mRNA_P-wetherbeei_contig5217.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-wetherbeei_contig5217.2.1
Unique Name	mRNA_P-wetherbeei_contig5217.2.1
Type	mRNA
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)

Homology

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BLAST of mRNA_P-wetherbeei_contig5217.2.1 vs. uniprot
Match: D7G8X2_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X2_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 1.760e-77
Identity = 142/277 (51.26%), Postives = 181/277 (65.34%), Query Frame = 1

Query:    7 NDLAATVFSQGGKSTQYDRSLFQRLEACGHPVHMLNTQYRMHPRISAFPRAAFYDNKLLDGANVLQASYNKPYHRYCAFQPFVFLDLHSGAEQEKGMT-SLRNVGEAVLAVNIYTTLQRLCEAEQREXXXXXXXXXXXXXXXXLPXXXXLLXXXXRQVPGIKGQVGIITPYSQQVHELQEQFRRALGPGFRDEVEISTVDGFQGREKDVIIVSCVRASGSAGIGFLADVRRMNVALTRAKYGLYVIGESSTLRINRQWASLIQVAREADALLRIADP 834
            N L ATVFSQGGK +QYDRSLFQRLEA  HPV ML+ QYRMHP ISAFP A FYD KL DG NV   +Y++ +H +  FQPF+F DL +G +  +G   SL N  EA+LAVN+Y TL+R                                        GI G+VG+I+PY++Q+  L+E+F  +LG G+ ++VEISTVD FQGREKDVIIVS VRA+GS GIGFLADVRRMNVALTRA++GL+V+G +  L +N +W  L  +A   + L+++ DP
Sbjct:  522 NQLPATVFSQGGKLSQYDRSLFQRLEANDHPVQMLDVQYRMHPTISAFPSATFYDGKLKDGGNVSMPAYSRAFHTHPIFQPFMFFDLTTGEQTRRGGGGSLSNPMEAMLAVNVYVTLKRSFGGVGERGSGDEH--------------------------GIAGRVGVISPYAKQIKVLKEKFEESLGRGWHEQVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSAEALSVNPKWKELADLAESREGLVKVTDP 772

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BLAST of mRNA_P-wetherbeei_contig5217.2.1 vs. uniprot
Match: A0A6H5JH06_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH06_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 2.090e-76
Identity = 145/288 (50.35%), Postives = 185/288 (64.24%), Query Frame = 1

Query:    7 NDLAATVFSQGGKSTQYDRSLFQRLEACGHPVHMLNTQYRMHPRISAFPRAAFYDNKLLDGANVLQASYNKPYHRYCAFQPFVFLDLHSGAEQEKGMT-SLRNVGEAVLAVNIYTTLQRLCEAEQREXXXXXXXXXXXXXXXXLPXXXXLLXXXXRQVPGIKGQVGIITPYSQQVHELQEQFRRALGPGFRDEVEISTVDGFQGREKDVIIVSCVRASGSAGIGFLADVRRMNVALTRAKYGLYVIGESSTLRINRQWASLIQVAREADALLRIADPATDLLGLGKWS 867
            N L ATVFSQGGK +QYDRSLFQRLEA  HPV ML+ QYRMHP ISA   A FYD KL DG NV   +Y++ +H +  FQPF+F DL +G +  +G   SL N  EA+LAVN+Y TL+R                                        GI G+VG+I+PY++Q+  L+E+F  +LG G+ ++VEISTVD FQGREKDVIIVS VRA+GS GIGFLADVRRMNVALTRA++GL+V+G +  L +N +W  L  +A   + L+++ DP  DLL L  +S
Sbjct:  449 NQLPATVFSQGGKLSQYDRSLFQRLEANDHPVQMLDVQYRMHPTISA---ATFYDGKLKDGGNVTMPAYSRAFHTHPIFQPFMFFDLTTGEQTRRGGGGSLSNPMEAMLAVNVYVTLKRSFGGAGERGSGDEH--------------------------GIAGRVGVISPYAKQIKVLKEKFEESLGRGWHEQVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSAEALSVNPKWKELADLAERREGLVKVTDPRCDLLSLKPYS 707

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BLAST of mRNA_P-wetherbeei_contig5217.2.1 vs. uniprot
Match: W7TG92_9STRA (Helicase sen1 (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TG92_9STRA)

HSP 1 Score: 254 bits (650), Expect = 4.640e-75
Identity = 138/288 (47.92%), Postives = 178/288 (61.81%), Query Frame = 1

Query:   13 LAATVFSQGGKSTQYDRSLFQRLEACGHPVHMLNTQYRMHPRISAFPRAAFYDNKLLDGANVLQASYNKPYHRYCAFQPFVFLDLHS--GAEQEKGMT-----SLRNVGEAVLAVNIYTTLQRLCEAEQREXXXXXXXXXXXXXXXXLPXXXXLLXXXXRQVPGIKGQVGIITPYSQQVHELQEQFRRALGPGFRDEVEISTVDGFQGREKDVIIVSCVRASGSAGIGFLADVRRMNVALTRAKYGLYVIGESSTLRINRQWASLIQVAREADALLRIADPATDLLGL 855
            L ATVFS  G +T ++RSLF+RLE  GHPVH+L+TQYRMHP ISAFPR  FY   L DG NV   +Y++P+H + AFQPF FLDL S  G  ++KG       S RN  EA L VN+Y TL+R  + +                                   G++G+VG+ITPY  Q+ EL  QF RALGP +++EVE++TVDG QG+EKDVI+ SCVRA G  GIGFLADVRRMNV LTR +  + V+G + TL+ N  W +L+  AR   A +++  P  +LLGL
Sbjct:  386 LPATVFSSLGAATAFERSLFERLEHGGHPVHLLDTQYRMHPAISAFPRRYFYGKLLKDGENVFSPAYSRPWHAFPAFQPFAFLDLKSDGGRGRDKGREGGGGLSYRNSAEARLLVNVYQTLRREAKGQ-----------------------------------GVRGKVGVITPYQAQLMELHAQFARALGPSYQEEVELNTVDGCQGKEKDVILFSCVRAGGKRGIGFLADVRRMNVGLTRGRVAMLVVGRAETLQQNLHWKALLDHARTTGAFVKVPHPGCNLLGL 638

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BLAST of mRNA_P-wetherbeei_contig5217.2.1 vs. uniprot
Match: A0A4D9CTX5_9STRA (WW domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTX5_9STRA)

HSP 1 Score: 258 bits (659), Expect = 2.340e-74
Identity = 145/304 (47.70%), Postives = 186/304 (61.18%), Query Frame = 1

Query:   13 LAATVFSQGGKSTQYDRSLFQRLEACGHPVHMLNTQYRMHPRISAFPRAAFYDNKLLDGANVLQASYNKPYHRYCAFQPFVFLDLHS--GAEQEKGMT-----SLRNVGEAVLAVNIYTTLQRLCEAEQREXXXXXXXXXXXXXXXXLPXXXXLLXXXXRQVPGIKGQVGIITPYSQQVHELQEQFRRALGPGFRDEVEISTVDGFQGREKDVIIVSCVRASGSAGIGFLADVRRMNVALTRAKYGLYVIGESSTLRINRQWASLIQVAREADALLRIADPATDLLGLGKWSGTDGGGTSGGTG 903
            L ATVFS  G +T ++RSLF+RLE  GHPVH+L+TQYRMHP ISAFPR  FY   L DG NV   +Y++P+H + AFQPF FLDL S  G  ++KG       S RN  EA L VN+Y TL+R  + +                                   G++G+VG+ITPY  Q+ EL  QF RALGP +++EVE++TVDG QG+EKDVI+ SCVRA G  GIGFLADVRRMNV LTR +  + V+G + TL+ N  W +L+  AR   A +++  P  +LLGL +  G  GGG  GG G
Sbjct:  895 LPATVFSSLGAATAFERSLFERLEHGGHPVHLLDTQYRMHPAISAFPRRYFYGKLLKDGENVFSPAYSRPWHAFPAFQPFTFLDLKSDGGRGRDKGREGGGGLSYRNSAEARLLVNVYQTLRREAKGQ-----------------------------------GVRGKVGVITPYQAQLMELHAQFARALGPSYQEEVELNTVDGCQGKEKDVILFSCVRAGGKRGIGFLADVRRMNVGLTRGRVAMLVVGRAETLQQNLHWKALLDHARTTGAFVKVPHPGCNLLGLQRGGGK-GGGREGGCG 1162

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BLAST of mRNA_P-wetherbeei_contig5217.2.1 vs. uniprot
Match: K3X2C7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2C7_GLOUD)

HSP 1 Score: 252 bits (643), Expect = 5.730e-72
Identity = 136/282 (48.23%), Postives = 172/282 (60.99%), Query Frame = 1

Query:   13 LAATVFSQGGKSTQYDRSLFQRLEACGHPVHMLNTQYRMHPRISAFPRAAFYDNKLLDGANVLQASYNKPYHRY-CAFQPFVFLDLHSGAEQEKGMTSLRNVGEAVLAVNIYTTLQRLCEAEQREXXXXXXXXXXXXXXXXLPXXXXLLXXXXRQVPGIKGQVGIITPYSQQVHELQEQFRRALGPGFRDEVEISTVDGFQGREKDVIIVSCVRASGSAGIGFLADVRRMNVALTRAKYGLYVIGESSTLRINRQWASLIQVAREADALLRIADPATDLLGL 855
            L+ATVFS+    + Y+RSLF+R+E CGHPVHML TQYR HP IS FPR  FYD KL DG NV +  Y+KPYH    AF P  F +L S  E      S  NVGEA L+VN+Y TL+  C  +                                    I G+VG+ITPYSQQ+ EL+ +FRRALG  +  EVEI+TVDGFQGREKD+II+S VRA    G+GFL D+RRMNVALTRAK+  YVIG   TLR ++ WA+L+  + +   ++ + +P  +LL L
Sbjct: 1155 LSATVFSRTSGQSLYERSLFERIETCGHPVHMLRTQYRSHPMISDFPRNYFYDGKLQDGENVKKEGYDKPYHHLGAAFMPLTFWNLLSSRESSSRSVSRSNVGEAELSVNLYLTLKNSCPPD-----------------------------------AIAGKVGMITPYSQQMEELRNRFRRALGDRYDQEVEINTVDGFQGREKDIIILSTVRADPKGGVGFLNDIRRMNVALTRAKFACYVIGSEPTLRSSKPWAALLDHSYKKHCIVHVDNPKCNLLTL 1401

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BLAST of mRNA_P-wetherbeei_contig5217.2.1 vs. uniprot
Match: A0A3M6VH87_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VH87_9STRA)

HSP 1 Score: 252 bits (643), Expect = 5.870e-72
Identity = 137/282 (48.58%), Postives = 171/282 (60.64%), Query Frame = 1

Query:   13 LAATVFSQGGKSTQYDRSLFQRLEACGHPVHMLNTQYRMHPRISAFPRAAFYDNKLLDGANVLQASYNKPYHRY-CAFQPFVFLDLHSGAEQEKGMTSLRNVGEAVLAVNIYTTLQRLCEAEQREXXXXXXXXXXXXXXXXLPXXXXLLXXXXRQVPGIKGQVGIITPYSQQVHELQEQFRRALGPGFRDEVEISTVDGFQGREKDVIIVSCVRASGSAGIGFLADVRRMNVALTRAKYGLYVIGESSTLRINRQWASLIQVAREADALLRIADPATDLLGL 855
            L+ATVFS     + Y+RSLF+RLE+C HPVHML TQYR HP IS FPR  FYD KL DG NV   +Y KPYH    AF P VF +L S  E      S  NVGEA LAVN+Y TL+  C  +                                    I G+VG+ITPYSQQ+ EL+  FRRALG  +  EVEI+T+DGFQGREKD+II+S VRA   AG+GFL D+RRMNVALTRAK+  YVIG+ +TLR ++ W++L+    +   ++ +  P  +LL L
Sbjct: 1064 LSATVFSSNSGHSLYERSLFERLESCEHPVHMLRTQYRCHPMISEFPRNYFYDGKLQDGDNVKGGAYVKPYHNLGSAFMPLVFWNLLSSRENSTKSVSRMNVGEAELAVNLYLTLKNSCPPDS-----------------------------------ITGKVGMITPYSQQMEELRNHFRRALGKHYEQEVEINTIDGFQGREKDIIILSTVRADPKAGVGFLNDIRRMNVALTRAKFACYVIGKENTLRSSKPWSALLDHVYDKQCIVHVESPQCNLLTL 1310

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BLAST of mRNA_P-wetherbeei_contig5217.2.1 vs. uniprot
Match: A0A6A4FU24_9STRA (Helicase ATP-binding domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FU24_9STRA)

HSP 1 Score: 246 bits (629), Expect = 4.650e-70
Identity = 136/280 (48.57%), Postives = 171/280 (61.07%), Query Frame = 1

Query:   13 LAATVFSQGGKSTQYDRSLFQRLEACGHPVHMLNTQYRMHPRISAFPRAAFYDNKLLDGANVLQASYNKPYHRY-CAFQPFVFLDLHSGAEQEKGMTSLRNVGEAVLAVNIYTTLQRLCEAEQREXXXXXXXXXXXXXXXXLPXXXXLLXXXXRQVPGIKGQVGIITPYSQQVHELQEQFRRALGPGFRDEVEISTVDGFQGREKDVIIVSCVRASGSAGIGFLADVRRMNVALTRAKYGLYVIGESSTLRINRQWASLIQVAREADALLRIADPATDLL 849
            L+ATVFS+    + Y+RSLF+RLE+C HPVHML TQYR HP IS FPR  FYD KL DG NV   +Y KPYH    AF P VF +L S  E+     S  NVGEA LAVN+Y TL+  C  +                                    I G+VG+ITPYSQQ+ EL+ +FRRALG  +  EVEI+TVDGFQGREKD+II+S VRA   AG+GFL D+RRMNVALTRAK+  YVIG+ +TLR ++ W++L+  A     ++    P  + +
Sbjct: 1081 LSATVFSRNSGQSLYERSLFERLESCEHPVHMLRTQYRSHPMISDFPRNYFYDGKLQDGDNVKGDAYVKPYHSLGSAFMPLVFWNLLSSREKMTKSVSRTNVGEAELAVNLYLTLKNSCPPDS-----------------------------------IAGKVGMITPYSQQMEELRNRFRRALGERYEQEVEINTVDGFQGREKDIIILSTVRADPKAGVGFLNDIRRMNVALTRAKFACYVIGKENTLRSSKPWSALLDHAFNKHCIVHFVFPMRETM 1325

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BLAST of mRNA_P-wetherbeei_contig5217.2.1 vs. uniprot
Match: A0A0P1AHF0_PLAHL (Helicase partial n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AHF0_PLAHL)

HSP 1 Score: 246 bits (628), Expect = 6.270e-70
Identity = 134/282 (47.52%), Postives = 169/282 (59.93%), Query Frame = 1

Query:   13 LAATVFSQGGKSTQYDRSLFQRLEACGHPVHMLNTQYRMHPRISAFPRAAFYDNKLLDGANVLQASYNKPYHRY-CAFQPFVFLDLHSGAEQEKGMTSLRNVGEAVLAVNIYTTLQRLCEAEQREXXXXXXXXXXXXXXXXLPXXXXLLXXXXRQVPGIKGQVGIITPYSQQVHELQEQFRRALGPGFRDEVEISTVDGFQGREKDVIIVSCVRASGSAGIGFLADVRRMNVALTRAKYGLYVIGESSTLRINRQWASLIQVAREADALLRIADPATDLLGL 855
            L+ATVFS+    + Y+RSLF+RLE+C HPVHML TQYR HP IS FPR  FY+ KL DG NV    Y K YH    AF P VF +L S  E+     S  NVGEA LAVN+Y TL+  C  +                                    I G+VG+ITPYSQQ+ EL+ +FRR LG  +  EVEI+TVDGFQGREKD++I+S VRA   AG+GFL D+RRMNVALTRAK+  YVIG+  TLR +  W++L+        ++ + +P  +LL L
Sbjct:  967 LSATVFSRNSGQSLYERSLFERLESCEHPVHMLRTQYRSHPMISDFPRNYFYEGKLQDGENVKSVDYIKSYHSLGAAFMPLVFWNLLSSREKSTKSVSRMNVGEAELAVNLYLTLKNSCPPD-----------------------------------AIAGKVGVITPYSQQMEELRNRFRRTLGERYEQEVEINTVDGFQGREKDIVILSTVRADPKAGVGFLNDIRRMNVALTRAKFACYVIGKEDTLRSSEPWSALLDHTYNRHCVVHVQNPQCNLLTL 1213

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BLAST of mRNA_P-wetherbeei_contig5217.2.1 vs. uniprot
Match: A0A6A3NU69_9STRA (Helicase ATP-binding domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NU69_9STRA)

HSP 1 Score: 245 bits (625), Expect = 1.350e-69
Identity = 135/263 (51.33%), Postives = 166/263 (63.12%), Query Frame = 1

Query:   13 LAATVFSQGGKSTQYDRSLFQRLEACGHPVHMLNTQYRMHPRISAFPRAAFYDNKLLDGANVLQASYNKPYHRY-CAFQPFVFLDLHSGAEQEKGMTSLRNVGEAVLAVNIYTTLQRLCEAEQREXXXXXXXXXXXXXXXXLPXXXXLLXXXXRQVPGIKGQVGIITPYSQQVHELQEQFRRALGPGFRDEVEISTVDGFQGREKDVIIVSCVRASGSAGIGFLADVRRMNVALTRAKYGLYVIGESSTLRINRQWASLIQVA 798
            L+ATVFS+    + Y+RSLF+RLE+C HPVHML TQYR HP IS FPR  FYD KL DG NV   +Y KPYH    AF P VF +L S  E+     S  NVGEA LAVN+Y TL+  C  +                                    I G+VG+ITPYSQQ+ EL+ +FRRALG  +  EVEI+TVDGFQGREKD+II+S VRA   AG+GFL D+RRMNVALTRAK+  YVIG+ +TLR ++ W++L+  A
Sbjct: 1083 LSATVFSRNSGQSLYERSLFERLESCEHPVHMLRTQYRSHPMISDFPRNYFYDGKLQDGDNVKGDAYVKPYHSLGSAFMPLVFWNLLSSREKMTKSVSRMNVGEAELAVNLYLTLKNSCPPDS-----------------------------------IAGKVGMITPYSQQMEELRNRFRRALGERYEQEVEINTVDGFQGREKDIIILSTVRADPKAGVGFLNDIRRMNVALTRAKFACYVIGKENTLRSSKPWSALLDHA 1310

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BLAST of mRNA_P-wetherbeei_contig5217.2.1 vs. uniprot
Match: D0N7H3_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N7H3_PHYIT)

HSP 1 Score: 244 bits (624), Expect = 1.920e-69
Identity = 136/282 (48.23%), Postives = 170/282 (60.28%), Query Frame = 1

Query:   13 LAATVFSQGGKSTQYDRSLFQRLEACGHPVHMLNTQYRMHPRISAFPRAAFYDNKLLDGANVLQASYNKPYHRYC-AFQPFVFLDLHSGAEQEKGMTSLRNVGEAVLAVNIYTTLQRLCEAEQREXXXXXXXXXXXXXXXXLPXXXXLLXXXXRQVPGIKGQVGIITPYSQQVHELQEQFRRALGPGFRDEVEISTVDGFQGREKDVIIVSCVRASGSAGIGFLADVRRMNVALTRAKYGLYVIGESSTLRINRQWASLIQVAREADALLRIADPATDLLGL 855
            L+ATVFS+    + Y+RSLF+RLE+C HPVHML TQYR HP IS FPR  FY  KL DG NV    Y KPYH    AF P VF +L S  E+     S  NVGEA LAVN++ TL+  C                                       I G+VG+ITPYSQQ+ EL+ +FR ALG  +  EVEI+TVDGFQGREKD+II+S VRA   AG+GFL D+RRMNVALTRAK+  YVIG+ +TLR ++ W++L+  A     ++ +  P  +LL L
Sbjct:  940 LSATVFSRNSGQSLYERSLFERLESCEHPVHMLRTQYRSHPMISDFPRNYFYGGKLQDGDNVKGDEYAKPYHNLGPAFMPLVFWNLLSSREKATKSVSRMNVGEAELAVNLFLTLKNSCPPN-----------------------------------AISGKVGMITPYSQQMDELRNRFRHALGERYEQEVEINTVDGFQGREKDIIILSTVRADPKAGVGFLNDIRRMNVALTRAKFACYVIGKENTLRSSKPWSALLDHAYNHHCIVHVESPKCNLLTL 1186

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig5217.2.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig5217.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G8X2_ECTSI	1.760e-77	51.26	WW domain-containing protein n=1 Tax=Ectocarpus si...	[more]
A0A6H5JH06_9PHAE	2.090e-76	50.35	WW domain-containing protein n=1 Tax=Ectocarpus sp...	[more]
W7TG92_9STRA	4.640e-75	47.92	Helicase sen1 (Fragment) n=1 Tax=Nannochloropsis g...	[more]
A0A4D9CTX5_9STRA	2.340e-74	47.70	WW domain-containing protein n=1 Tax=Nannochlorops...	[more]
K3X2C7_GLOUD	5.730e-72	48.23	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A3M6VH87_9STRA	5.870e-72	48.58	Uncharacterized protein n=1 Tax=Peronospora effusa...	[more]
A0A6A4FU24_9STRA	4.650e-70	48.57	Helicase ATP-binding domain-containing protein n=6...	[more]
A0A0P1AHF0_PLAHL	6.270e-70	47.52	Helicase partial n=1 Tax=Plasmopara halstedii TaxI...	[more]
A0A6A3NU69_9STRA	1.350e-69	51.33	Helicase ATP-binding domain-containing protein n=3...	[more]
D0N7H3_PHYIT	1.920e-69	48.23	Uncharacterized protein n=2 Tax=Phytophthora infes...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig5217	contig	P-wetherbeei_contig5217:1845..3737 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	1
Seed ortholog	2880.D7G8X2
PFAMs	AAA_11,AAA_12
Model size	972
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K10706
Hectar predicted targeting category	other localisation
Exons	4
Evalue	2.89e-78
EggNOG OGs	COG1112@1\|root,KOG1801@2759\|Eukaryota
Ec32 ortholog description	P-loop containing nucleoside triphosphate hydrolase
Ec32 ortholog	Ec-15_004570.1
Description	positive regulation of termination of RNA polymerase II transcription, poly(A)-coupled
Cds size	972
COG category	L
BRITE	ko00000,ko01000,ko03021

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1683186782.465724-CDS-P-wetherbeei_contig5217:1844..2066	1683186782.465724-CDS-P-wetherbeei_contig5217:1844..2066	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig5217 1845..2066 -
1683186782.475454-CDS-P-wetherbeei_contig5217:2342..2810	1683186782.475454-CDS-P-wetherbeei_contig5217:2342..2810	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig5217 2343..2810 -
1683186782.4838772-CDS-P-wetherbeei_contig5217:3121..3248	1683186782.4838772-CDS-P-wetherbeei_contig5217:3121..3248	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig5217 3122..3248 -
1683186782.49257-CDS-P-wetherbeei_contig5217:3582..3737	1683186782.49257-CDS-P-wetherbeei_contig5217:3582..3737	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig5217 3583..3737 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig5217.2.1	prot_P-wetherbeei_contig5217.2.1	Phaeothamnion wetherbeei SAG_119_79	polypeptide	P-wetherbeei_contig5217 1845..3737 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-wetherbeei_contig5217:1845..3737-
coding sequence from alignment at P-wetherbeei_contig5217:1845..3737-

protein sequence of mRNA_P-wetherbeei_contig5217.2.1

>prot_P-wetherbeei_contig5217.2.1 ID=prot_P-wetherbeei_contig5217.2.1|Name=mRNA_P-wetherbeei_contig5217.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=324bp
MGNDLAATVFSQGGKSTQYDRSLFQRLEACGHPVHMLNTQYRMHPRISAF
PRAAFYDNKLLDGANVLQASYNKPYHRYCAFQPFVFLDLHSGAEQEKGMT
SLRNVGEAVLAVNIYTTLQRLCEAEQREQQEQQALQAQQDPQQPLPPPPP
LLPPPPRQVPGIKGQVGIITPYSQQVHELQEQFRRALGPGFRDEVEISTV
DGFQGREKDVIIVSCVRASGSAGIGFLADVRRMNVALTRAKYGLYVIGES
STLRINRQWASLIQVAREADALLRIADPATDLLGLGKWSGTDGGGTSGGT
GAGIVAAASGPVARNGASAEGAAR

mRNA from alignment at P-wetherbeei_contig5217:1845..3737-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-wetherbeei_contig5217.2.1 ID=mRNA_P-wetherbeei_contig5217.2.1|Name=mRNA_P-wetherbeei_contig5217.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1893bp|location=Sequence derived from alignment at P-wetherbeei_contig5217:1845..3737- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGGAACGACCTTGCAGCCACCGTCTTTTCGCAGGGCGGCAAGTCGAC
GCAGTACGACCGCTCGCTGTTCCAGCGGCTCGAAGCCTGCGGCCACCCGG
TGCACATGCTCAATACGCAGTACAGAATGCACCCCCGCATCTCGGCGTTC
CCCAGGTGAGAAAAGGGTCTGCCCGCGCATGTTATGCTGCCAGGAAATAA
GCGTTTCACCGTGGTGGGCGTTGGATTGGAGGCTGCTAATGAAGTCGTGC
TGCTTCTGCGGTCTGATATGTCATGGCGCGATAAGCAGCGGACGAAAATT
TATTGGCTGTCTGCGCGCCCTTTGTGGCAAACATTACCGAGGTTTTTGGA
GGGCTGACGCCTCTGGTCTTTGCAGTTGTGCAGTTTGGGTCGGACACTAC
GCATCTCTGTCGTTTCGGTCTGAGGTCATATTTCAAAAGCCTGGCACCCA
TTTCTGCCTTCCTTTTTTTGCTTCTTCTTGTCCTTTCAGGGCGGCCTTCT
ACGACAACAAGCTGCTGGACGGCGCCAATGTGCTGCAGGCAAGCTACAAC
AAGCCATACCACCGATACTGCGCCTTTCAGCCCTTCGTCTTCCTCGACCT
CCACTCCGGCGCCGAGGTGAGGACAGCCAGCTTCCAGCTGCCAGACGAGT
GGTGCTTTTTTGGTTTGTCGGGGCTCGAGCTTGCGACCCTAGCAGATGGG
AACACAGATCTCGAAAGATTCTTGAAACCTTCACTGACCTAAACAGGCGG
CAGTTGAAGCATTTGGTGCTGGTTATATTTTGCGGTGCACGCAAACAGTT
CTGTATTTTTTGGTTATAGACGGCGAGGGGAGCCTAGCCAGTCTACCTTG
TTGCAAACTGAGACGTTCTCCTCGTTCTCGACGGTCCCGCCTGCGACCTT
GCACTCGATGGCACGCGGCGGGCGGAGCAGGAGAAAGGCATGACCTCTCT
GCGCAACGTGGGCGAGGCGGTGCTGGCGGTGAACATATACACGACGCTCC
AGCGGCTCTGCGAGGCGGAGCAGCGCGAGCAGCAGGAGCAGCAAGCGCTG
CAGGCGCAGCAGGACCCGCAGCAGCCGCTGCCGCCGCCGCCCCCGCTGCT
GCCCCCGCCGCCGCGCCAGGTGCCGGGCATCAAGGGACAGGTGGGCATCA
TCACACCATACAGCCAGCAGGTGCACGAGCTGCAGGAGCAGTTCCGGCGG
GCTCTGGGGCCGGGCTTCCGTGATGAGGTGGAGATATCGACCGTCGACGG
CTTCCAGGGCCGCGAGAAGGACGTCATTATCGTCTCCTGCGTGCGCGCCT
CGGGCAGCGCCGGCATCGGCTTCCTCGCGGACGTGCGCCGCATGAATGTC
GCCCTCACGCGCGCCAAGTATGGCCTTTATGTCATTGGTGAGTCCGTCGT
CTGCCTTTGAAAACGCTTTGTTCGTTCTTGAATGTAGTCTCTCGCGGAGC
GGCGCAATATTCCTCTCTCTATGAGCGAAGTGTTCTTTATTGGCTGCCTC
CTCTATCACTGGTTTTAGGGTGCGGCGTCAGGCAGCATAAAGAGACTTTG
CTGGCTTGTTTACAAACTTTTACTAGGTTGGCCTCTCACATTTTTGACGT
TATGCCTCATCTCATTCCTTACTTTTCATCGCGCTCCGATGCAAATTTTC
CTCCCGACAACAGGCCGGGAGAGCACGCTCCGGATCAACCGCCAGTGGGC
CTCACTCATCCAAGTTGCCCGGGAGGCAGACGCCTTGCTGCGCATCGCGG
ACCCTGCCACAGACCTCCTCGGACTCGGGAAATGGAGCGGCACTGACGGC
GGCGGCACCAGCGGTGGCACAGGAGCGGGCATTGTTGCTGCAGCCTCAGG
ACCGGTGGCCAGGAACGGCGCGTCCGCCGAGGGAGCGGCAAGG

Coding sequence (CDS) from alignment at P-wetherbeei_contig5217:1845..3737-

>mRNA_P-wetherbeei_contig5217.2.1 ID=mRNA_P-wetherbeei_contig5217.2.1|Name=mRNA_P-wetherbeei_contig5217.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=972bp|location=Sequence derived from alignment at P-wetherbeei_contig5217:1845..3737- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGGAACGACCTTGCAGCCACCGTCTTTTCGCAGGGCGGCAAGTCGAC
GCAGTACGACCGCTCGCTGTTCCAGCGGCTCGAAGCCTGCGGCCACCCGG
TGCACATGCTCAATACGCAGTACAGAATGCACCCCCGCATCTCGGCGTTC
CCCAGGGCGGCCTTCTACGACAACAAGCTGCTGGACGGCGCCAATGTGCT
GCAGGCAAGCTACAACAAGCCATACCACCGATACTGCGCCTTTCAGCCCT
TCGTCTTCCTCGACCTCCACTCCGGCGCCGAGCAGGAGAAAGGCATGACC
TCTCTGCGCAACGTGGGCGAGGCGGTGCTGGCGGTGAACATATACACGAC
GCTCCAGCGGCTCTGCGAGGCGGAGCAGCGCGAGCAGCAGGAGCAGCAAG
CGCTGCAGGCGCAGCAGGACCCGCAGCAGCCGCTGCCGCCGCCGCCCCCG
CTGCTGCCCCCGCCGCCGCGCCAGGTGCCGGGCATCAAGGGACAGGTGGG
CATCATCACACCATACAGCCAGCAGGTGCACGAGCTGCAGGAGCAGTTCC
GGCGGGCTCTGGGGCCGGGCTTCCGTGATGAGGTGGAGATATCGACCGTC
GACGGCTTCCAGGGCCGCGAGAAGGACGTCATTATCGTCTCCTGCGTGCG
CGCCTCGGGCAGCGCCGGCATCGGCTTCCTCGCGGACGTGCGCCGCATGA
ATGTCGCCCTCACGCGCGCCAAGTATGGCCTTTATGTCATTGGTGAGTCC
AGCACGCTCCGGATCAACCGCCAGTGGGCCTCACTCATCCAAGTTGCCCG
GGAGGCAGACGCCTTGCTGCGCATCGCGGACCCTGCCACAGACCTCCTCG
GACTCGGGAAATGGAGCGGCACTGACGGCGGCGGCACCAGCGGTGGCACA
GGAGCGGGCATTGTTGCTGCAGCCTCAGGACCGGTGGCCAGGAACGGCGC
GTCCGCCGAGGGAGCGGCAAGG