mRNA_P-wetherbeei_contig52129.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52129.2.1 vs. uniprot
Match: UPI0019969E4B (DUF4281 domain-containing protein n=1 Tax=Sandarakinorhabdus sp. TaxID=1916663 RepID=UPI0019969E4B) HSP 1 Score: 65.9 bits (159), Expect = 1.020e-11 Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 1
Query: 16 MNLEQIFSAMSLLAMVGWLCLALAPLRRPMLIAAARVIAAVLALAYVILIVRGLLQP-GRPEGGGFDSLAKVMILLSVPATML 261
M LEQ+FS S A+VGW+ L LAP+RR + AR++AA+L AY+ +V GL G P G GF+SLA V +LLS P +L
Sbjct: 1 MTLEQVFSLASAAALVGWVLLVLAPVRRRAAVTGARLVAALLCGAYLAFLVTGLTGGNGPPAGAGFNSLAGVRLLLSSPQALL 83
BLAST of mRNA_P-wetherbeei_contig52129.2.1 vs. uniprot
Match: A0A2W4VDI1_9PROT (DUF4281 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2W4VDI1_9PROT) HSP 1 Score: 59.7 bits (143), Expect = 2.710e-9 Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 1
Query: 16 MNLEQIFSAMSLLAMVGWLCLALAPLRRPMLIAAARVIAAVLALAYVILIVRGLLQPGRPEGGGFDSLAKVMILLSVPATML 261
M +++F +L+A++GW+ LA APL R L+ AARVI LAL Y L++ + G EGGGF SL V L + P +L
Sbjct: 1 MTTDRLFDIANLIALLGWIALAFAPLARDRLVLAARVIGVALALTYAGLLIGSIAGGGMSEGGGFTSLEGVTALFARPEAVL 82
BLAST of mRNA_P-wetherbeei_contig52129.2.1 vs. uniprot
Match: UPI001C628134 (DUF4281 domain-containing protein n=1 Tax=Aquisediminimonas profunda TaxID=1550733 RepID=UPI001C628134) HSP 1 Score: 56.2 bits (134), Expect = 5.480e-8 Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 1
Query: 16 MNLEQIFSAMSLLAMVGWLCLALAPLRRPMLIAAARVIAAVLALAYVILIVRGLLQPGRPEGGGFDSLAKVMILLSVPATML 261
M+LE I+S S LAM+GWL LALAPL+R IA AR++A +LA+AY+ + +G GF SLA++ L + P ++
Sbjct: 1 MHLEGIYSGTSALAMIGWLVLALAPLQRDSSIAFARILALLLAVAYLA---QFFFTTETIDGAGFGSLAEITALFTSPGNVM 79
BLAST of mRNA_P-wetherbeei_contig52129.2.1 vs. uniprot
Match: A0A258FH18_9CAUL (Uncharacterized protein n=1 Tax=Brevundimonas subvibrioides TaxID=74313 RepID=A0A258FH18_9CAUL) HSP 1 Score: 55.8 bits (133), Expect = 7.290e-8 Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 16 MNLEQIFSAMSLLAMVGWLCLALAPLRRPMLIAAARVIAAVLALAYVILIVRGLLQPGRPEGGGFD 213
M+LE FS + +A+VGW+ LALAPLRRP+ IAAAR I LA+AY L++R + GGGF+
Sbjct: 1 MSLETQFSLANAVALVGWIILALAPLRRPLAIAAARTIGVALAVAYSALLIRAV------TGGGFE 60
BLAST of mRNA_P-wetherbeei_contig52129.2.1 vs. uniprot
Match: A0A1S6EY41_9CAUL (Uncharacterized protein n=1 Tax=Brevundimonas sp. LM2 TaxID=1938605 RepID=A0A1S6EY41_9CAUL) HSP 1 Score: 53.9 bits (128), Expect = 4.260e-7 Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 1
Query: 16 MNLEQIFSAMSLLAMVGWLCLALAPLRRPMLIAAARVIAAVLALAYVILIVRGLLQPGRPEGGGFDSLAKVMILLSVPATML 261
M L+ +F+ + +A+VGW+ LALAPLRRP+ IAAAR I LA+AY +L+V+ + G GG +LA + S P +L
Sbjct: 1 MTLDALFNLANAVALVGWVILALAPLRRPLAIAAARSIGVGLAVAYAVLLVQAVASGGL--GGDLTTLAGLTEGFSRPEAVL 80
BLAST of mRNA_P-wetherbeei_contig52129.2.1 vs. uniprot
Match: A0A552UFI1_9SPHN (DUF4281 domain-containing protein n=1 Tax=Glacieibacterium frigidum TaxID=2593303 RepID=A0A552UFI1_9SPHN) HSP 1 Score: 53.5 bits (127), Expect = 5.880e-7 Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 1
Query: 16 MNLEQIFSAMSLLAMVGWLCLALAPLRRPMLIAAARVIAAVLALAYVILIVRGLLQPGRPEGGGFDSLAKVMILLSVPATML 261
M L+Q+F S + +VGWL LALAPL+RP ++ AR++AA+L YV ++ L P G F +L + L S +L
Sbjct: 1 MPLDQLFRIASTVVLVGWLALALAPLKRPAMVTTARLVAALLCGGYVAIVGHALATGPAPSGASFMTLDGIASLFSSRTALL 82
BLAST of mRNA_P-wetherbeei_contig52129.2.1 vs. uniprot
Match: UPI0004959BC7 (ABA4-like family protein n=1 Tax=Brevundimonas bacteroides TaxID=74311 RepID=UPI0004959BC7) HSP 1 Score: 53.1 bits (126), Expect = 8.420e-7 Identity = 32/66 (48.48%), Postives = 46/66 (69.70%), Query Frame = 1
Query: 16 MNLEQIFSAMSLLAMVGWLCLALAPLRRPMLIAAARVIAAVLALAYVILIVRGLLQPGRPEGGGFD 213
M+ E +FS + +A+VGW+ LALAP+RR + IAAARVI LA+ Y +L++R L+ GGGF+
Sbjct: 1 MSPETLFSVANAVALVGWIILALAPVRRLLAIAAARVIGVGLAVTYAVLLIRSLI------GGGFE 60
BLAST of mRNA_P-wetherbeei_contig52129.2.1 vs. uniprot
Match: UPI001ADF79B6 (DUF4281 domain-containing protein n=1 Tax=Brevundimonas sp. AJA228-03 TaxID=2752515 RepID=UPI001ADF79B6) HSP 1 Score: 53.1 bits (126), Expect = 8.720e-7 Identity = 35/82 (42.68%), Postives = 52/82 (63.41%), Query Frame = 1
Query: 16 MNLEQIFSAMSLLAMVGWLCLALAPLRRPMLIAAARVIAAVLALAYVILIVRGLLQPGRPEGGGFDSLAKVMILLSVPATML 261
M L+ +F+ + +A+VGW+ LALAPLRR ++IAAAR IA LA+ Y +L+VR + G GG +L+ + S P +L
Sbjct: 1 MTLDALFNIANTVALVGWIILALAPLRRDLVIAAARCIAIALAVTYTVLLVRAVAGGGL--GGDLTTLSGLTEGFSKPEAVL 80
BLAST of mRNA_P-wetherbeei_contig52129.2.1 vs. uniprot
Match: D9QP53_BRESC (Putative integral membrane protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) TaxID=633149 RepID=D9QP53_BRESC) HSP 1 Score: 49.3 bits (116), Expect = 2.690e-5 Identity = 33/82 (40.24%), Postives = 51/82 (62.20%), Query Frame = 1
Query: 16 MNLEQIFSAMSLLAMVGWLCLALAPLRRPMLIAAARVIAAVLALAYVILIVRGLLQPGRPEGGGFDSLAKVMILLSVPATML 261
M L+ +F+ + +A+VGW+ LALAPL R ++IAAAR IA LA+ Y +L+V+ + G GG +L+ + S P +L
Sbjct: 1 MTLDTLFNVANTVALVGWIVLALAPLLRGLVIAAARCIAVALAVTYSVLLVQAVANGGL--GGDLTTLSGLTEGFSKPEAVL 80 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52129.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52129.2.1 >prot_P-wetherbeei_contig52129.2.1 ID=prot_P-wetherbeei_contig52129.2.1|Name=mRNA_P-wetherbeei_contig52129.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=82bp MNLEQIFSAMSLLAMVGWLCLALAPLRRPMLIAAARVIAAVLALAYVILIback to top mRNA from alignment at P-wetherbeei_contig52129:285..545+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52129.2.1 ID=mRNA_P-wetherbeei_contig52129.2.1|Name=mRNA_P-wetherbeei_contig52129.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=261bp|location=Sequence derived from alignment at P-wetherbeei_contig52129:285..545+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52129:285..545+ >mRNA_P-wetherbeei_contig52129.2.1 ID=mRNA_P-wetherbeei_contig52129.2.1|Name=mRNA_P-wetherbeei_contig52129.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=246bp|location=Sequence derived from alignment at P-wetherbeei_contig52129:285..545+ (Phaeothamnion wetherbeei SAG_119_79)back to top |