mRNA_P-wetherbeei_contig52326.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52326.1.1 vs. uniprot
Match: UPI001C6334E9 (MFS transporter n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C6334E9) HSP 1 Score: 92.4 bits (228), Expect = 1.990e-20 Identity = 44/64 (68.75%), Postives = 51/64 (79.69%), Query Frame = 1
Query: 1 FGWGMMPIGTALGGVIVAVMEHVTDRETALRSPWVVSAALGLLLMLYAVPRLTTERMDRARAEA 192
FGWGMMPIGTALGG++V E + RE ALR+PW V+AA+GL L YAVPRLT+ERMD ARA A
Sbjct: 379 FGWGMMPIGTALGGLVVVAGEPLWGREAALRAPWFVAAAVGLALCAYAVPRLTSERMDSARAAA 442
BLAST of mRNA_P-wetherbeei_contig52326.1.1 vs. uniprot
Match: A0A7V9C7N5_9ACTN (MFS transporter n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9C7N5_9ACTN) HSP 1 Score: 84.3 bits (207), Expect = 7.320e-18 Identity = 40/66 (60.61%), Postives = 51/66 (77.27%), Query Frame = 1
Query: 1 FGWGMMPIGTALGGVIVAVMEHVTDRETALRSPWVVSAALGLLLMLYAVPRLTTERMDRARAEALA 198
FGWGMMP+G A+GG +V + E V DR+ ALR PW+V+AA L LM YAVPRLTT +++ ARAE +A
Sbjct: 219 FGWGMMPVGFAVGGALVWLGELVGDRQFALRLPWLVAAAAYLALMFYAVPRLTTAKVEAARAEGIA 284
BLAST of mRNA_P-wetherbeei_contig52326.1.1 vs. uniprot
Match: A0A7Y1Y9W8_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y1Y9W8_9ACTN) HSP 1 Score: 79.0 bits (193), Expect = 1.410e-17 Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 1
Query: 1 FGWGMMPIGTALGGVIVAVMEHVTDRETALRSPWVVSAALGLLLMLYAVPRLTTERMDRARAEALA 198
F WGMMPIG+A+GG +V E DRE +LR PW V+AA +LL+LYA P+LTTE+++ AR +A
Sbjct: 5 FAWGMMPIGSAIGGALVVGSELFFDRELSLRMPWFVAAAAYVLLLLYAAPKLTTEKIESARTAGVA 70
BLAST of mRNA_P-wetherbeei_contig52326.1.1 vs. uniprot
Match: A0A7W1LSE4_9ACTN (MFS transporter n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1LSE4_9ACTN) HSP 1 Score: 83.6 bits (205), Expect = 3.080e-17 Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 1
Query: 1 FGWGMMPIGTALGGVIVAVMEHVTDRETALRSPWVVSAALGLLLMLYAVPRLTTERMDRARAEALAR 201
FGWGM+PIG +GG++VAV + RETALR PW V+A LL++YA PRLT+ +D ARAEA AR
Sbjct: 364 FGWGMIPIGALIGGLVVAVTDGAASRETALRMPWFVAAGGLALLLVYAAPRLTSRAIDEARAEAAAR 430
BLAST of mRNA_P-wetherbeei_contig52326.1.1 vs. uniprot
Match: A0A7Y2IUS1_9ACTN (MFS transporter n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y2IUS1_9ACTN) HSP 1 Score: 83.6 bits (205), Expect = 3.160e-17 Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 1 FGWGMMPIGTALGGVIVAVMEHVTDRETALRSPWVVSAALGLLLMLYAVPRLTTERMDRARAEAL 195
FGWGMMPIG+ALGG+++ + E + DR LR P+ V A LLL LYA PRLTTE+M+ ARAE L
Sbjct: 399 FGWGMMPIGSALGGLVMVIGESIVDRPFGLRLPYFVVAGAQLLLFLYAAPRLTTEKMEAARAEGL 463
BLAST of mRNA_P-wetherbeei_contig52326.1.1 vs. uniprot
Match: A0A7Y1TSG6_9ACTN (MFS transporter n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y1TSG6_9ACTN) HSP 1 Score: 82.4 bits (202), Expect = 8.210e-17 Identity = 39/66 (59.09%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 1 FGWGMMPIGTALGGVIVAVMEHVTDRETALRSPWVVSAALGLLLMLYAVPRLTTERMDRARAEALA 198
FGWGMMPIG+ALGG+++ V E + DR LR P+ V A LLL LYA PRLTT++M+ ARAE +A
Sbjct: 404 FGWGMMPIGSALGGLVMVVGEAIWDRPIGLRLPYFVVAVSQLLLFLYAAPRLTTQKMEAARAEGIA 469
BLAST of mRNA_P-wetherbeei_contig52326.1.1 vs. uniprot
Match: A0A7Y2IJY6_9ACTN (MFS transporter n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y2IJY6_9ACTN) HSP 1 Score: 80.5 bits (197), Expect = 4.060e-16 Identity = 38/67 (56.72%), Postives = 49/67 (73.13%), Query Frame = 1
Query: 1 FGWGMMPIGTALGGVIVAVMEHVTDRETALRSPWVVSAALGLLLMLYAVPRLTTERMDRARAEALAR 201
FGWGM+PIG+A+GG IVA+ + R ALR P+ + +LL+ YA+PRLTTERMD ARAE +AR
Sbjct: 406 FGWGMIPIGSAIGGGIVALATPIVGRSMALRWPYFIVVVAYILLLFYALPRLTTERMDAARAEGVAR 472
BLAST of mRNA_P-wetherbeei_contig52326.1.1 vs. uniprot
Match: UPI000E340F0C (MFS transporter n=1 Tax=Desertimonas flava TaxID=2064846 RepID=UPI000E340F0C) HSP 1 Score: 79.3 bits (194), Expect = 1.010e-15 Identity = 39/66 (59.09%), Postives = 51/66 (77.27%), Query Frame = 1
Query: 1 FGWGMMPIGTALGGVIVAVMEHVTDRETALRSPWVVSAALGLLLML--YAVPRLTTERMDRARAEA 192
F WGM+PIGTA+GG+IV + E +T RETALR PW ++ G L++L YA+PRLTT ++RARAEA
Sbjct: 395 FAWGMIPIGTAVGGLIVVLTERLTSRETALRMPWWIAGG-GYLVLLGAYALPRLTTANIERARAEA 459
BLAST of mRNA_P-wetherbeei_contig52326.1.1 vs. uniprot
Match: A0A0R2PFC1_9ACTN (MFS transporter n=1 Tax=Actinobacteria bacterium BACL15 MAG-120619-bin91 TaxID=1655562 RepID=A0A0R2PFC1_9ACTN) HSP 1 Score: 78.6 bits (192), Expect = 1.800e-15 Identity = 33/66 (50.00%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 1 FGWGMMPIGTALGGVIVAVMEHVTDRETALRSPWVVSAALGLLLMLYAVPRLTTERMDRARAEALA 198
F WG +PIG GG +V ++E +T RE ALR+P+++ A LGLL+ ++A PRLTT +++ARAEA++
Sbjct: 370 FAWGSIPIGMFAGGAVVTLLESMTSREVALRAPYLLGAVLGLLIFIFAAPRLTTAALNKARAEAIS 435
BLAST of mRNA_P-wetherbeei_contig52326.1.1 vs. uniprot
Match: A0A6I3HDI4_9ACTN (MFS transporter n=4 Tax=root TaxID=1 RepID=A0A6I3HDI4_9ACTN) HSP 1 Score: 77.8 bits (190), Expect = 3.370e-15 Identity = 37/63 (58.73%), Postives = 45/63 (71.43%), Query Frame = 1
Query: 1 FGWGMMPIGTALGGVIVAVMEHVTDRETALRSPWVVSAALGLLLMLYAVPRLTTERMDRARAE 189
F WG +PIG LGG +VAVM H RE+ALRSP+ VSA LGLLL A PRLTT +++ AR +
Sbjct: 371 FAWGSIPIGMGLGGGLVAVMTHFVSRESALRSPYFVSAVLGLLLWAIAAPRLTTAKIEAARTQ 433 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52326.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52326.1.1 >prot_P-wetherbeei_contig52326.1.1 ID=prot_P-wetherbeei_contig52326.1.1|Name=mRNA_P-wetherbeei_contig52326.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=64bp MMPIGTALGGVIVAVMEHVTDRETALRSPWVVSAALGLLLMLYAVPRLTTback to top mRNA from alignment at P-wetherbeei_contig52326:2..205+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52326.1.1 ID=mRNA_P-wetherbeei_contig52326.1.1|Name=mRNA_P-wetherbeei_contig52326.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=204bp|location=Sequence derived from alignment at P-wetherbeei_contig52326:2..205+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52326:2..205+ >mRNA_P-wetherbeei_contig52326.1.1 ID=mRNA_P-wetherbeei_contig52326.1.1|Name=mRNA_P-wetherbeei_contig52326.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=192bp|location=Sequence derived from alignment at P-wetherbeei_contig52326:2..205+ (Phaeothamnion wetherbeei SAG_119_79)back to top |