mRNA_P-wetherbeei_contig5205.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5205.2.1 vs. uniprot
Match: A0A3Q3B436_KRYMA (Reverse transcriptase domain-containing protein n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q3B436_KRYMA) HSP 1 Score: 119 bits (299), Expect = 4.030e-28 Identity = 72/172 (41.86%), Postives = 100/172 (58.14%), Query Frame = 1
Query: 7 NYRLIALLNVDYKILANAWSQKLALWLPAAIGLDQTGFVPGRDIATNITLLRDLAAQSGAQASKNFSAAILFLAFAKAYETVEHDFLWRALEARGLPKSFVLNVQLLYRGASATLQINGRAAAPLLPGRGVRQGCLLSSPLFLLVLECLLDVLREDEGLKGVLLKGRPSRVV 522
N+R ++LL DYKIL+ A + +L + I DQT VPGR + NI L+RD+ SG S ++ L KA++ VEHDFLW+ + G + + +Q+LY GA + L+ING AP GRGVRQGC LS L+ L LE LL LR ++G++L G S +V
Sbjct: 553 NWRPVSLLCTDYKILSKALAARLGKAMEQVIHRDQTYCVPGRSMVDNIYLIRDVLEVSG---SLGLQTGLISLDQEKAFDRVEHDFLWKTMRGFGFSEGLIAKMQVLYSGAESLLKINGGLCAPFRVGRGVRQGCALSGMLYALSLEPLLQKLRSS--IRGLVLPGFSSNMV 719
BLAST of mRNA_P-wetherbeei_contig5205.2.1 vs. uniprot
Match: A0A672HUD6_SALFA (Reverse transcriptase domain-containing protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672HUD6_SALFA) HSP 1 Score: 115 bits (287), Expect = 7.590e-28 Identity = 69/166 (41.57%), Postives = 97/166 (58.43%), Query Frame = 1
Query: 7 NYRLIALLNVDYKILANAWSQKLALWLPAAIGLDQTGFVPGRDIATNITLLRDLAAQSGAQASKNFSAAILFLAFAKAYETVEHDFLWRALEARGLPKSFVLNVQLLYRGASATLQINGRAAAPLLPGRGVRQGCLLSSPLFLLVLECLLDVLREDEGLKGVLLKG 504
N+R ++LL VDYK+L+ + +L + I DQT VPGR + N+ L+RD+ S S + A ++ + KA++ VEH FLWR +E+ G F+ +Q+LYR + L+ING AP RGVRQGC LS L+ L LE LL LR L+G+LL G
Sbjct: 74 NWRPVSLLCVDYKLLSKVLASRLGRAMEQVIHRDQTYCVPGRSMVDNVHLIRDVLEVSS---SLDIDAGLISVDQEKAFDRVEHSFLWRVMESFGFSAGFIAKIQVLYRDIESVLKINGSLCAPFRVCRGVRQGCALSGMLYALSLEPLLSKLRSS--LQGLLLPG 234
BLAST of mRNA_P-wetherbeei_contig5205.2.1 vs. uniprot
Match: A0A146I3T2_MYCCL (Uncharacterized protein n=2 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146I3T2_MYCCL) HSP 1 Score: 115 bits (288), Expect = 1.300e-26 Identity = 73/173 (42.20%), Postives = 98/173 (56.65%), Query Frame = 1
Query: 7 NYRLIALLNVDYKILANAWSQKLALWLPAAIGLDQTGFVPGRDIATNITLLRDLAAQSGAQASKNFSAAILFLAFAKAYETVEHDFLWRALEARGLPKSFVLNVQLLYRGASATLQING-RAAAPLLPGRGVRQGCLLSSPLFLLVLECLLDVLREDEGLKGVLLKGRPSRVV 522
NYR I+LLN DYKI A + KLA P I DQ GFVPGR I + L + + + A + AI+ L KAY+ +EHD+LWR L G+P F+ ++ LY A + +NG R+ P RGVRQG LS LF L +E L + LR+ + LKG+ LK R R++
Sbjct: 782 NYRPISLLNTDYKIFTKALTIKLAAVAPKLIHKDQAGFVPGRQIRDQVWLTKRIIELAEAT---EMNGAIVALDQEKAYDKIEHDYLWRVLAKFGIPNEFINTIKALYSDAQTFVMVNGERSRYPFRVTRGVRQGDPLSCLLFDLAIEPLAEALRKSD-LKGIQLKNRRERII 950
BLAST of mRNA_P-wetherbeei_contig5205.2.1 vs. uniprot
Match: A0A665TRI9_ECHNA (Reverse transcriptase domain-containing protein n=1 Tax=Echeneis naucrates TaxID=173247 RepID=A0A665TRI9_ECHNA) HSP 1 Score: 112 bits (280), Expect = 1.350e-25 Identity = 68/172 (39.53%), Postives = 100/172 (58.14%), Query Frame = 1
Query: 7 NYRLIALLNVDYKILANAWSQKLALWLPAAIGLDQTGFVPGRDIATNITLLRDLAAQSGAQASKNFSAAILFLAFAKAYETVEHDFLWRALEARGLPKSFVLNVQLLYRGASATLQINGRAAAPLLPGRGVRQGCLLSSPLFLLVLECLLDVLREDEGLKGVLLKGRPSRVV 522
N+R ++LL DYK+LA A +++L + + +DQ+ VPGR I+ N+TL+R + SG S + ++ + KA++ VEH +LW+ L A G F+ +Q+LYR ++ L+ING AAP RGVRQGC LS L+ L +E LL LR G G+ R S V
Sbjct: 523 NWRPVSLLCGDYKVLAKALARRLREVMAEVVHVDQSYCVPGRTISDNVTLIRHVLELSG---SLDMDTGLISIDQEKAFDRVEHRYLWQTLGAFGFGPGFIAGIQVLYRDVASILKINGGLAAPFSVQRGVRQGCPLSGMLYSLAIEPLLHRLRGGAGGSGLPWMSRSSEAV 691
BLAST of mRNA_P-wetherbeei_contig5205.2.1 vs. uniprot
Match: A0A3Q2ZXK0_KRYMA (Reverse transcriptase domain-containing protein n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q2ZXK0_KRYMA) HSP 1 Score: 111 bits (277), Expect = 3.670e-25 Identity = 67/172 (38.95%), Postives = 97/172 (56.40%), Query Frame = 1
Query: 7 NYRLIALLNVDYKILANAWSQKLALWLPAAIGLDQTGFVPGRDIATNITLLRDLAAQSGAQASKNFSAAILFLAFAKAYETVEHDFLWRALEARGLPKSFVLNVQLLYRGASATLQINGRAAAPLLPGRGVRQGCLLSSPLFLLVLECLLDVLREDEGLKGVLLKGRPSRVV 522
N+R ++LL DYKIL+ A + +L + I DQT VPGR + N+ L+RD+ SG S ++ L KA++ VEH FLW+ + G + + +Q+LY G + L+ING AP RGVRQGC LS L+ L LE LL LR ++G++L G + +V
Sbjct: 209 NWRPVSLLCTDYKILSKALAARLGKAMEQVIHRDQTYCVPGRSMVDNVYLIRDVLEVSG---SLGLRTGLISLDQEKAFDRVEHGFLWKTMGGFGFSEGLIAKIQVLYSGVESLLKINGSLCAPFRVCRGVRQGCALSGMLYALSLEPLLQKLRSS--IRGLVLPGFSNNIV 375
BLAST of mRNA_P-wetherbeei_contig5205.2.1 vs. uniprot
Match: A0A3Q3H443_9LABR (Reverse transcriptase domain-containing protein n=2 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3H443_9LABR) HSP 1 Score: 110 bits (275), Expect = 6.770e-25 Identity = 70/162 (43.21%), Postives = 96/162 (59.26%), Query Frame = 1
Query: 7 NYRLIALLNVDYKILANAWSQKLALWLPAAIGLDQTGFVPGRDIATNITLLRDLAAQSGAQASKNFSAAILFLAFAKAYETVEHDFLWRALEARGLPKSFVLNVQLLYRGASATLQINGRAAAPLLPGRGVRQGCLLSSPLFLLVLECLLDVLREDEGLKGV 492
N+R ++LL DYKIL+ + +L + + I DQT VPGR I+ NITL+R + SG+ A ++ L KA++ VEH +LWR L A G F+ +Q+LYR ++ L+ING +AP RGVRQGC LS L+ L +E LL LR GL GV
Sbjct: 161 NWRPVSLLCTDYKILSKVLASRLRQVMGSIIHTDQTYCVPGRLISDNITLIRHVLEVSGSLA---VDTGLISLDQEKAFDRVEHQYLWRTLTAFGFNPCFLAKIQVLYRDIASVLKINGGLSAPFSVQRGVRQGCSLSGMLYSLAIEPLLHRLRS--GLSGV 317
BLAST of mRNA_P-wetherbeei_contig5205.2.1 vs. uniprot
Match: A0A3Q3F5N5_9LABR (Reverse transcriptase domain-containing protein n=2 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3F5N5_9LABR) HSP 1 Score: 110 bits (275), Expect = 6.790e-25 Identity = 70/162 (43.21%), Postives = 96/162 (59.26%), Query Frame = 1
Query: 7 NYRLIALLNVDYKILANAWSQKLALWLPAAIGLDQTGFVPGRDIATNITLLRDLAAQSGAQASKNFSAAILFLAFAKAYETVEHDFLWRALEARGLPKSFVLNVQLLYRGASATLQINGRAAAPLLPGRGVRQGCLLSSPLFLLVLECLLDVLREDEGLKGV 492
N+R ++LL DYKIL+ + +L + + I DQT VPGR I+ NITL+R + SG+ A ++ L KA++ VEH +LWR L A G F+ +Q+LYR ++ L+ING +AP RGVRQGC LS L+ L +E LL LR GL GV
Sbjct: 343 NWRPVSLLCTDYKILSKVLASRLRQVMGSIIHTDQTYCVPGRLISDNITLIRHVLEVSGSLA---VDTGLISLDQEKAFDRVEHQYLWRTLTAFGFNPCFLAKIQVLYRDIASVLKINGGLSAPFSVQRGVRQGCSLSGMLYSLAIEPLLHRLRS--GLSGV 499
BLAST of mRNA_P-wetherbeei_contig5205.2.1 vs. uniprot
Match: A0A3Q3AE51_KRYMA (Reverse transcriptase domain-containing protein n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q3AE51_KRYMA) HSP 1 Score: 109 bits (272), Expect = 9.080e-25 Identity = 67/172 (38.95%), Postives = 97/172 (56.40%), Query Frame = 1
Query: 7 NYRLIALLNVDYKILANAWSQKLALWLPAAIGLDQTGFVPGRDIATNITLLRDLAAQSGAQASKNFSAAILFLAFAKAYETVEHDFLWRALEARGLPKSFVLNVQLLYRGASATLQINGRAAAPLLPGRGVRQGCLLSSPLFLLVLECLLDVLREDEGLKGVLLKGRPSRVV 522
N+R ++LL DYKIL+ A + +L + I DQT VP R + NI L+RD+ SG S A ++ L KA++ VEHDFLW+ ++ G + + +Q+LY + L+ING AP RGVRQGC LS L+ L LE LL +R + G++L G + +V
Sbjct: 64 NWRPVSLLCTDYKILSKALATRLGKAMEQVIHRDQTYCVPSRSMVDNIYLIRDVLEVSG---SLGLQAGLISLDQEKAFDRVEHDFLWKTMKGFGFGEGLIAKIQVLYSDIESVLKINGSLCAPFRVCRGVRQGCALSGMLYSLSLEPLLQKIRSS--VHGLVLPGFSNNIV 230
BLAST of mRNA_P-wetherbeei_contig5205.2.1 vs. uniprot
Match: A0A672HKG1_SALFA (Reverse transcriptase domain-containing protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672HKG1_SALFA) HSP 1 Score: 109 bits (273), Expect = 1.290e-24 Identity = 69/166 (41.57%), Postives = 94/166 (56.63%), Query Frame = 1
Query: 7 NYRLIALLNVDYKILANAWSQKLALWLPAAIGLDQTGFVPGRDIATNITLLRDLAAQSGAQASKNFSAAILFLAFAKAYETVEHDFLWRALEARGLPKSFVLNVQLLYRGASATLQINGRAAAPLLPGRGVRQGCLLSSPLFLLVLECLLDVLREDEGLKGVLLKG 504
N+R ++LL VDYK+L+ + +L + I DQT VPGR + NI L+RD+ S S + A + + KA++ VEH FLWR +E+ G F+ +Q+LYR + L+ING AP RGVRQGC LS L L LE LL L L+G+LL G
Sbjct: 527 NWRPVSLLCVDYKLLSKVLASRLGRAMEQVIHRDQTNCVPGRSMVDNIHLIRDVLEVSS---SLDIDAGQISVDQEKAFDRVEHSFLWRVMESFGFSAGFIAKIQVLYRDIESVLKINGSLCAPFRVCRGVRQGCALSGMLDALSLEPLLSKL--CSSLQGLLLPG 687
BLAST of mRNA_P-wetherbeei_contig5205.2.1 vs. uniprot
Match: A0A3Q3H439_9LABR (Reverse transcriptase domain-containing protein n=2 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3H439_9LABR) HSP 1 Score: 109 bits (272), Expect = 1.750e-24 Identity = 65/172 (37.79%), Postives = 99/172 (57.56%), Query Frame = 1
Query: 7 NYRLIALLNVDYKILANAWSQKLALWLPAAIGLDQTGFVPGRDIATNITLLRDLAAQSGAQASKNFSAAILFLAFAKAYETVEHDFLWRALEARGLPKSFVLNVQLLYRGASATLQINGRAAAPLLPGRGVRQGCLLSSPLFLLVLECLLDVLREDEGLKGVLLKGRPSRVV 522
N+R ++LL VDYK+L+ ++ +L + I DQT VPGR + N+ L+RD+ S S + ++ L KA++ VEH+FLW+ +E G F+ +++LY G + L+ NG AP RGVRQGC LS L+ L LE LL+ +R +G++L G S +V
Sbjct: 499 NWRPVSLLCVDYKLLSKLFASRLGKAMEQVIHRDQTYCVPGRSMVDNVHLIRDVLDVSS---SSGCNTGLISLDQEKAFDRVEHNFLWKVMEKFGFSAGFIAKIKVLYSGVESVLKFNGGLCAPFRVCRGVRQGCALSGMLYTLSLEPLLNNIRYHS--QGLVLPGFNSNIV 665 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5205.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5205.2.1 >prot_P-wetherbeei_contig5205.2.1 ID=prot_P-wetherbeei_contig5205.2.1|Name=mRNA_P-wetherbeei_contig5205.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=174bp PANYRLIALLNVDYKILANAWSQKLALWLPAAIGLDQTGFVPGRDIATNIback to top mRNA from alignment at P-wetherbeei_contig5205:1662..2183+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5205.2.1 ID=mRNA_P-wetherbeei_contig5205.2.1|Name=mRNA_P-wetherbeei_contig5205.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig5205:1662..2183+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5205:1662..2183+ >mRNA_P-wetherbeei_contig5205.2.1 ID=mRNA_P-wetherbeei_contig5205.2.1|Name=mRNA_P-wetherbeei_contig5205.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig5205:1662..2183+ (Phaeothamnion wetherbeei SAG_119_79)back to top |