mRNA_P-wetherbeei_contig52153.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig52153.1.1
Unique NamemRNA_P-wetherbeei_contig52153.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig52153.1.1 vs. uniprot
Match: UPI001C3D600D (6-phosphogluconolactonase n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3D600D)

HSP 1 Score: 199 bits (506), Expect = 3.830e-62
Identity = 97/130 (74.62%), Postives = 113/130 (86.92%), Query Frame = 1
Query:    1 LDPAEAARAAEEDLRSAVPGSPWPVLDLVILGMGPDGHTASLFPGAPELEEATRLMVPVHRPEMPQPWRVSMTMPVINAARAVLVLVGGIEKAPMVRRALAGDPSIPAGRVRPQ-GRLTWIVTRDAASEL 387
            L P EAAR AEEDLR++VPG PWPVLDLV+LGMG DGHTASLFPGAPEL+E  RLMVPVHRPE+PQPWRVSMT+PV+NAARAVLVLVG  EK PMVRRA+ GDP++PAGR+R   GR+TW++T + A+ L
Sbjct:  107 LPPEEAARLAEEDLRASVPGRPWPVLDLVVLGMGADGHTASLFPGAPELDEMRRLMVPVHRPELPQPWRVSMTLPVLNAARAVLVLVGAPEKGPMVRRAIEGDPTLPAGRLRADAGRVTWLLTEETAAAL 236          
BLAST of mRNA_P-wetherbeei_contig52153.1.1 vs. uniprot
Match: UPI001C3D9A91 (6-phosphogluconolactonase n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3D9A91)

HSP 1 Score: 187 bits (476), Expect = 1.490e-57
Identity = 93/130 (71.54%), Postives = 107/130 (82.31%), Query Frame = 1
Query:    1 LDPAEAARAAEEDLRSAVPGSPWPVLDLVILGMGPDGHTASLFPGAPELEEATRLMVPVHRPEMPQPWRVSMTMPVINAARAVLVLVGGIEKAPMVRRALAGDPSIPAGRVRPQ-GRLTWIVTRDAASEL 387
            L P E A  AEEDLR+ V GSPWPVLDLV+LGMG DGHTASLFPG PEL+E  RL VPVHRPEMPQPWRVS+T+PVINAAR +LV+VG  EKA MV RA+AGD  IPAGR+RP  G LTW++T +AA++L
Sbjct:  110 LPPPEGAARAEEDLRATVAGSPWPVLDLVLLGMGADGHTASLFPGGPELDETERLFVPVHRPEMPQPWRVSLTLPVINAARRILVVVGSAEKAAMVARAIAGDRDIPAGRLRPTAGSLTWLLTEEAAADL 239          
BLAST of mRNA_P-wetherbeei_contig52153.1.1 vs. uniprot
Match: A0A6J2HUX4_9PASS (6-phosphogluconolactonase n=3 Tax=Pipridae TaxID=114313 RepID=A0A6J2HUX4_9PASS)

HSP 1 Score: 122 bits (305), Expect = 1.200e-31
Identity = 67/136 (49.26%), Postives = 90/136 (66.18%), Query Frame = 1
Query:    1 LDPAEAARAAEEDLRSAVPGSPWPVLDLVILGMGPDGHTASLFPGAPELEEATRLMVPVHRPEMPQPWRVSMTMPVINAARAVLVLVGGIEKAPMVRRALAG--DPSIPAGRVRPQ-GRLTWIVTRDAASELASET 399
            L PA AAR   E LR A PG   PV DL++LG+GPDGHT SLFPG P L+E   ++  +     P   RV++T+PV+NAAR+VLV+  G  KAP+++R L G  +P +PA  VRP+ GRL W++   AA+EL+  T
Sbjct:  113 LGPAAAARDYGEQLRGAFPGQEVPVFDLLVLGVGPDGHTCSLFPGHPLLQEQDEIVAALKDSPKPPAARVTLTLPVLNAARSVLVVAAGASKAPVLKRILEGKEEPPLPAALVRPRSGRLRWLLDEAAAAELSIPT 248          
BLAST of mRNA_P-wetherbeei_contig52153.1.1 vs. uniprot
Match: A0A218UBA8_9PASE (6-phosphogluconolactonase n=4 Tax=Estrildinae TaxID=40155 RepID=A0A218UBA8_9PASE)

HSP 1 Score: 121 bits (304), Expect = 1.620e-31
Identity = 68/134 (50.75%), Postives = 89/134 (66.42%), Query Frame = 1
Query:    1 LDPAEAARAAEEDLRSAVPGSPWPVLDLVILGMGPDGHTASLFPGAPELEEATRLMVPVHRPEMPQPWRVSMTMPVINAARAVLVLVGGIEKAPMVRRALAGD----PSIPAGRVRPQ-GRLTWIVTRDAASEL 387
            L PAEAAR  EE LR   PG   P  DL++LG+GPDGHT SLFPG   L+E   L+  +     P P RV+MT+P++NAARA+LV+  G  KAP+++R L       PS+PA R+RP+ GRL W++ R+AA EL
Sbjct:  111 LGPAEAARDYEEQLRREFPGEATPRFDLLLLGVGPDGHTCSLFPGHALLQEQNSLISFLEDSPKPPPRRVTMTLPLLNAARALLVVATGASKAPVIKRILEEPREEAPSLPAARLRPRSGRLRWLLDREAAEEL 244          
BLAST of mRNA_P-wetherbeei_contig52153.1.1 vs. uniprot
Match: UPI0018D4EDF3 (6-phosphogluconolactonase isoform X1 n=2 Tax=Motacilla alba alba TaxID=1094192 RepID=UPI0018D4EDF3)

HSP 1 Score: 121 bits (304), Expect = 1.620e-31
Identity = 68/132 (51.52%), Postives = 90/132 (68.18%), Query Frame = 1
Query:    1 LDPAEAARAAEEDLRSAVPGSPWPVLDLVILGMGPDGHTASLFPGAPELEEATRLMVPVHRPEMPQPWRVSMTMPVINAARAVLVLVGGIEKAPMVRRALAGD--PSIPAGRVRPQ-GRLTWIVTRDAASEL 387
            L PAEAAR  EE LR A PG   P  DL++LG+GPDGHT SLFPG   L+E   L+  +     P P RV+MT+P++NAARA+L++  G  KAP+++R L     P +PA R+RP+ GRL WI+ R+AA+EL
Sbjct:  111 LGPAEAARDYEEQLRKAFPGEEPPRFDLLLLGVGPDGHTCSLFPGHALLQEQRSLVSFLEDSPKPPPRRVTMTLPLLNAARALLLVASGAAKAPVLKRLLEQQEQPPLPAARLRPRSGRLRWILDREAAAEL 242          
BLAST of mRNA_P-wetherbeei_contig52153.1.1 vs. uniprot
Match: A0A7I9VQ80_9DELT (6-phosphogluconolactonase n=1 Tax=Anaeromyxobacter sp. Red267 TaxID=2590199 RepID=A0A7I9VQ80_9DELT)

HSP 1 Score: 118 bits (296), Expect = 2.660e-30
Identity = 69/132 (52.27%), Postives = 87/132 (65.91%), Query Frame = 1
Query:    4 DPAEAARAAEEDLRSAV---PGSPWPVLDLVILGMGPDGHTASLFPGAPELEEATRLMVPVHRPEMPQPWRVSMTMPVINAARAVLVLVGGIEKAPMVRRALAGDPSIPAGRVRPQ-GRLTWIVTRDAASEL 387
            DPA AARA E +LR+A+    G   P LDLV+LG+GPDGHTASLFPG   LE + RL+   H P +   WR++ T+P+++AARAV+ LV G EKAP V   L G   +PA RVRP+ G L W +   AAS L
Sbjct:  122 DPAAAARAYEAELRAALGSEEGDGVPRLDLVLLGLGPDGHTASLFPGTAALEASDRLVAANHVPRLGA-WRLTFTLPLLDAARAVIFLVAGAEKAPAVAAVLEGGADLPAARVRPERGELLWALDAAAASGL 252          
BLAST of mRNA_P-wetherbeei_contig52153.1.1 vs. uniprot
Match: UPI00146E6619 (6-phosphogluconolactonase n=1 Tax=Melopsittacus undulatus TaxID=13146 RepID=UPI00146E6619)

HSP 1 Score: 112 bits (281), Expect = 4.100e-28
Identity = 64/132 (48.48%), Postives = 84/132 (63.64%), Query Frame = 1
Query:    1 LDPAEAARAAEEDLRSAVPGSPWPVLDLVILGMGPDGHTASLFPGAPELEEATRLMVPVHRPEMPQPWRVSMTMPVINAARAVLVLVGGIEKAPMVRRALAGDPS--IPAGRVRPQ-GRLTWIVTRDAASEL 387
            L PA AA      LR A PG P PV DL++LG+GPDGHT SLFPG P L+E   ++  +     P P R++ T+PV+NAA+AV+ +  G  KA +V+R L GD    +PA RVRP+ G+L WI+   AA EL
Sbjct:  109 LAPAAAAADYAARLRQAFPGEPVPVFDLLLLGVGPDGHTCSLFPGHPLLQEQEAVVAAITDSPKPPPERITFTLPVLNAAKAVVFVATGEGKAAVVKRILEGDEENPLPAARVRPRSGQLCWILDEAAAKEL 240          
BLAST of mRNA_P-wetherbeei_contig52153.1.1 vs. uniprot
Match: A0A8J4YAX4_CHIOP (6-phosphogluconolactonase n=1 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J4YAX4_CHIOP)

HSP 1 Score: 112 bits (280), Expect = 4.700e-28
Identity = 63/125 (50.40%), Postives = 78/125 (62.40%), Query Frame = 1
Query:   16 AARAAEEDLRSAVPGSPWPVLDLVILGMGPDGHTASLFPGAPELEEATRLMVPVHRPEMPQPWRVSMTMPVINAARAVLVLVGGIEKAPMVRRALAGDPSIPAGRVRP-QGRLTWIVTRDAASEL 387
            AA+  EE +R+  P S WP  DL++LGMGPDGHTASLFP  P LEE +  +  +H    P P RV+MT PVIN A      + G  KA MV+R L    S+P+GRVRP  G L WI+   AAS+L
Sbjct:  116 AAKDYEEKVRAKFPESAWPRFDLLLLGMGPDGHTASLFPDHPLLEEKSVWIAAIHDSPKPPPCRVTMTYPVINNAGCCAFAMAGQGKADMVKRILGDGESLPSGRVRPTDGELIWILDEAAASKL 240          
BLAST of mRNA_P-wetherbeei_contig52153.1.1 vs. uniprot
Match: A0A3M1ULD2_9GAMM (6-phosphogluconolactonase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1ULD2_9GAMM)

HSP 1 Score: 112 bits (280), Expect = 5.910e-28
Identity = 66/127 (51.97%), Postives = 82/127 (64.57%), Query Frame = 1
Query:   16 AARAAEEDLRSAVPGSPW--PVLDLVILGMGPDGHTASLFPGAPELEEATRLMVPVHRPEMPQPWRVSMTMPVINAARAVLVLVGGIEKAPMVRRALAG-DPSIPAGRVRPQGRLTWIVTRDAASEL 387
            AAR  E  LR+ +P  P   PV DLV+LG+G DGHTASLFPG P LE  TRL+VPV     P P R+S T P+I AAR V+ LV G +KA +V R L   D  +PA R+RP GR+ W++  +AA  L
Sbjct:  121 AARRYEAQLRATLPADPAGRPVFDLVLLGVGTDGHTASLFPGTPALETRTRLVVPVEARVEP-PRRISFTPPLIEAAREVVFLVAGRDKAAVVARLLGDRDSELPAARLRPSGRVRWLLDAEAARAL 246          
BLAST of mRNA_P-wetherbeei_contig52153.1.1 vs. uniprot
Match: A0A5B7DRF2_PORTR (6-phosphogluconolactonase n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=A0A5B7DRF2_PORTR)

HSP 1 Score: 110 bits (275), Expect = 6.100e-28
Identity = 60/125 (48.00%), Postives = 78/125 (62.40%), Query Frame = 1
Query:   16 AARAAEEDLRSAVPGSPWPVLDLVILGMGPDGHTASLFPGAPELEEATRLMVPVHRPEMPQPWRVSMTMPVINAARAVLVLVGGIEKAPMVRRALAGDPSIPAGRVRPQG-RLTWIVTRDAASEL 387
            AA+  EE +R+  P S WP  DL++LGMGPDGHTASLFPG P L+E +  +  +     P P RV+MT PVIN AR     + G  KA MV+R L     +P+G V+P G  L WI+ + AAS+L
Sbjct:   57 AAKDYEEKIRAKFPDSDWPQFDLLLLGMGPDGHTASLFPGHPLLDEQSVWVAAIADSPKPPPCRVTMTFPVINKARCCAFAMAGEGKADMVKRILGDGEELPSGMVQPTGGELLWILDKSAASKL 181          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52153.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C3D600D3.830e-6274.626-phosphogluconolactonase n=1 Tax=Miltoncostaea ma... [more]
UPI001C3D9A911.490e-5771.546-phosphogluconolactonase n=1 Tax=Miltoncostaea oc... [more]
A0A6J2HUX4_9PASS1.200e-3149.266-phosphogluconolactonase n=3 Tax=Pipridae TaxID=1... [more]
A0A218UBA8_9PASE1.620e-3150.756-phosphogluconolactonase n=4 Tax=Estrildinae TaxI... [more]
UPI0018D4EDF31.620e-3151.526-phosphogluconolactonase isoform X1 n=2 Tax=Motac... [more]
A0A7I9VQ80_9DELT2.660e-3052.276-phosphogluconolactonase n=1 Tax=Anaeromyxobacter... [more]
UPI00146E66194.100e-2848.486-phosphogluconolactonase n=1 Tax=Melopsittacus un... [more]
A0A8J4YAX4_CHIOP4.700e-2850.406-phosphogluconolactonase n=1 Tax=Chionoecetes opi... [more]
A0A3M1ULD2_9GAMM5.910e-2851.976-phosphogluconolactonase n=1 Tax=Gammaproteobacte... [more]
A0A5B7DRF2_PORTR6.100e-2848.006-phosphogluconolactonase n=1 Tax=Portunus tritube... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52153contigP-wetherbeei_contig52153:14..424 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog7918.ENSLOCP00000010424
Preferred namePGLS
PFAMsGlucosamine_iso
Model size411
Max annot lvl33208|Metazoa
KEGG rclassRC00537
KEGG koko:K01057
KEGG ReactionR02035
KEGG Pathwayko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00004,M00006,M00008
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009051,GO:0009117,GO:0009987,GO:0016787,GO:0016788,GO:0017057,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0030246,GO:0034641,GO:0036094,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048029,GO:0051156,GO:0051186,GO:0052689,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564
Exons1
Evalue6.14e-28
EggNOG OGsCOG0363@1|root,KOG3147@2759|Eukaryota,39U1J@33154|Opisthokonta,3BEMD@33208|Metazoa,3CW6A@33213|Bilateria,485RG@7711|Chordata,490GE@7742|Vertebrata,49SNK@7898|Actinopterygii
EC3.1.1.31
Description6-phosphogluconolactonase
Cds size411
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186782.2140815-CDS-P-wetherbeei_contig52153:13..4241683186782.2140815-CDS-P-wetherbeei_contig52153:13..424Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig52153 14..424 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52153.1.1prot_P-wetherbeei_contig52153.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig52153 14..424 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig52153.1.1

>prot_P-wetherbeei_contig52153.1.1 ID=prot_P-wetherbeei_contig52153.1.1|Name=mRNA_P-wetherbeei_contig52153.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp
LDPAEAARAAEEDLRSAVPGSPWPVLDLVILGMGPDGHTASLFPGAPELE
EATRLMVPVHRPEMPQPWRVSMTMPVINAARAVLVLVGGIEKAPMVRRAL
AGDPSIPAGRVRPQGRLTWIVTRDAASELASETGSA*
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mRNA from alignment at P-wetherbeei_contig52153:14..424+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig52153.1.1 ID=mRNA_P-wetherbeei_contig52153.1.1|Name=mRNA_P-wetherbeei_contig52153.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig52153:14..424+ (Phaeothamnion wetherbeei SAG_119_79)
CTCGATCCCGCCGAGGCGGCGCGGGCGGCGGAGGAGGACCTGCGCTCCGC CGTGCCCGGCTCGCCCTGGCCGGTGCTCGACCTGGTGATCCTCGGGATGG GCCCCGACGGGCACACCGCGTCGCTCTTTCCCGGGGCCCCGGAGCTGGAG GAGGCGACCCGCCTGATGGTGCCGGTCCACCGGCCCGAGATGCCGCAGCC GTGGCGGGTGTCGATGACGATGCCGGTGATCAACGCCGCGCGCGCGGTGC TGGTGCTGGTCGGCGGGATCGAGAAGGCCCCGATGGTGAGGCGCGCCCTC GCCGGCGACCCGAGCATCCCCGCCGGACGGGTGCGGCCGCAGGGTCGGCT CACCTGGATCGTGACCCGGGATGCCGCATCCGAGCTGGCATCGGAGACCG GCTCAGCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig52153:14..424+

>mRNA_P-wetherbeei_contig52153.1.1 ID=mRNA_P-wetherbeei_contig52153.1.1|Name=mRNA_P-wetherbeei_contig52153.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig52153:14..424+ (Phaeothamnion wetherbeei SAG_119_79)
CTCGATCCCGCCGAGGCGGCGCGGGCGGCGGAGGAGGACCTGCGCTCCGC
CGTGCCCGGCTCGCCCTGGCCGGTGCTCGACCTGGTGATCCTCGGGATGG
GCCCCGACGGGCACACCGCGTCGCTCTTTCCCGGGGCCCCGGAGCTGGAG
GAGGCGACCCGCCTGATGGTGCCGGTCCACCGGCCCGAGATGCCGCAGCC
GTGGCGGGTGTCGATGACGATGCCGGTGATCAACGCCGCGCGCGCGGTGC
TGGTGCTGGTCGGCGGGATCGAGAAGGCCCCGATGGTGAGGCGCGCCCTC
GCCGGCGACCCGAGCATCCCCGCCGGACGGGTGCGGCCGCAGGGTCGGCT
CACCTGGATCGTGACCCGGGATGCCGCATCCGAGCTGGCATCGGAGACCG
GCTCAGCCTGA
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