mRNA_P-wetherbeei_contig52386.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52386.1.1 vs. uniprot
Match: A0A1F4DG05_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4DG05_9PROT) HSP 1 Score: 85.5 bits (210), Expect = 1.620e-20 Identity = 39/59 (66.10%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 4 KLTVYGRTYCHLCDDMIAGLRTLQAGDRFELEVIDVDSDPLLEARYGELVPVLIGGDGE 180
+LT+Y R+YCHLCD+MIAGLR LQA +RFE E+IDVD DP E YGE VPVL G E
Sbjct: 8 RLTLYSRSYCHLCDEMIAGLRELQAANRFEFEIIDVDRDPAFEQLYGEKVPVLAYGGRE 66
BLAST of mRNA_P-wetherbeei_contig52386.1.1 vs. uniprot
Match: A0A1F3ZXF7_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F3ZXF7_9PROT) HSP 1 Score: 84.0 bits (206), Expect = 6.600e-20 Identity = 39/58 (67.24%), Postives = 42/58 (72.41%), Query Frame = 1
Query: 7 LTVYGRTYCHLCDDMIAGLRTLQAGDRFELEVIDVDSDPLLEARYGELVPVLIGGDGE 180
LTV+ YCHLCDDMI GLR LQ F V+DVD DPLLEARYGE VPVL+GG E
Sbjct: 9 LTVFAHPYCHLCDDMIEGLRRLQVTHPFAFAVVDVDDDPLLEARYGERVPVLVGGGRE 66
BLAST of mRNA_P-wetherbeei_contig52386.1.1 vs. uniprot
Match: A0A518U6W1_9PROT (Thioredoxin family protein n=1 Tax=Denitratisoma sp. DHT3 TaxID=1981880 RepID=A0A518U6W1_9PROT) HSP 1 Score: 82.4 bits (202), Expect = 2.620e-19 Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 7 LTVYGRTYCHLCDDMIAGLRTLQAGDRFELEVIDVDSDPLLEARYGELVPVLIGGDGE 180
LT+YGRTYCHLCDDM+A L+ L+ FE+ V+DVD+DP LEARY E VPVL GG E
Sbjct: 8 LTLYGRTYCHLCDDMLAALQPLRDQHPFEVRVVDVDADPALEARYDERVPVLEGGGRE 65
BLAST of mRNA_P-wetherbeei_contig52386.1.1 vs. uniprot
Match: A0A191ZY05_9RALS (Glutaredoxin n=4 Tax=Ralstonia TaxID=48736 RepID=A0A191ZY05_9RALS) HSP 1 Score: 82.0 bits (201), Expect = 4.480e-19 Identity = 37/57 (64.91%), Postives = 44/57 (77.19%), Query Frame = 1
Query: 1 IKLTVYGRTYCHLCDDMIAGLRTLQAGDRFELEVIDVDSDPLLEARYGELVPVLIGG 171
I+LT+YGRTYCHLCDDM L L+ F+L +DVDSDP LEAR+GELVPVL+ G
Sbjct: 2 IELTLYGRTYCHLCDDMKVALEPLRRDFSFQLHEVDVDSDPALEARFGELVPVLMAG 58
BLAST of mRNA_P-wetherbeei_contig52386.1.1 vs. uniprot
Match: A0A431LTG8_9RHOO (Glutaredoxin family protein n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A431LTG8_9RHOO) HSP 1 Score: 81.6 bits (200), Expect = 5.570e-19 Identity = 36/59 (61.02%), Postives = 46/59 (77.97%), Query Frame = 1
Query: 4 KLTVYGRTYCHLCDDMIAGLRTLQAGDRFELEVIDVDSDPLLEARYGELVPVLIGGDGE 180
+LT+Y RTYCHLCDDM+A L TL++ F + V+DVD+DP LEA+Y ELVPVL+ D E
Sbjct: 10 QLTLYSRTYCHLCDDMLAALETLRSEFSFTVAVVDVDADPALEAKYDELVPVLVAEDQE 68
BLAST of mRNA_P-wetherbeei_contig52386.1.1 vs. uniprot
Match: A0A3N5X5V2_9PROT (Glutaredoxin family protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5X5V2_9PROT) HSP 1 Score: 80.9 bits (198), Expect = 1.090e-18 Identity = 35/60 (58.33%), Postives = 48/60 (80.00%), Query Frame = 1
Query: 1 IKLTVYGRTYCHLCDDMIAGLRTLQAGDRFELEVIDVDSDPLLEARYGELVPVLIGGDGE 180
+ LT+Y R +CHLC++M+AGL+ LQA FELEV+D+D+ P LE R+GE+VPVL+ GD E
Sbjct: 7 LVLTLYSRAWCHLCEEMLAGLQELQARRPFELEVVDIDTRPALELRFGEIVPVLMHGDRE 66
BLAST of mRNA_P-wetherbeei_contig52386.1.1 vs. uniprot
Match: UPI000664A04E (glutaredoxin family protein n=1 Tax=Ralstonia insidiosa TaxID=190721 RepID=UPI000664A04E) HSP 1 Score: 80.9 bits (198), Expect = 1.280e-18 Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 1
Query: 1 IKLTVYGRTYCHLCDDMIAGLRTLQAGDRFELEVIDVDSDPLLEARYGELVPVLIGG 171
I+LT+YGR+YCHLCDDM L Q G F L +DVDSDP LEAR+GELVPVL+ G
Sbjct: 2 IELTLYGRSYCHLCDDMKVALEPFQRGFSFVLHEVDVDSDPALEARFGELVPVLMTG 58
BLAST of mRNA_P-wetherbeei_contig52386.1.1 vs. uniprot
Match: A0A3N5N8Q1_9PROT (Glutaredoxin family protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5N8Q1_9PROT) HSP 1 Score: 80.5 bits (197), Expect = 1.320e-18 Identity = 36/58 (62.07%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 1 IKLTVYGRTYCHLCDDMIAGLRTLQAGDRFELEVIDVDSDPLLEARYGELVPVLIGGD 174
++LT+YGR YCHLC+DM+A L + A FE++V+DVD DP LEARYGE VPVL GD
Sbjct: 1 MRLTLYGRGYCHLCEDMLAALEPIGARLGFEVDVVDVDRDPALEARYGERVPVLAHGD 58
BLAST of mRNA_P-wetherbeei_contig52386.1.1 vs. uniprot
Match: A0A401K0G7_9RALS (Thioredoxin family protein n=1 Tax=Ralstonia sp. SET104 TaxID=2448774 RepID=A0A401K0G7_9RALS) HSP 1 Score: 80.5 bits (197), Expect = 1.820e-18 Identity = 37/57 (64.91%), Postives = 44/57 (77.19%), Query Frame = 1
Query: 1 IKLTVYGRTYCHLCDDMIAGLRTLQAGDRFELEVIDVDSDPLLEARYGELVPVLIGG 171
I+LT+YGRTYCHLCDDM + L L+ G F L +DVDSDP LE R+GELVPVL+ G
Sbjct: 2 IELTLYGRTYCHLCDDMKSALEPLRRGFSFVLHEVDVDSDPALEDRFGELVPVLMTG 58
BLAST of mRNA_P-wetherbeei_contig52386.1.1 vs. uniprot
Match: A0A353HWJ7_9BURK (Thioredoxin family protein n=2 Tax=Massilia sp. TaxID=1882437 RepID=A0A353HWJ7_9BURK) HSP 1 Score: 79.7 bits (195), Expect = 3.210e-18 Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = 1
Query: 1 IKLTVYGRTYCHLCDDMIAGLRTL-QAGDRFELEVIDVDSDPLLEARYGELVPVLIG 168
++ T+Y R++CHLC+DM+A LR L Q G FE+EVIDVD+DP LEAR+ ELVPVL G
Sbjct: 1 MRFTLYSRSWCHLCEDMLAALRALEQPGQSFEIEVIDVDADPALEARFNELVPVLYG 57 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52386.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52386.1.1 >prot_P-wetherbeei_contig52386.1.1 ID=prot_P-wetherbeei_contig52386.1.1|Name=mRNA_P-wetherbeei_contig52386.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=60bp IKLTVYGRTYCHLCDDMIAGLRTLQAGDRFELEVIDVDSDPLLEARYGELback to top mRNA from alignment at P-wetherbeei_contig52386:3..182- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52386.1.1 ID=mRNA_P-wetherbeei_contig52386.1.1|Name=mRNA_P-wetherbeei_contig52386.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=180bp|location=Sequence derived from alignment at P-wetherbeei_contig52386:3..182- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52386:3..182- >mRNA_P-wetherbeei_contig52386.1.1 ID=mRNA_P-wetherbeei_contig52386.1.1|Name=mRNA_P-wetherbeei_contig52386.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=180bp|location=Sequence derived from alignment at P-wetherbeei_contig52386:3..182- (Phaeothamnion wetherbeei SAG_119_79)back to top |