mRNA_P-wetherbeei_contig5218.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5218.2.1 vs. uniprot
Match: H3GMC6_PHYRM (CIA30 domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3GMC6_PHYRM) HSP 1 Score: 105 bits (263), Expect = 1.130e-22 Identity = 72/248 (29.03%), Postives = 121/248 (48.79%), Query Frame = 1
Query: 37 TSLFTMLRNVLMGLGGVPKLRPRIVLFDFAQPQGVGGWRVLADHDWGGKSEASVAWHQEVTAQPDYDDRDRGLMGTPQEADPRSFAAVGDEGDLAAPGSESVSGDGFAAGFLRFKGTTSLE---RAVGIKNAGFCATKSPYWRPSLNLEAFPVLAMRVRTEGRRLFTINVEPESFIPDDLYQGFLRTPPGRWVDVEMSFRNMVLTSRGRER-DEQRAFDSPQVLSLGLAVADGQQGPFQMDVAWIAAV 768
TS+ L + LG KL+P+ +F F V W +D GG SE +++ + A R V ++ ++ + F G S++ VG+ +G+CA ++ P L L + L MRV T+GR + +NV+ ES+ P +LY GF+RTPP WVD+++ FR+ +LT++G + D++ D ++ S+G A+AD ++G F++ + WI AV
Sbjct: 9 TSMNATLLSSKQSLGLQLKLQPQKDIFLFNAKDSVANWTASSDRSIGGLSECKWGFYK--------GEEQXXXXXXXXNASKRLIHKVNNQDNVPS---------------AVFTGRLSMDCQPTEVGVVRSGYCAVRASV-PPELLLHGYEGLTMRVMTDGRD-YRMNVQMESWNPFNLYMGFIRTPPNEWVDIDLPFRDFLLTAKGFVKLDDETELDPSKLKSVGFAIADQKEGDFELRIQWIKAV 231
BLAST of mRNA_P-wetherbeei_contig5218.2.1 vs. uniprot
Match: F0W2C2_9STRA (Uncharacterized protein AlNc14C9G1172 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2C2_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.520e-22 Identity = 50/136 (36.76%), Postives = 87/136 (63.97%), Query Frame = 1
Query: 406 VGIKNAGFCATKSPYWRPS-LNLEAFPVLAMRVRTEGRRLFTINVEPESFIPDDLYQGFLRTPPGRWVDVEMSFRNMVLTSRGRER-DEQRAFDSPQVLSLGLAVADGQQGPFQMDVAWIAAVLGKEHRPEEHKSL 807
G+ +G+CA ++P RP + L L MRV+T+GR +F +N++ E + P D++ GF+R PP +WVD+E+ F +++LTSRG + D+ ++L++G A++D ++GPF++ V WI A+ E +E + L
Sbjct: 60 AGVVRSGYCAVRAP--RPKEVQLFGSQGLQMRVKTDGR-IFRVNIQTEGWNPFDIHMGFIRAPPSKWVDIELPFSSLLLTSRGYVKMDDATVLYPSKLLNIGFAISDQEEGPFELRVQWIKAIADMEDACDERERL 192
BLAST of mRNA_P-wetherbeei_contig5218.2.1 vs. uniprot
Match: A0A067CNK6_SAPPC (CIA30 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CNK6_SAPPC) HSP 1 Score: 102 bits (253), Expect = 2.760e-21 Identity = 71/238 (29.83%), Postives = 109/238 (45.80%), Query Frame = 1
Query: 67 LMGLGGVPKLRPRIVLFDFAQPQGVGGWRVLADHDWGGKSEASVAWHQEVTAQPDYDDRDRGLMGTPQEADPRSFAAVGDEGDLAAPGSESVSGDGFAAGFLRFKGTTSLE---RAVGIKNAGFCATKSPYWRPSLNLEAFPVLAMRVRTEGRRLFTINVEPESFIPDDLYQGFLRTPPGRWVDVEMSFRNMVLTSRGRER-DEQRAFDSPQVLSLGLAVADGQQGPFQMDVAWIAAV 768
LMGL + P +F F + + GW V +D GG+S S F D+ D AP G F G SL + +G+CA + R L+L + LAMR++T+GR + IN + + + P DLY GFL+ P +WV+ E++F + +LTSRG + D+ D + ++G+A+AD ++GPFQ+ + WI AV
Sbjct: 24 LMGLR--LNVAPEAHVFRFDKAEATDGWLVSSDRAIGGESTCSF-----------------------------EFVPTADDSDKEAP----------KVGAAVFSGRLSLSVQPTEQHVVRSGYCAIRGNVPR-GLHLHGYEGLAMRIKTDGRT-YRINAQADGWNPHDLYMGFLKAPANKWVEAELAFSDFILTSRGYVQVDDPAKLDPSSLRTIGIALADDKEGPFQISIEWIKAV 218
BLAST of mRNA_P-wetherbeei_contig5218.2.1 vs. uniprot
Match: A0A2D4C318_PYTIN (CIA30 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C318_PYTIN) HSP 1 Score: 100 bits (249), Expect = 1.020e-20 Identity = 54/141 (38.30%), Postives = 84/141 (59.57%), Query Frame = 1
Query: 376 FKGTTSLE---RAVGIKNAGFCATKSPYWRPSLNLEAFPVLAMRVRTEGRRLFTINVEPESFIPDDLYQGFLRTPPGRWVDVEMSFRNMVLTSRGRER-DEQRAFDSPQVLSLGLAVADGQQGPFQMDVAWIAAVLGKEHR 786
F G SL VG+ +G+CA + R L L + L MRV T+GR + +N + + + P +LY GF+RTPP WVDVE+ FR+ +LT++G + D+ D ++ S+G+A+AD ++G F++ V WI A+ E R
Sbjct: 98 FSGRLSLACQPTEVGVVRSGYCAVRGSIPRDML-LHGYEGLTMRVMTDGRE-YRLNAQMDGWNPLNLYMGFIRTPPNEWVDVELPFRDFLLTTKGYYKYDDPTPLDPGKLRSIGIAIADQKEGDFEIRVQWIKAIAKVESR 236
BLAST of mRNA_P-wetherbeei_contig5218.2.1 vs. uniprot
Match: A0A0P1AZQ6_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZQ6_PLAHL) HSP 1 Score: 100 bits (248), Expect = 2.520e-20 Identity = 67/248 (27.02%), Postives = 118/248 (47.58%), Query Frame = 1
Query: 37 TSLFTMLRNVLMGLGGVPKLRPRIVLFDFAQPQGVGGWRVLADHDWGGKSEASVAWHQEVTAQPDYDDRDRGLMGTPQEADPRSFAAVGDEGDLAAPGSESVSGDGFAAGFLRFKGTTSLE---RAVGIKNAGFCATKSPYWRPSLNLEAFPVLAMRVRTEGRRLFTINVEPESFIPDDLYQGFLRTPPGRWVDVEMSFRNMVLTSRGRER-DEQRAFDSPQVLSLGLAVADGQQGPFQMDVAWIAAV 768
TS+ + N LG KL+P +F F + V W +D GG S+ ++ DD+ + + R +AV F G S++ G+ +G+CA ++ L L + ++MR+ T+GR + +N++ ES+ P +L+ GF+RTPP WVD+++ FRN +LT++G + ++ D ++ S+G A+AD ++G F++ + WI AV
Sbjct: 43 TSMNATILNSKQSLGIQLKLQPEKNIFLFDAKESVAEWTASSDKSIGGLSKCKWGFYTGEEPMKASDDKASKIFIQNVKKQDRIASAV-------------------------FTGNLSMDCQPTEAGVIRSGYCAVRAST-SSDLLLHGYEGISMRIMTDGRE-YRMNIQMESWNPFNLFIGFIRTPPNEWVDIDLPFRNFLLTAKGFVKITDETKLDPSKLKSIGFAIADQREGEFELRIQWIKAV 263
BLAST of mRNA_P-wetherbeei_contig5218.2.1 vs. uniprot
Match: A0A8K1FBC9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBC9_PYTOL) HSP 1 Score: 98.2 bits (243), Expect = 5.910e-20 Identity = 57/172 (33.14%), Postives = 95/172 (55.23%), Query Frame = 1
Query: 313 DLAAPGSESVSGDGFAAGFLRFKGTTSLE---RAVGIKNAGFCATKSPYWRPSLNLEAFPVLAMRVRTEGRRLFTINVEPESFIPDDLYQGFLRTPPGRWVDVEMSFRNMVLTSRGRER-DEQRAFDSPQVLSLGLAVADGQQGPFQMDVAWIAAVLGKEHRPEEHKSLMDL 816
D +AP + + D AA F G SL GI +G+CA + R L L + + MR+ T+GR + +N + + P +LY GF+RTPP +WVD+E+ FR+ +LT++G + D+ D + S+G+A+AD ++G F++ V WI A+ + R + + D+
Sbjct: 72 DESAPSALKIREDDEAAAV--FSGRVSLACQPTEAGIVRSGYCAVRGVLPRDML-LHGYEGITMRIMTDGRE-YRLNAQMVGWNPLNLYIGFIRTPPNQWVDIELPFRDFLLTAKGYYKFDDSTPLDPANLRSIGIAIADQKEGDFELRVQWIKAIAKVDSREVRDEDIPDI 239
BLAST of mRNA_P-wetherbeei_contig5218.2.1 vs. uniprot
Match: A0A1V9YAQ8_9STRA (CIA30 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAQ8_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 9.870e-20 Identity = 74/240 (30.83%), Postives = 115/240 (47.92%), Query Frame = 1
Query: 67 LMGLG-GVPKLRPRIVLFDFAQPQGVGGWRVLADHDWGGKSEASVAWHQEVTAQPDYDDRDRGLMGTPQEADPRSFAAVGDEGDLAAPGSESVSGDGFAAGFLRFKGTTSLE---RAVGIKNAGFCATKSPYWRPS-LNLEAFPVLAMRVRTEGRRLFTINVEPESFIPDDLYQGFLRTPPGRWVDVEMSFRNMVLTSRGRER-DEQRAFDSPQVLSLGLAVADGQQGPFQMDVAWIAAV 768
LMGL VP P +F F +P+ GW +D GG S S E P D +MG P++ AAV F G SL + +G+CA + PS L+L + LAMR++++GR ++ IN + + + P DLY GFL+ P WV+ E++F + +LTSRG + D+ + + ++G+A+AD ++GPF++ + WI AV
Sbjct: 24 LMGLSLNVP---PEAHVFHFGKPESTEGWLTSSDRAIGGSSTCSF----EFVPTP----ADSKVMGAPKDG-----AAV-------------------------FSGNLSLSVQPTEQHVVRSGYCAIRGNV--PSGLHLHGYQGLAMRIKSDGR-VYRINAQADGWNPHDLYMGFLKAPANEWVEAELAFSDFILTSRGYVQVDDPVKLNPASLRTIGIALADDKEGPFELCIEWIKAV 219
BLAST of mRNA_P-wetherbeei_contig5218.2.1 vs. uniprot
Match: A0A1V9YVR5_9STRA (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YVR5_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 4.410e-18 Identity = 68/225 (30.22%), Postives = 108/225 (48.00%), Query Frame = 1
Query: 112 LFDFAQPQGVGGWRVLADHDWGGKSEASVAW--HQEVTAQPDYDDRDRGLMGTPQEADPRSFAAVGDEGDLAAPGSESVSGDGFAAGFLRFKGTTSLE---RAVGIKNAGFCATKSPYWRPSLNLEAFPVLAMRVRTEGRRLFTINVEPESFIPDDLYQGFLRTPPGRWVDVEMSFRNMVLTSRGR-ERDEQRAFDSPQVLSLGLAVADGQQGPFQMDVAWIAAV 768
LF FA Q W V +D GG S S + H+E+ DD+D P++ AAV F G SL + +G+CA + + +L+L + LAMR++T+GR + IN + +S+ P DLY GFL+ P WV+ E++F + +LTSRG + ++ + + ++G+A+AD +GPF M + WI A+
Sbjct: 452 LFQFASAQATQEWLVSSDQAIGGSSTCSFEFVPHEEMK-----DDKDA----------PQAGAAV-------------------------FSGNLSLSIQPTEQYVVRSGYCAIRGNVPQ-NLHLHGYKGLAMRIKTDGRT-YRINAQADSWNPHDLYMGFLKAPANEWVEAELAFSDFILTSRGYVQMNDPTKLNPASLRTIGIALADDNEGPFSMAIEWIKAI 634
BLAST of mRNA_P-wetherbeei_contig5218.2.1 vs. uniprot
Match: A0A7S0FS06_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FS06_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 8.440e-16 Identity = 54/153 (35.29%), Postives = 89/153 (58.17%), Query Frame = 1
Query: 367 FLRFKGTTSLERAVGIKN----AGFCATKSPYWRPSLNLEA-FPVLAMRVRTEGRRLFTINVEPESFIPDDLYQGFLRTPP-------------GRWVDVEMSFRNMVLTSRGRERDEQRAFDSP-QVLSLGLAVADGQQGPFQMDVAWIAAV 768
F+R++GT L+ VG + +GFCA +SP + +NL+ + L + R++GR +T+N++ +F+PDDLYQG++ PP G +V + + F M+LTS+GR R+ QR D ++ ++G+ + D G FQ D+A I AV
Sbjct: 116 FIRWEGT--LDTRVGENSKATRSGFCAARSPEFPLPINLKNNYNALEIMCRSDGRT-YTVNLKISTFMPDDLYQGYITVPPTHKPGAAICERTGGEFVTLFVPFSTMILTSQGRMREVQRELDGLIKIENVGITLMDNVDGDFQFDLARIRAV 265
BLAST of mRNA_P-wetherbeei_contig5218.2.1 vs. uniprot
Match: A0A2R5GWU0_9STRA (Complex I intermediate-associated protein 30, mitochondrial n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWU0_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 2.230e-15 Identity = 49/129 (37.98%), Postives = 75/129 (58.14%), Query Frame = 1
Query: 376 FKGTTSLERAVGIKNAGFCATKSPYWRPSLNLEAFPVLAMRVRTEGRRLFTINVEPESFIPDDLYQGFL--RTPPGR--WVDVEMSFRNMVLTSRGRERDEQRAFDSPQVLSLGLAVADGQQGPFQMDV 750
F GT S G +GF A + +P ++ F L +RV+ + + + IN++PESFIPDDLYQGFL + P + WVD + FR+ +L RG + +QRAFD + +LG A D +G F++++
Sbjct: 69 FAGTLSKFVPKGTSRSGFAAVQMVTPKPLKDVTEFDALKLRVKLDHNK-YEINIKPESFIPDDLYQGFLMNESSPAKDGWVDAILPFRDFLLLGRGLVKQDQRAFDYNIMEALGFATND-YEGDFKIEI 195 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5218.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5218.2.1 >prot_P-wetherbeei_contig5218.2.1 ID=prot_P-wetherbeei_contig5218.2.1|Name=mRNA_P-wetherbeei_contig5218.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=256bp MLRNVLMGLGGVPKLRPRIVLFDFAQPQGVGGWRVLADHDWGGKSEASVAback to top mRNA from alignment at P-wetherbeei_contig5218:2268..3397+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5218.2.1 ID=mRNA_P-wetherbeei_contig5218.2.1|Name=mRNA_P-wetherbeei_contig5218.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1130bp|location=Sequence derived from alignment at P-wetherbeei_contig5218:2268..3397+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5218:2268..3397+ >mRNA_P-wetherbeei_contig5218.2.1 ID=mRNA_P-wetherbeei_contig5218.2.1|Name=mRNA_P-wetherbeei_contig5218.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig5218:2268..3397+ (Phaeothamnion wetherbeei SAG_119_79)back to top |