mRNA_P-wetherbeei_contig52268.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Match: A0A3D4BA03_9BACT (Epimerase domain-containing protein (Fragment) n=2 Tax=FCB group TaxID=1783270 RepID=A0A3D4BA03_9BACT) HSP 1 Score: 89.0 bits (219), Expect = 7.970e-19 Identity = 60/150 (40.00%), Postives = 76/150 (50.67%), Query Frame = 1
Query: 1 VLVTGARGFLGRYLCRALVNAGAEVHALHRTQPELGSSLPGTISHY------ADVTRPDELKEAIGSLRPRIVYHLAASVNRDISRQAVHQSFAVNAVGTHNLLQILASHPPDVMLMASTAEVYGQEFPPFREDCKGRPESAYPSSKATA 432
VL+TGA GF+GR+LCRALV+ GA V+AL RT SS SH D+ D LK I ++HLAA D + + A N GT NLL L + + +AE YG PFRE +P SAY +SKA+A
Sbjct: 15 VLITGANGFIGRHLCRALVDEGARVYALRRTNAF--SSPSEWASHLDIEWIEVDLCDSDRLKSVIKDTAASHIFHLAAVTTVDRGFELAQRMIANNLQGTINLLHALEATSYTCFIHTGSAEEYGMATAPFRETAFPQPVSAYSASKASA 162
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Match: A0A3B9TCM3_9BACT (Epimerase domain-containing protein n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A3B9TCM3_9BACT) HSP 1 Score: 84.3 bits (207), Expect = 9.310e-17 Identity = 49/144 (34.03%), Postives = 73/144 (50.69%), Query Frame = 1
Query: 1 VLVTGARGFLGRYLCRALVNAGAEVHALHRTQPELGSSLPGTISHYADVTRPDELKEAIGSLRPRIVYHLAASVNRDISRQAVHQSFAVNAVGTHNLLQILASHPPDVMLMASTAEVYGQEFPPFREDCKGRPESAYPSSKATA 432
++VTG +G+LG +L +AL GA+V+ + + P D+T+ +EL I ++P IVYHLAAS+NR+ VN GT +LL+ L + ST+E+YG PF E+ P S Y +K A
Sbjct: 10 IVVTGGQGYLGSFLVKALQEKGADVYIISIEAEKSDRHFP------IDITKFEELNAVIQQIQPDIVYHLAASLNRNRDFSIFENMLKVNVTGTFHLLKSLEQTQCQQFIFTSTSEIYGNNASPFHEELLPMPVSPYSLTKVMA 147
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Match: A0A1M5J7Y5_9FLAO (UDP-glucose 4-epimerase n=1 Tax=Muricauda flava TaxID=570519 RepID=A0A1M5J7Y5_9FLAO) HSP 1 Score: 83.2 bits (204), Expect = 2.660e-16 Identity = 56/147 (38.10%), Postives = 74/147 (50.34%), Query Frame = 1
Query: 1 VLVTGARGFLGRYLCRALVNAGA-EVHALHRTQPELGSSLPGTISHYADVTRPDELKEAIGSLRPRIVYHLAASVNRDISRQAVHQSFAVNAVGTHNLLQILASHPPDVMLMASTAEVYGQE--FPPFREDCKGRPESAYPSSKATA 432
VLVTG G+LGR L L+ G EVH++ + S P H A++ L + I ++P ++YHLAA++NR V Q VN GT NLL L D + ST+EVYG + PPF+E P S Y SK A
Sbjct: 12 VLVTGGAGYLGRNLISELIRLGCKEVHSIDLQNTQENS--PNITFHQANLLDASSLSDLIEKIKPTLIYHLAANLNRSRDFSNVKQLMDVNFTGTVNLLTALEDISYDNFVYTSTSEVYGGKSMIPPFKETDDFTPASPYSMSKYCA 156
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Match: A0A8G0CN58_9HYPH (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Devosia salina TaxID=2860336 RepID=A0A8G0CN58_9HYPH) HSP 1 Score: 80.5 bits (197), Expect = 3.500e-15 Identity = 56/154 (36.36%), Postives = 76/154 (49.35%), Query Frame = 1
Query: 1 VLVTGARGFLGRYLCRALVNAGAEV-----------HALHRTQPELGSSLPGTISHYADVTRPDELKEAIGSLRPRIVYHLAASVNRDISRQAVHQSFAVNAVGTHNLLQILASHPPDVMLMASTAEVYG--QEFPPFREDCKGRPESAYPSSK 423
VLVTGA GF+G +LCRAL+ AG V AL +T+ +L + G D+T P L + + + V+HLAA S +A N VGT NLL+ L HPP+ ++ AST+ VYG P D P S Y ++K
Sbjct: 3 VLVTGAAGFIGFHLCRALLAAGHSVVGLDALTNYYDPALKQTRLDLLMPMRGFSFGRVDLTDPAALGAFVAAAQAETVFHLAAQPGVRYSIEAPQSYIQSNVVGTANLLEALRQHPPEHLIFASTSSVYGGNSRLPYAETDRADSPLSLYAATK 156
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Match: A0A1F7HGV2_9BACT (Epimerase domain-containing protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_FULL_33_9 TaxID=1802045 RepID=A0A1F7HGV2_9BACT) HSP 1 Score: 80.1 bits (196), Expect = 3.640e-15 Identity = 48/145 (33.10%), Postives = 75/145 (51.72%), Query Frame = 1
Query: 1 VLVTGARGFLGRYLCRALVNAGAEVHALHRTQPELGSSLPGTISHY-ADVTRPDELKEAIGSLRPRIVYHLAASVNRDISRQAVHQSFAVNAVGTHNLLQILASHPPDVMLMASTAEVYGQEFPPFREDCKGRPESAYPSSKATA 432
+LVTGA GFLG+ L +AL A+++A + + + Y AD P+++++ I ++P I+YH+ VN +N +GT N+L+ L +PP + ST EVYG P++E + P S Y SKA A
Sbjct: 5 ILVTGATGFLGKNLVKALRREKADIYATSMHEDK-------NLKVYGADFLFPEKVRKTIDKVKPAIIYHIGGLVNLARDYGVYKNCLEINTIGTLNILEALRPNPPKKFIFISTEEVYGGNKIPYKETQEIDPPSGYSISKAAA 142
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Match: A0A2R3PWM9_STEMA (GDP-mannose 4,6 dehydratase n=2 Tax=Stenotrophomonas maltophilia TaxID=40324 RepID=A0A2R3PWM9_STEMA) HSP 1 Score: 79.7 bits (195), Expect = 4.900e-15 Identity = 54/143 (37.76%), Postives = 76/143 (53.15%), Query Frame = 1
Query: 1 VLVTGARGFLGRYLCRALVNAGAEVHALHRTQPELGSSLPGTISHYADVTRPDELKEAIGSLRPRIVYHLAASVNRDISRQAVHQSFAVNAVGTHNLLQILASHP--PDVMLMASTAEVYGQEFPPFREDCKGRPESAYPSSK 423
VL+TGA GF GRYL + L +AG ++ L GS P + D+ L+EA+ L+P +V HLAA ++ V + + VN VGT NLL+ LA P P +L+AS+A VYG E+ P++ Y SK
Sbjct: 12 VLITGASGFTGRYLVQELTDAGCKILTL-------GSHAPSGAATSVDLLDRKSLREALQDLQPELVVHLAAI--SFVAHGDVDEIYRVNVVGTRNLLEALADLPEVPSHVLLASSANVYGNVGGVLAEESPLSPQNDYAVSK 145
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Match: A0A7V5RA33_9DELT (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V5RA33_9DELT) HSP 1 Score: 77.0 bits (188), Expect = 6.200e-14 Identity = 60/159 (37.74%), Postives = 78/159 (49.06%), Query Frame = 1
Query: 1 VLVTGARGFLGRYLCRALVNAGAEVHALHRTQPELGSSLPGTISHY----ADVTRPDELKEAIGSLRPRIVYHLAA---------SVNRDIS--RQAVHQSFAVNAVGTHNLLQILASHPPDVMLMASTAEVYGQEFPPFREDCKGRPESAYPSSKATA 432
VLVTGA GF+G +L RA + AGAE AL R L S L G + AD+ L E + SLRP++++HLAA S++R ++ R A++ AV A GT L+ T E YG PF ED P S Y +SKA A
Sbjct: 16 VLVTGATGFIGSHLVRAALEAGAETAALARPGSSL-SRLSGVLDRVELVRADLLDRRTLTETVRSLRPQVIFHLAAVTDVSRGLASLDRSLADLRAAMNVVCAVEAAGTERLVH------------TGTCEEYGDNEAPFTEDQPPNPVSPYSASKAAA 161
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Match: UPI001FA98712 (GDP-mannose 4,6-dehydratase n=1 Tax=Pantoea sp. MQR6 TaxID=2907307 RepID=UPI001FA98712) HSP 1 Score: 76.6 bits (187), Expect = 6.650e-14 Identity = 54/145 (37.24%), Postives = 77/145 (53.10%), Query Frame = 1
Query: 4 LVTGARGFLGRYLCRALVNAGAEVHALHRTQPELGSSLPGTISHY--ADVTRPDELKEAIGSLRPRIVYHLAASVNRDISRQAVHQSFAVNAVGTHNLLQILASHP--PDVMLMASTAEVYGQEFP-PFREDCKGRPESAYPSSK 423
L+TG +GF GRY+ L AG EV+ L GS+ + +Y AD+T+ E+K AI + P +V HLAA + V+ + VN GT NLLQ+L+ P+ +L+AS+A VYG P E+ P + Y SK
Sbjct: 8 LITGIKGFTGRYMAAELSAAGYEVYGL-------GSTPANDLKNYYVADLTKISEVKAAIDLISPDVVIHLAAIAF--VGHDDVNAFYNVNICGTRNLLQVLSELEKLPEAVLLASSANVYGNTTPGKLSEESNVNPANDYAVSK 143
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Match: A0A7V5BDA6_9BACT (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A7V5BDA6_9BACT) HSP 1 Score: 76.3 bits (186), Expect = 9.130e-14 Identity = 48/144 (33.33%), Postives = 73/144 (50.69%), Query Frame = 1
Query: 1 VLVTGARGFLGRYLCRALVNAGAEVHALHRTQPELGSSLPGTISHYADVTRPDELKEAIGSLRPRIVYHLAASVNRDISRQAVHQSFAVNAVGTHNLLQILASHPPDVMLMASTAEVYGQEFPPFREDCKGRPESAYPSSKATA 432
+LVTG G+LGR+L L NA A+V+ + + + D+T D ++ AI ++P I++HLAAS+NR+ + ++ +N GT NLL L + + ST+EVYG PF E S Y +K A
Sbjct: 11 ILVTGGNGYLGRHLVERLRNAQADVYIMDKFGDASAKAF------ILDITDLDVVRTAIAKIQPDIIFHLAASLNRERNFDRFEETNNINLNGTKNLLFALQNTNYQHFIFTSTSEVYGSNMAPFVETQLADAASPYSLTKVFA 148
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Match: UPI001B39A93C (GDP-mannose 4,6-dehydratase n=1 Tax=Rhodanobacter sp. B2A1Ga4 TaxID=2778647 RepID=UPI001B39A93C) HSP 1 Score: 76.3 bits (186), Expect = 9.310e-14 Identity = 52/143 (36.36%), Postives = 75/143 (52.45%), Query Frame = 1
Query: 4 LVTGARGFLGRYLCRALVNAGAEVHALHRTQPELGSSLPGTISHYADVTRPDELKEAIGSLRPRIVYHLAASVNRDISRQAVHQSFAVNAVGTHNLLQILAS--HPPDVMLMASTAEVYGQE-FPPFREDCKGRPESAYPSSK 423
L+TG GF G Y+ R L AG EV L + + S+ AD+ + L +A+ S++P +V HLAA ++ V + + VN VGT NLL LA+ H P ++++AS+A VYG P ED P + Y SK
Sbjct: 7 LLTGRSGFTGHYVARELEQAGYEVVGLSNGEHDESGSIQ------ADLLDREALHQAVASVKPDVVLHLAAIAF--VAHGDVDEMYRVNVVGTRNLLDALAAAEHKPGLVVLASSANVYGNAGVEPITEDTPPAPANDYAVSK 141 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52268.1.1 >prot_P-wetherbeei_contig52268.1.1 ID=prot_P-wetherbeei_contig52268.1.1|Name=mRNA_P-wetherbeei_contig52268.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=144bp VLVTGARGFLGRYLCRALVNAGAEVHALHRTQPELGSSLPGTISHYADVTback to top mRNA from alignment at P-wetherbeei_contig52268:15..446- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52268.1.1 ID=mRNA_P-wetherbeei_contig52268.1.1|Name=mRNA_P-wetherbeei_contig52268.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig52268:15..446- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52268:15..446- >mRNA_P-wetherbeei_contig52268.1.1 ID=mRNA_P-wetherbeei_contig52268.1.1|Name=mRNA_P-wetherbeei_contig52268.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig52268:15..446- (Phaeothamnion wetherbeei SAG_119_79)back to top |