mRNA_P-wetherbeei_contig52257.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig52257.1.1
Unique NamemRNA_P-wetherbeei_contig52257.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig52257.1.1 vs. uniprot
Match: A0A7C4ZMS3_9PROT (DUF2147 domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7C4ZMS3_9PROT)

HSP 1 Score: 227 bits (579), Expect = 4.650e-70
Identity = 113/185 (61.08%), Postives = 140/185 (75.68%), Query Frame = 1
Query:    1 NTTTHHDMHHQHPHANFGLYFTWWDRLMGTEHPEYQARLADMAA---RGRGAGRLAPLAAKVAAVLLLTAAGAGLVAGKAEAG-RADIAGRWATQGFGSIVEFRPCAGAPDRMCGAILWLWEPNDAAGRRRTDGRNPDRALRSRPLVGVEIVRGLRETAPGVWSDGAVYNPDDGRTYTGTVKVRG 543
            NTTTHHD+HHQ+  +N+GLYFTWWDR MGTEHP+YQA +A  A    R +   R++   A +AA++L+     G +AG A A  R+ IAG WAT+GFGS+V F+PC GAP  MCG I+WLWE +D  GR RTD  NPDR+LR+R L+GVEIVRGLRETAP +WSDGA+YNPDDGRTYTG + +RG
Sbjct:  214 NTTTHHDLHHQNGRSNYGLYFTWWDRWMGTEHPDYQAEVAAFAICPLRRKKPARVSATTALLAALVLV----GGSMAGDAYAQTRSGIAGNWATRGFGSVVRFQPCEGAPQTMCGRIVWLWEASDDEGRPRTDRHNPDRSLRTRSLIGVEIVRGLRETAPNIWSDGALYNPDDGRTYTGQITLRG 394          
BLAST of mRNA_P-wetherbeei_contig52257.1.1 vs. uniprot
Match: A0A7C8LP40_9CAUL (Fatty acid hydroxylase n=1 Tax=Caulobacteraceae bacterium TaxID=1978230 RepID=A0A7C8LP40_9CAUL)

HSP 1 Score: 201 bits (511), Expect = 7.390e-60
Identity = 106/185 (57.30%), Postives = 127/185 (68.65%), Query Frame = 1
Query:    4 TTTHHDMHHQHPHANFGLYFTWWDRLMGTEHPEYQARLADMAARGRGAGRLAPLAAKVAAVLLLTAAGAGLVAGKAEAGRAD----IAGRWATQGFGSIVEFRPCAGAPDRMCGAILWLWEPNDAAGRRRTDGRNPDRALRSRPLVGVEIVRGLRETAPGVWSDGAVYNPDDGRTYTGTVKVRGG 546
            TTTHHD+HH     N+GLYFT+WDRLMGTEHPEY AR A   A  +            AA LL+   GA L+ G A   RA+    IAG WAT+GFGS+V F  C GAPD +CG I+WLWE  D   R R D RNPD ALR+R LVGVEI+RG+RET+PGVW+ G++YNPDDGRTYTG +++R G
Sbjct:  218 TTTHHDLHHAQAGWNYGLYFTFWDRLMGTEHPEYHARFAQ--AVRKPLXXXXXXXXXXAAALLV---GALLLGGAATDARAEATQSIAGDWATRGFGSLVRFSACQGAPDTLCGRIIWLWEIADERARPRNDRRNPDPALRNRSLVGVEIIRGMRETSPGVWTGGSLYNPDDGRTYTGEIRLRNG 397          
BLAST of mRNA_P-wetherbeei_contig52257.1.1 vs. uniprot
Match: UPI00083B9940 (DUF2147 domain-containing protein n=2 Tax=unclassified Phenylobacterium TaxID=2640670 RepID=UPI00083B9940)

HSP 1 Score: 161 bits (407), Expect = 1.480e-47
Identity = 78/120 (65.00%), Postives = 91/120 (75.83%), Query Frame = 1
Query:  187 LLLTAAGAGLVAGKAEAGRADIAGRWATQGFGSIVEFRPCAGAPDRMCGAILWLWEPNDAAGRRRTDGRNPDRALRSRPLVGVEIVRGLRETAPGVWSDGAVYNPDDGRTYTGTVKVRGG 546
            L L AA   L A  A   RADI GRWAT+GF SIVEFRPCA  P   CG I+WLW PN+  GR RTD RNPD  LRSRPL+GVE+V+GLR+TAPGVW+ G +YNPDDGRTY G+V+++GG
Sbjct:    4 LALLAAALVLAAPAAAQPRADIGGRWATEGFASIVEFRPCAADPQTQCGRIVWLWSPNER-GRPRTDARNPDAGLRSRPLLGVELVQGLRQTAPGVWTQGRLYNPDDGRTYGGSVRLKGG 122          
BLAST of mRNA_P-wetherbeei_contig52257.1.1 vs. uniprot
Match: A0A521RD03_9HYPH (DUF2147 domain-containing protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521RD03_9HYPH)

HSP 1 Score: 156 bits (395), Expect = 1.040e-42
Identity = 86/183 (46.99%), Postives = 115/183 (62.84%), Query Frame = 1
Query:    1 NTTTHHDMHHQHPHANFGLYFTWWDRLMGTEHPEYQAR---LADMAARGRGAGRLAPLAAKVAAVLLLTAAGAGLVAGKAEAGRADIA--GRWATQGFGSIVEFRPCAGAPDRMCGAILWLWEPNDAAGRRRTDGRNPDRALRSRPLVGVEIVRGLRETAPGVWSDGAVYNPDDGRTYTGTVK 534
            NTTTHHD+HH+    N+GLYF WWD+LMGTEHP+Y+ +   +   AA     GR A + A+  A +L     AG  A  A+  RAD    GRW T G  +IVE  PC+ AP  +CG + WLW+  D  GR R D +N D +LR+RP+VG+ I+ GL  T  GVW +G +YNP+DG+TY  T++
Sbjct:  216 NTTTHHDLHHEAGRYNYGLYFRWWDKLMGTEHPDYRRKFEAIVSPAAGSTARGRAARMLARALACIL-----AGGFALGADPVRADDGPVGRWVTPGAAAIVEIVPCSDAPG-LCGTVRWLWDSLDDKGRPRLDTQNGDASLRTRPVVGLSILSGLARTPGGVW-EGRIYNPEDGQTYRATLR 391          
BLAST of mRNA_P-wetherbeei_contig52257.1.1 vs. uniprot
Match: A0A562ZHH3_9BURK (DUF2147 domain-containing protein n=1 Tax=Caenimonas sp. HX-9-20 TaxID=2596921 RepID=A0A562ZHH3_9BURK)

HSP 1 Score: 157 bits (396), Expect = 1.100e-42
Identity = 85/188 (45.21%), Postives = 115/188 (61.17%), Query Frame = 1
Query:    4 TTTHHDMHHQHPHANFGLYFTWWDRLMGTEHPEYQARLADMAAR----GRGAGRLAP---LAAKVAAVLL-LTAAGAGLVAGKAEAGRADIAGRWATQGFGSIVEFRPCAGAPDRMCGAILWLWEPNDAAGRRRTDGRNPDRALRSRPLVGVEIVRGLRE-TAPGVWSDGAVYNPDDGRTYTGTVKVR 540
            TT HH+    H HAN+GLYFTWWDR   TEHP+Y  +L  +A R      GAG       +  K   VLL L  AG G +A   EA  + + G WATQG+ + V+ RPC  AP ++CGAI WLWEP D  G+   D ++PD + R +PL+G+E++ G +     G W+DG +YNP+DGRTY+  +K+R
Sbjct:  215 TTLHHEXXXAHGHANYGLYFTWWDRWCDTEHPQYGDQLWALAGRLHQPTAGAGPAQSPREVLGKTPTVLLALVVAGMGALA-TPEALASSVHGEWATQGYSARVDIRPCQAAPGKLCGAITWLWEPVDGQGKPILDAKHPDASRRGQPLLGMEMLSGFKPGLVAGSWADGQIYNPEDGRTYSARMKLR 401          
BLAST of mRNA_P-wetherbeei_contig52257.1.1 vs. uniprot
Match: A0A6N6ZNA8_9PROT (Sterol desaturase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A6N6ZNA8_9PROT)

HSP 1 Score: 154 bits (389), Expect = 6.830e-42
Identity = 82/178 (46.07%), Postives = 108/178 (60.67%), Query Frame = 1
Query:    1 NTTTHHDMHHQHPHANFGLYFTWWDRLMGTEHPEYQARLADMAARGRGAGRLAPLAAKVAAVLLLTAAGAGLVAGKAEAGRADIAGRWATQGFGSIVEFRPCAGAPDRMCGAILWLWEPNDAAGRRRTDGRNPDRALRSRPLVGVEIVRGLRETAPGVWSDGAVYNPDDGRTYTGTVK 534
            NTTTHHD+HH+    N+GLYF WWD++MGTEHP+Y+ +   + A        AP      A+  + A G  L A    A    + GRW T G  +IVE  PC+GAP  +CG + WLW+  D  GR R D RN D +LR RPL+G+ I+ GL  TA G W +G +YNP+DG+TY  TV+
Sbjct:  211 NTTTHHDLHHEAGRYNYGLYFRWWDKVMGTEHPDYRRKFEVIVAPAPAT--TAPHRVLARAITCVVAGGFLLSADPVHADDGPV-GRWVTPGAAAIVEIVPCSGAPG-LCGTVRWLWDGVDDKGRPRLDTRNADASLRPRPLIGLSILSGLARTANGGW-EGRIYNPEDGQTYRATVR 383          
BLAST of mRNA_P-wetherbeei_contig52257.1.1 vs. uniprot
Match: A0A1F3A0E5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 TaxID=1797225 RepID=A0A1F3A0E5_9PROT)

HSP 1 Score: 154 bits (389), Expect = 7.380e-42
Identity = 86/187 (45.99%), Postives = 113/187 (60.43%), Query Frame = 1
Query:    1 NTTTHHDMHHQHPHANFGLYFTWWDRLMGTEHPEYQARLA-----DMAARGR-GAGRLAPLAAKVAAVLLLTAAGAGLVAGKAEAGRADIAGRWATQGFGSIVEFRPCAGAPDRMCGAILWLWEPNDAAGRRRTDGRNPDRALRSRPLVGVEIVRGLRETAPGVWSDGAVYNPDDGRTYTGTVKVRG 543
            NTTTHHD+HH+    N+GLYF WWD+LMGTEHP+Y+ +        MAA    G GR     A   A+ +L  AG  ++AG+        AGRW T G  +IVE  PC+ A   +CG + WLW+  D  GR R D +N D  LR RPLVG+ I+ GL  T+ G W+ G +YNP+DG+TY  TV+ +G
Sbjct:  211 NTTTHHDLHHEAGRYNYGLYFRWWDKLMGTEHPDYRRKFEAIVTPQMAATSPLGTGR-----AITGALAVLVLAGGLIIAGEPVRADNSPAGRWLTPGAAAIVELAPCS-ATMSLCGTVRWLWDGIDDKGRPRLDTQNADATLRKRPLVGLPILSGLTATSDGSWT-GRIYNPEDGQTYRATVRRQG 390          
BLAST of mRNA_P-wetherbeei_contig52257.1.1 vs. uniprot
Match: A0A521PEE0_9CAUL (DUF2147 domain-containing protein n=1 Tax=Phenylobacterium sp. TaxID=1871053 RepID=A0A521PEE0_9CAUL)

HSP 1 Score: 145 bits (367), Expect = 1.420e-41
Identity = 71/109 (65.14%), Postives = 82/109 (75.23%), Query Frame = 1
Query:  220 AGKAEAGRADIAGRWATQGFGSIVEFRPCAGAPDRMCGAILWLWEPNDAAGRRRTDGRNPDRALRSRPLVGVEIVRGLRETAPGVWSDGAVYNPDDGRTYTGTVKVRGG 546
            A  AEA R+D+AGRWAT+GFGSIVE RPCA AP  MCG I+WLW P+   GR R D  NPD ALR+RPLVGVEI+RGLR    G W+ G +YNPDDGRTYTG V++  G
Sbjct:   10 AASAEA-RSDLAGRWATEGFGSIVEVRPCATAPAEMCGRIVWLWAPSPG-GRLRVDQHNPDPALRTRPLVGVEIIRGLRPAGAGAWTGGRLYNPDDGRTYTGAVRLGDG 116          
BLAST of mRNA_P-wetherbeei_contig52257.1.1 vs. uniprot
Match: UPI001C212FA7 (sterol desaturase family protein n=1 Tax=Reyranella sp. MMS21-HV4-11 TaxID=2849149 RepID=UPI001C212FA7)

HSP 1 Score: 153 bits (387), Expect = 1.450e-41
Identity = 86/188 (45.74%), Postives = 115/188 (61.17%), Query Frame = 1
Query:    1 NTTTHHDMHHQHPHANFGLYFTWWDRLMGTEHPEYQARLADMAARGRGAGRLAPLAAKVAAVLLLTAAGAGLVAGK-----AEAGRADI--AGRWATQGFGSIVEFRPCAGAPDRMCGAILWLWEPNDAAGRRRTDGRNPDRALRSRPLVGVEIVRGLRETAPGVWSDGAVYNPDDGRTYTGTVKVRG 543
            NTTTHHD+HH+    N+GLYF WWD+LMGTEHP+Y+ +   +A+    A    P  +   +V  LT    G+VAG      A+  RAD   AGRW T G  ++VE  PC G P  +CG + WLW+  D  GR R D +N D +LR+RPLVG+ I+ G   TA G W +G +YNP+DG+TY  T++  G
Sbjct:  211 NTTTHHDLHHEAGRYNYGLYFRWWDKLMGTEHPDYRRKFEAIAS----AATAGPTTST--SVHALTRTIMGIVAGSLFLLAADPVRADSGPAGRWMTPGAAAVVEITPCNGEPG-LCGTVRWLWDSVDDRGRPRLDTQNSDTSLRTRPLVGLSILSGFARTANGGW-EGRIYNPEDGQTYRATLRRMG 390          
BLAST of mRNA_P-wetherbeei_contig52257.1.1 vs. uniprot
Match: A0A521LZ72_9HYPH (DUF2147 domain-containing protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LZ72_9HYPH)

HSP 1 Score: 147 bits (372), Expect = 2.490e-39
Identity = 90/190 (47.37%), Postives = 115/190 (60.53%), Query Frame = 1
Query:    1 NTTTHHDMHHQHPHANFGLYFTWWDRLMGTEHPEYQARL-ADMAARGRG-----AGRLAPLAAKVAAVLLLTAAGAGLVAGKAEAGRADIA------GRWATQGFGSIVEFRPCAGAPDRMCGAILWLWEPNDAAGRRRTDGRNPDRALRSRPLVGVEIVRGLRETAPGVWSDGAVYNPDDGRTYTGTVK 534
            NTTTHHD+HH+    N+GLYF WWD+LMGTEHP+Y AR  A +A   +      AGR   L   VAA+LL   AG  +VA  AE  RA+        GRW T G  ++VE  PC      +CG I WLW+  D  GR R D +N D  LR+RPLVG+ I+ GL  ++ G W +G +YNP+DG+TY  TV+
Sbjct:  211 NTTTHHDLHHEAGRYNYGLYFRWWDKLMGTEHPDYCARFEAIIAPEAKTTSPAIAGRF--LVRTVAALLL---AGGLIVA--AEPVRANDGTSGGPVGRWVTPGASAVVELAPCTDTSG-LCGTIRWLWDATDDKGRPRLDAQNADTGLRARPLVGLSILSGLTRSSKGGW-EGRIYNPEDGQTYRATVR 391          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52257.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4ZMS3_9PROT4.650e-7061.08DUF2147 domain-containing protein n=1 Tax=Proteoba... [more]
A0A7C8LP40_9CAUL7.390e-6057.30Fatty acid hydroxylase n=1 Tax=Caulobacteraceae ba... [more]
UPI00083B99401.480e-4765.00DUF2147 domain-containing protein n=2 Tax=unclassi... [more]
A0A521RD03_9HYPH1.040e-4246.99DUF2147 domain-containing protein n=1 Tax=Reyranel... [more]
A0A562ZHH3_9BURK1.100e-4245.21DUF2147 domain-containing protein n=1 Tax=Caenimon... [more]
A0A6N6ZNA8_9PROT6.830e-4246.07Sterol desaturase n=1 Tax=Rhodospirillaceae bacter... [more]
A0A1F3A0E5_9PROT7.380e-4245.99Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A521PEE0_9CAUL1.420e-4165.14DUF2147 domain-containing protein n=1 Tax=Phenylob... [more]
UPI001C212FA71.450e-4145.74sterol desaturase family protein n=1 Tax=Reyranell... [more]
A0A521LZ72_9HYPH2.490e-3947.37DUF2147 domain-containing protein n=1 Tax=Reyranel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52257contigP-wetherbeei_contig52257:2..547 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog246200.SPO0619
PFAMsFA_hydroxylase
Model size546
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categorysignal anchor
Exons1
Evalue1.12e-19
EggNOG OGsCOG3000@1|root,COG4731@1|root,COG3000@2|Bacteria,COG4731@2|Bacteria,1RI5I@1224|Proteobacteria,2UAGB@28211|Alphaproteobacteria
DescriptionFatty acid hydroxylase superfamily
Cds size525
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186783.6815138-CDS-P-wetherbeei_contig52257:1..5261683186783.6815138-CDS-P-wetherbeei_contig52257:1..526Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig52257 2..526 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186783.6927335-UTR-P-wetherbeei_contig52257:526..5471683186783.6927335-UTR-P-wetherbeei_contig52257:526..547Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig52257 527..547 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52257.1.1prot_P-wetherbeei_contig52257.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig52257 2..526 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig52257.1.1

>prot_P-wetherbeei_contig52257.1.1 ID=prot_P-wetherbeei_contig52257.1.1|Name=mRNA_P-wetherbeei_contig52257.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=175bp
MHHQHPHANFGLYFTWWDRLMGTEHPEYQARLADMAARGRGAGRLAPLAA
KVAAVLLLTAAGAGLVAGKAEAGRADIAGRWATQGFGSIVEFRPCAGAPD
RMCGAILWLWEPNDAAGRRRTDGRNPDRALRSRPLVGVEIVRGLRETAPG
VWSDGAVYNPDDGRTYTGTVKVRGG
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mRNA from alignment at P-wetherbeei_contig52257:2..547-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig52257.1.1 ID=mRNA_P-wetherbeei_contig52257.1.1|Name=mRNA_P-wetherbeei_contig52257.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=546bp|location=Sequence derived from alignment at P-wetherbeei_contig52257:2..547- (Phaeothamnion wetherbeei SAG_119_79)
AACACCACGACGCACCACGACATGCACCACCAGCATCCGCACGCCAACTT CGGCCTCTACTTCACCTGGTGGGACCGGCTGATGGGGACCGAGCATCCGG AGTATCAGGCCCGCCTGGCCGACATGGCCGCCCGTGGTCGTGGCGCCGGC AGGCTCGCGCCGCTGGCCGCCAAGGTCGCCGCGGTGCTGCTGCTGACCGC CGCCGGCGCCGGGCTGGTCGCGGGCAAGGCGGAGGCCGGCCGCGCCGACA TCGCCGGCCGCTGGGCCACCCAGGGCTTCGGCTCGATCGTCGAGTTCCGG CCCTGCGCCGGGGCGCCGGACCGCATGTGCGGCGCCATCCTGTGGCTCTG GGAGCCCAACGACGCGGCGGGCCGGCGGCGGACGGACGGGCGCAACCCGG ATCGGGCGCTGCGCTCGCGGCCGCTGGTCGGCGTCGAGATCGTGCGCGGT CTGCGGGAAACAGCGCCCGGCGTCTGGAGCGACGGCGCGGTCTACAATCC CGACGACGGGCGCACCTACACCGGCACGGTCAAGGTCCGGGGCGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig52257:2..547-

>mRNA_P-wetherbeei_contig52257.1.1 ID=mRNA_P-wetherbeei_contig52257.1.1|Name=mRNA_P-wetherbeei_contig52257.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=525bp|location=Sequence derived from alignment at P-wetherbeei_contig52257:2..547- (Phaeothamnion wetherbeei SAG_119_79)
ATGCACCACCAGCATCCGCACGCCAACTTCGGCCTCTACTTCACCTGGTG
GGACCGGCTGATGGGGACCGAGCATCCGGAGTATCAGGCCCGCCTGGCCG
ACATGGCCGCCCGTGGTCGTGGCGCCGGCAGGCTCGCGCCGCTGGCCGCC
AAGGTCGCCGCGGTGCTGCTGCTGACCGCCGCCGGCGCCGGGCTGGTCGC
GGGCAAGGCGGAGGCCGGCCGCGCCGACATCGCCGGCCGCTGGGCCACCC
AGGGCTTCGGCTCGATCGTCGAGTTCCGGCCCTGCGCCGGGGCGCCGGAC
CGCATGTGCGGCGCCATCCTGTGGCTCTGGGAGCCCAACGACGCGGCGGG
CCGGCGGCGGACGGACGGGCGCAACCCGGATCGGGCGCTGCGCTCGCGGC
CGCTGGTCGGCGTCGAGATCGTGCGCGGTCTGCGGGAAACAGCGCCCGGC
GTCTGGAGCGACGGCGCGGTCTACAATCCCGACGACGGGCGCACCTACAC
CGGCACGGTCAAGGTCCGGGGCGGC
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