_ARUDO2.950e-927.78N-lysine methyltransferase n=2 Tax=Arundo donax Ta... [more]
A0A5D6XWK1_9STRA4.170e-933.88SET domain-containing protein n=1 Tax=Pythium bras... [more]
A0A7S4DKW8_HETAK7.640e-928.03Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
B4FRT5_MAIZE9.100e-926.29N-lysine methyltransferase n=9 Tax=Andropogoneae T... [more]
A0A2I0A2Y2_9ASPA1.500e-828.70Pentatricopeptide repeat-containing protein n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5243contigP-wetherbeei_contig5243:123..3834 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FPV0
PFAMsRubis-subs-bind,SET
Model size2462
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K19199
KEGG ReactionR03875,R04866,R04867
KEGG Pathwayko00310,map00310
Hectar predicted targeting categoryother localisation
Exons5
Evalue2.49e-106
EggNOG OGsKOG1337@1|root,KOG1337@2759|Eukaryota
Ec32 ortholog descriptionSET domain protein
Ec32 orthologEc-18_001770.1
EC2.1.1.43
Descriptionpeptidyl-lysine monomethylation
Cds size1989
COG categoryI
BRITEko00000,ko00001,ko01000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5243.1.4prot_P-wetherbeei_contig5243.1.4Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5243 328..3566 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186785.4953785-UTR-P-wetherbeei_contig5243:122..3271683186785.4953785-UTR-P-wetherbeei_contig5243:122..327Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5243 123..327 +
1683186785.557106-UTR-P-wetherbeei_contig5243:3566..38341683186785.557106-UTR-P-wetherbeei_contig5243:3566..3834Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5243 3567..3834 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186785.5074267-CDS-P-wetherbeei_contig5243:327..5811683186785.5074267-CDS-P-wetherbeei_contig5243:327..581Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5243 328..581 +
1683186785.5174792-CDS-P-wetherbeei_contig5243:828..15461683186785.5174792-CDS-P-wetherbeei_contig5243:828..1546Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5243 829..1546 +
1683186785.5274546-CDS-P-wetherbeei_contig5243:1918..19811683186785.5274546-CDS-P-wetherbeei_contig5243:1918..1981Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5243 1919..1981 +
1683186785.537391-CDS-P-wetherbeei_contig5243:2225..26781683186785.537391-CDS-P-wetherbeei_contig5243:2225..2678Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5243 2226..2678 +
1683186785.5477576-CDS-P-wetherbeei_contig5243:3065..35661683186785.5477576-CDS-P-wetherbeei_contig5243:3065..3566Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5243 3066..3566 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5243.1.4

>prot_P-wetherbeei_contig5243.1.4 ID=prot_P-wetherbeei_contig5243.1.4|Name=mRNA_P-wetherbeei_contig5243.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=663bp
MPGAGKKAAAAAPEATTGGSSDGTDGGSGGGRGGGGGRPRSGSVTLAAPS
TRVVEDDVKECFLRWAKDDIGVELHPGISLFHAFREDYRGVIATRDIEAG
EVLVRIRQASCIGPAAEDATREEWTQAMTSAGVRSMTGPSFTDCGGPNGS
AAAAVAAAAAVPAADGSRAAGAAANGMPPAPGPADAAASVSPPKQPRSSE
AAAASAVSAASAGLAPPSSPHLTKACFTVLRLLHELGLGDASPFAPYLAV
LPCAHRIPIQWTAEERALLRGTAAETLAAAGRLEKDFRVFEAVRALHPGL
WAAGVCTAEAFARAVMWVRSRGFTVFGDPFMVPCADMFNHDPDQQNVEFR
SDGEAHFEMVAVRRVPRGGELFASVGRLPNCTLVDSFGFVLKDNAFDTVP
IPTATVTAACERMFRRLAAAKTEAAAAAAAAGGAEAGMTTEATTADAVAV
AAADAAATESWKRRIGMARGQGLLPAEGFVVSKYDLMPEDLVSLLQVLTM
SDDPTLVYGAMLEVVADKMASYAIRKESVEVIVDDLYASDAYDVARALVR
EEHKVLQDLGAQLRREILEGDEDDDDGGGGGGGSSGGSDGDGGENGVSGG
GAGGGRGGGDGGDGGEEADEEDLGSAAMAAAMNARGGQKRRGGGGGGSSS
GGARKKGKGSRR*
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mRNA from alignment at P-wetherbeei_contig5243:123..3834+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5243.1.4 ID=mRNA_P-wetherbeei_contig5243.1.4|Name=mRNA_P-wetherbeei_contig5243.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3712bp|location=Sequence derived from alignment at P-wetherbeei_contig5243:123..3834+ (Phaeothamnion wetherbeei SAG_119_79)
AAAACGATCCGACTCTTCTGTGTTGTAAAAGGAGCACCTGCCTTCTGGTT CAGTGTCTCTCCTGACAGTTTTCCGCCAACTCTTTTTTGGCATGGGCGGA TCGCCCATCTGATACTTGCCCGCTCCCACAGGCCGCCGCCGCCACCATTT CTACAGTCTACCACGACAAACAGGCGCGCTGCCGTCGACAGCGAAGATCA AAGCCATGCCTGGGGCAGGCAAGAAGGCGGCGGCCGCCGCTCCTGAGGCA ACAACCGGCGGCAGCAGCGATGGCACTGACGGCGGTAGCGGCGGCGGCAG AGGCGGCGGCGGCGGGCGGCCGCGCAGCGGGTCGGTGACGCTGGCGGCGC CGTCGACGCGAGTGGTAGAGGACGACGTCAAGGAGTGCTTCCTGCGGTGG GCGAAAGACGACATTGGCGTCGAGCTCCACCCGGGCATCAGCCTCTTCCA CGCCTTCAGGTGGTTTACCTGGTTTTCTTTCGAACGAACGGTCTCTGTCA TTTTTCTTGATTCCTGTCCCAATTCCTTCTTTTTCCCCTTGATTCTTGGG TTTTCCTCTCTTTATTGCTCTTTGGCATCCACAACTTTATCCCCTATGCA GCGTCGTTCTCTTTGTGCCGGCGTCTCTGCAAAAGGAAAACGCAAGAATG ACACACGGTGTCCTGCCTCCGCATGTCCTATGATCAATTGATGATTGTTT CTGCAGGGAAGACTACCGCGGCGTCATCGCGACGCGGGACATCGAGGCCG GCGAGGTGCTGGTGCGCATCCGCCAGGCGTCTTGCATCGGTCCGGCGGCA GAGGATGCGACGCGGGAGGAGTGGACACAGGCCATGACGTCGGCCGGCGT CCGGAGCATGACTGGCCCGTCCTTCACCGATTGCGGCGGCCCCAATGGTA GTGCTGCCGCTGCCGTCGCCGCCGCCGCCGCCGTCCCTGCTGCTGACGGC TCGCGTGCTGCAGGTGCCGCTGCGAACGGTATGCCACCTGCACCAGGACC GGCGGATGCGGCCGCTTCGGTGTCGCCGCCGAAGCAACCGCGGTCGTCAG AAGCAGCGGCAGCTTCGGCGGTTTCGGCGGCTTCAGCTGGTCTGGCGCCG CCGTCGTCGCCGCACCTGACCAAGGCGTGCTTCACCGTCCTGCGCCTCCT ACACGAACTGGGCCTCGGCGACGCCAGCCCCTTCGCCCCGTATCTCGCCG TGCTGCCGTGCGCACACCGCATCCCGATCCAGTGGACGGCCGAAGAGCGG GCGCTGCTCCGGGGCACTGCCGCAGAGACGCTGGCGGCCGCCGGCCGGCT CGAGAAGGACTTCCGGGTGTTCGAGGCGGTGCGGGCGCTGCACCCAGGGC TGTGGGCGGCGGGGGTGTGCACGGCGGAGGCGTTCGCGCGGGCGGTCATG TGGGTGCGGTCCCGGGGTTTCACTGTGAGTGTGATGGGATGGTAGATTGT GGCTTTGTTTCTTCTACGATTGGTGTTGTTATTCTAGCCGGAGCTGTGCT TCTTCGGCTGCCAGTGCTCTGCTGGGTGTTGTGCTTCTTCTGCGTTTGCG AGTCTCGAAGGGCTAGAGTTGTTGGTTGGTTTACTTCCTGTCCTTTTTTC AATGGAATTCTCTCTAAGTGGATAATATGCTGAGGATTCTTGTTGTTCAT GCGGTAAGCGTAATGGAAGCGATCGAGCACGATCTGGGTACCAAACTACT TTCCCTCCCGGAAGCGGCTGGCTGCTTTCATGTCAACACCCTTCGCTGAC CTGCTTGCTACTGGTGCCTGTCTATCGTGTGCCTGTTTGCTGGTAGGTCT TTGGCGACCCATTCATGGTCCCGTGCGCAGACATGTTCAACCACGATCCG GACCAGCAGGTGAGGTTGATATTGCAGCGGTTTTCATGGACTGGCGAGAC AGTCAACCAGCGGCCGGTTCGAAGCTGCTCTTTCAGGTTTTACGTCTGGG ATCATTATCAAGAGGGAATTTGCGGAATGCTTCCAACACGATGACTGCTG GTTTCTGCGTCAGCTGACGATACTGATTTCCGCTTTCATCTTTCAAACCT ATGCACCTTTCACTTTACCGTTCCTCCTTCTCCCTGCCCGGCATGCCTCG CAGAACGTGGAATTCCGCAGCGACGGCGAGGCGCACTTTGAGATGGTGGC GGTGCGGCGCGTGCCCCGCGGCGGCGAGCTCTTCGCATCAGTCGGCCGCC TCCCCAACTGCACCCTCGTCGACTCTTTCGGCTTCGTCCTGAAGGACAAC GCCTTCGACACGGTGCCCATCCCGACCGCCACCGTGACGGCGGCCTGCGA GCGCATGTTCCGCCGGCTCGCCGCGGCCAAGACCGAGGCGGCGGCGGCGG CGGCGGCAGCGGGGGGCGCGGAGGCGGGCATGACGACTGAGGCGACAACT GCCGATGCTGTGGCGGTGGCGGCTGCGGACGCTGCGGCAACGGAATCGTG GAAGCGGCGGATCGGCATGGCCCGCGGGCAGGGGCTGCTGCCGGCGGAGG GCTTCGTGGTGAGCAAGTATGACCTCATGCCCGAAGATCTCGTCTCCCTG CTGCAGGTGAGAGAAGGAGAGAGGGGAGAAATGGGGCGGGGACTAGTGGG ACTGCTTCTGGTGTTTCGGAGTCTGCTTTGTCTCAGAAGGGTAGCTGCAG GGAAGAGCAGGCCTGAGTCGGCTGTGTCTCGGTGTCTCTGTCTCCTTCCC GGAAGATTCCGACCTCTTTTCATGTTGCCAGGCTGGGTCGTGGAGTCAGT TTTTGTGTGTTCACGTTGCTTTGTCCTTTGTTAAGGTCGAGGTTGCTGCC GCTGGTGCTTGGAAAAGACACCGGCTGTGCTCAACGCCGGCAACCGCGTT CCGTGTACCTGTTTCAGCCTTTGTTTTGTCATTGGTCCTTCTCTGCTGAG TTCTCCCGTCTGCCTCGCGGCGTCCGATTCACTATCCTGGCAGGTTTTGA CGATGAGCGACGACCCGACGCTCGTCTACGGGGCAATGTTGGAGGTGGTA GCGGACAAGATGGCGTCCTATGCCATCCGCAAGGAATCCGTAGAGGTTAT TGTGGACGACCTGTATGCCTCCGACGCGTACGATGTGGCCCGGGCGCTGG TGCGGGAGGAACACAAGGTGCTGCAGGATCTGGGGGCGCAGCTGCGGCGG GAGATTTTGGAGGGCGACGAGGACGATGACGATGGAGGCGGCGGCGGCGG CGGCAGCAGCGGTGGCAGCGACGGCGATGGCGGCGAGAATGGAGTCAGCG GCGGCGGTGCGGGCGGCGGTCGCGGTGGCGGCGATGGTGGCGACGGCGGT GAGGAGGCGGATGAAGAAGATCTGGGCTCGGCGGCCATGGCCGCGGCAAT GAATGCACGCGGAGGCCAGAAACGACGCGGAGGCGGCGGCGGCGGCAGCA GCTCTGGCGGGGCAAGAAAGAAAGGAAAGGGCAGCCGACGATAGTAAAAT CCCGTCTTTTATTGTCCTCTGTTTCCTGCCGCTCCCACCACACGCTGAGT AGCTTGTGCGCGGAGGTAGAGAACAGAGGTGGGGAGGCTGTGGTGGAGTG GAAAAGCCGCCGTTGCAAGTGTTCCTTATTGTGGCGGCATTCTGGCGCTC TCGCTCCTGGCTAGGGGTTGCTGTATATGCAGCATCCAGAGGGGTCGCTG GCTAAAGAGCCTTTCACTTGGAAACCTTACTTCTGTTGGTGACGGGTTGC TTGTGATTTTCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5243:123..3834+

>mRNA_P-wetherbeei_contig5243.1.4 ID=mRNA_P-wetherbeei_contig5243.1.4|Name=mRNA_P-wetherbeei_contig5243.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1989bp|location=Sequence derived from alignment at P-wetherbeei_contig5243:123..3834+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCTGGGGCAGGCAAGAAGGCGGCGGCCGCCGCTCCTGAGGCAACAAC
CGGCGGCAGCAGCGATGGCACTGACGGCGGTAGCGGCGGCGGCAGAGGCG
GCGGCGGCGGGCGGCCGCGCAGCGGGTCGGTGACGCTGGCGGCGCCGTCG
ACGCGAGTGGTAGAGGACGACGTCAAGGAGTGCTTCCTGCGGTGGGCGAA
AGACGACATTGGCGTCGAGCTCCACCCGGGCATCAGCCTCTTCCACGCCT
TCAGGGAAGACTACCGCGGCGTCATCGCGACGCGGGACATCGAGGCCGGC
GAGGTGCTGGTGCGCATCCGCCAGGCGTCTTGCATCGGTCCGGCGGCAGA
GGATGCGACGCGGGAGGAGTGGACACAGGCCATGACGTCGGCCGGCGTCC
GGAGCATGACTGGCCCGTCCTTCACCGATTGCGGCGGCCCCAATGGTAGT
GCTGCCGCTGCCGTCGCCGCCGCCGCCGCCGTCCCTGCTGCTGACGGCTC
GCGTGCTGCAGGTGCCGCTGCGAACGGTATGCCACCTGCACCAGGACCGG
CGGATGCGGCCGCTTCGGTGTCGCCGCCGAAGCAACCGCGGTCGTCAGAA
GCAGCGGCAGCTTCGGCGGTTTCGGCGGCTTCAGCTGGTCTGGCGCCGCC
GTCGTCGCCGCACCTGACCAAGGCGTGCTTCACCGTCCTGCGCCTCCTAC
ACGAACTGGGCCTCGGCGACGCCAGCCCCTTCGCCCCGTATCTCGCCGTG
CTGCCGTGCGCACACCGCATCCCGATCCAGTGGACGGCCGAAGAGCGGGC
GCTGCTCCGGGGCACTGCCGCAGAGACGCTGGCGGCCGCCGGCCGGCTCG
AGAAGGACTTCCGGGTGTTCGAGGCGGTGCGGGCGCTGCACCCAGGGCTG
TGGGCGGCGGGGGTGTGCACGGCGGAGGCGTTCGCGCGGGCGGTCATGTG
GGTGCGGTCCCGGGGTTTCACTGTCTTTGGCGACCCATTCATGGTCCCGT
GCGCAGACATGTTCAACCACGATCCGGACCAGCAGAACGTGGAATTCCGC
AGCGACGGCGAGGCGCACTTTGAGATGGTGGCGGTGCGGCGCGTGCCCCG
CGGCGGCGAGCTCTTCGCATCAGTCGGCCGCCTCCCCAACTGCACCCTCG
TCGACTCTTTCGGCTTCGTCCTGAAGGACAACGCCTTCGACACGGTGCCC
ATCCCGACCGCCACCGTGACGGCGGCCTGCGAGCGCATGTTCCGCCGGCT
CGCCGCGGCCAAGACCGAGGCGGCGGCGGCGGCGGCGGCAGCGGGGGGCG
CGGAGGCGGGCATGACGACTGAGGCGACAACTGCCGATGCTGTGGCGGTG
GCGGCTGCGGACGCTGCGGCAACGGAATCGTGGAAGCGGCGGATCGGCAT
GGCCCGCGGGCAGGGGCTGCTGCCGGCGGAGGGCTTCGTGGTGAGCAAGT
ATGACCTCATGCCCGAAGATCTCGTCTCCCTGCTGCAGGTTTTGACGATG
AGCGACGACCCGACGCTCGTCTACGGGGCAATGTTGGAGGTGGTAGCGGA
CAAGATGGCGTCCTATGCCATCCGCAAGGAATCCGTAGAGGTTATTGTGG
ACGACCTGTATGCCTCCGACGCGTACGATGTGGCCCGGGCGCTGGTGCGG
GAGGAACACAAGGTGCTGCAGGATCTGGGGGCGCAGCTGCGGCGGGAGAT
TTTGGAGGGCGACGAGGACGATGACGATGGAGGCGGCGGCGGCGGCGGCA
GCAGCGGTGGCAGCGACGGCGATGGCGGCGAGAATGGAGTCAGCGGCGGC
GGTGCGGGCGGCGGTCGCGGTGGCGGCGATGGTGGCGACGGCGGTGAGGA
GGCGGATGAAGAAGATCTGGGCTCGGCGGCCATGGCCGCGGCAATGAATG
CACGCGGAGGCCAGAAACGACGCGGAGGCGGCGGCGGCGGCAGCAGCTCT
GGCGGGGCAAGAAAGAAAGGAAAGGGCAGCCGACGATAG
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