mRNA_P-wetherbeei_contig51972.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig51972.1.1 vs. uniprot
Match: A0A127F0M5_9HYPH (Cytochrome c, mono-and diheme variants family n=2 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127F0M5_9HYPH) HSP 1 Score: 143 bits (360), Expect = 8.950e-42 Identity = 73/121 (60.33%), Postives = 89/121 (73.55%), Query Frame = 1
Query: 1 MTSMGIKLGLVAIVA-SLGLGQGAALAAS-ADKGKKLYVQYGCWGCHGFEGQGSVATSGGKVLAPEPMAWETFESFVRTTNRTMPPYRESVLPKADLEDIYAFLQTIPKPKDYKSIPLLNQ 357
MT ++ L A+ A ++ L G+A AA A KGK + +YGCW CHG+EGQGS TS GKVLAP+P+ W+TF +FVRTTNR MPP+ E VLP DL DIYA+L +IPK KDYKSIPLLNQ
Sbjct: 7 MTRSFVRFVLAAVAAGTVALASGSAFAAGDAVKGKANFQKYGCWQCHGYEGQGSAVTSLGKVLAPDPLPWDTFSAFVRTTNRAMPPFSEKVLPNEDLVDIYAYLSSIPKGKDYKSIPLLNQ 127
BLAST of mRNA_P-wetherbeei_contig51972.1.1 vs. uniprot
Match: A0A1Q7B4E5_9PROT (Cytochrome c domain-containing protein n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7B4E5_9PROT) HSP 1 Score: 139 bits (349), Expect = 2.230e-40 Identity = 68/109 (62.39%), Postives = 81/109 (74.31%), Query Frame = 1
Query: 31 VAIVASLGLGQGAALAASADKGKKLYVQYGCWGCHGFEGQGSVATSGGKVLAPEPMAWETFESFVRTTNRTMPPYRESVLPKADLEDIYAFLQTIPKPKDYKSIPLLNQ 357
+A+ A L L G A AASA+KGK Y+Q+GCW CHG + QG+ G LAPEPM ETF +FVRTTNRTMPPY E++LP DL DI+A+L+TIPKP DYK IPLLNQ
Sbjct: 1 MALAAGLLLSCGGAFAASAEKGKAAYIQHGCWQCHGMQAQGAAT---GPKLAPEPMPLETFTAFVRTTNRTMPPYAEAILPNEDLADIHAYLETIPKPADYKDIPLLNQ 106
BLAST of mRNA_P-wetherbeei_contig51972.1.1 vs. uniprot
Match: A0A1Q7BLJ7_9PROT (Cytochrome c domain-containing protein n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BLJ7_9PROT) HSP 1 Score: 137 bits (345), Expect = 1.190e-39 Identity = 68/111 (61.26%), Postives = 80/111 (72.07%), Query Frame = 1
Query: 25 GLVAIVASLGLGQGAALAASADKGKKLYVQYGCWGCHGFEGQGSVATSGGKVLAPEPMAWETFESFVRTTNRTMPPYRESVLPKADLEDIYAFLQTIPKPKDYKSIPLLNQ 357
G A+ A L LG G A AASA+KGK Y Q+GCW CHG + QG + G LAP+P+ E F +FVRTTNR MPPY E++LP DL DI+A+LQTIPKP DYKSIPLLNQ
Sbjct: 8 GPAALAAGLALGCGGAFAASAEKGKTAYTQHGCWQCHGMQAQGGLT---GPKLAPDPIPIEAFTAFVRTTNRAMPPYSEAILPNDDLADIHAYLQTIPKPADYKSIPLLNQ 115
BLAST of mRNA_P-wetherbeei_contig51972.1.1 vs. uniprot
Match: A0A537SSQ3_9PROT (Cytochrome c n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SSQ3_9PROT) HSP 1 Score: 133 bits (335), Expect = 3.950e-38 Identity = 69/114 (60.53%), Postives = 81/114 (71.05%), Query Frame = 1
Query: 16 IKLGLVAIVASLGLGQGAALAASADKGKKLYVQYGCWGCHGFEGQGSVATSGGKVLAPEPMAWETFESFVRTTNRTMPPYRESVLPKADLEDIYAFLQTIPKPKDYKSIPLLNQ 357
+ LG + A L L G A+AASA+KGK ++Q+GCW CHG EGQG A G LAPEPM ETF +FVRT+NRTMPPY E+VL DL DI+A+LQ IPK DYK IPLLNQ
Sbjct: 5 LGLGPAVLAAGLLLSSGGAIAASAEKGKAAFIQHGCWQCHGTEGQGGQA---GARLAPEPMPLETFTAFVRTSNRTMPPYPEAVLSNEDLADIHAYLQAIPKRADYKDIPLLNQ 115
BLAST of mRNA_P-wetherbeei_contig51972.1.1 vs. uniprot
Match: A0A537NNT8_9PROT (Cytochrome c n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NNT8_9PROT) HSP 1 Score: 130 bits (327), Expect = 6.500e-37 Identity = 67/115 (58.26%), Postives = 84/115 (73.04%), Query Frame = 1
Query: 13 GIKLGLVAIVASLGLGQGAALAASADKGKKLYVQYGCWGCHGFEGQGSVATSGGKVLAPEPMAWETFESFVRTTNRTMPPYRESVLPKADLEDIYAFLQTIPKPKDYKSIPLLNQ 357
G L L A+ A L GAA AASA+KGK +VQ+GCW CHGF+GQG+ G LAP+P+ E F +FVRTT+R+MPPY E+VL +L DI+A+LQ+IPKP DYKS+PLLNQ
Sbjct: 4 GTLLALAALAAGAMLHNGAADAASAEKGKAAFVQHGCWQCHGFQGQGANT---GPKLAPDPIPIEPFTAFVRTTDRSMPPYTEAVLSNEELADIHAYLQSIPKPADYKSLPLLNQ 115
BLAST of mRNA_P-wetherbeei_contig51972.1.1 vs. uniprot
Match: A0A6N7GUB7_9HYPH (C-type cytochrome n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GUB7_9HYPH) HSP 1 Score: 127 bits (318), Expect = 1.520e-35 Identity = 68/113 (60.18%), Postives = 82/113 (72.57%), Query Frame = 1
Query: 19 KLGLVAIVASLGLGQGAALAASADKGKKLYVQYGCWGCHGFEGQGSVATSGGKVLAPEPMAWETFESFVRTTNRTMPPYRESVLPKADLEDIYAFLQTIPKPKDYKSIPLLNQ 357
+ L AI A L LG GA +AS +KGK+L+V+ GCW CHGF GQG VA G LAP M E SFVR +NR MPPYRE+VLP+ADL++I+A+L +IPKP D KSIPLLNQ
Sbjct: 7 RFALAAIAAGLVLGFGAGASAS-EKGKQLFVKNGCWQCHGFVGQGGVA---GPALAPNVMPVEAMSSFVRNSNRAMPPYREAVLPEADLKEIHAYLTSIPKPADPKSIPLLNQ 115
BLAST of mRNA_P-wetherbeei_contig51972.1.1 vs. uniprot
Match: A0A534W1E5_9DELT (Cytochrome c n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534W1E5_9DELT) HSP 1 Score: 126 bits (316), Expect = 2.970e-35 Identity = 63/109 (57.80%), Postives = 79/109 (72.48%), Query Frame = 1
Query: 28 LVAIVASLGLGQGAALAASADKGKKLYVQYGCWGCHGFEGQGSVATSGGKVLAPEPMAWETFESFVRTTNRTMPPYRESVLPKADLEDIYAFLQTIPKPKDYKSIPLLN 354
L AIVA L L A A SA+KGK YV++GCW CHGF+GQGSVA G +AP PM +E F FVRTT+ MPPY++++L DL DIYA+LQ++PK +D K+IPLLN
Sbjct: 8 LAAIVAGLVLTSSVAAAGSAEKGKAAYVRHGCWQCHGFDGQGSVA---GSKIAPNPMPFEAFSDFVRTTSGAMPPYQKAILSDDDLADIYAYLQSVPKARDPKTIPLLN 113
BLAST of mRNA_P-wetherbeei_contig51972.1.1 vs. uniprot
Match: A0A537P639_9PROT (Cytochrome c n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537P639_9PROT) HSP 1 Score: 125 bits (315), Expect = 5.860e-35 Identity = 70/120 (58.33%), Postives = 84/120 (70.00%), Query Frame = 1
Query: 4 TSMGIKLGLVAIVASLG--LGQGAALAASADKGKKLYVQYGCWGCHGFEGQGSVATSGGKVLAPEPMAWETFESFVRTTNRTMPPYRESVLPKADLEDIYAFLQTIPKPKDYKSIPLLNQ 357
+SM GLV V + G L G A AASA+KGK ++Q+GCW CHG +GQGS A G LAP+ M ETF +FVRTTNR MPPY E++L DLEDI+A+LQTIPKP + SIPLLNQ
Sbjct: 11 SSMRSVRGLVPAVLAAGVLLSCGGAFAASAEKGKAAFIQHGCWQCHGMQGQGSTA---GPKLAPDAMPIETFTAFVRTTNRAMPPYSEAILSNGDLEDIHAYLQTIPKPAE--SIPLLNQ 125
BLAST of mRNA_P-wetherbeei_contig51972.1.1 vs. uniprot
Match: A0A536WJY0_9PROT (Cytochrome c n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536WJY0_9PROT) HSP 1 Score: 120 bits (301), Expect = 5.030e-33 Identity = 59/108 (54.63%), Postives = 75/108 (69.44%), Query Frame = 1
Query: 31 VAIVASLGLGQGAALAASADKGKKLYVQYGCWGCHGFEGQGSVATSGGKVLAPEPMAWETFESFVRTTNRTMPPYRESVLPKADLEDIYAFLQTIPKPKDYKSIPLLN 354
V ++A LG Q A A SA+KGK Y Q+GCW CHGF GQG + G LAP+PM E +FVR T MPPY++++L ADL DI+A+LQ++PK +DYKSIPLLN
Sbjct: 5 VLLLAVLGASQAALAAGSAEKGKTAYAQHGCWQCHGFAGQGGIT---GPKLAPDPMPLEALLAFVRNTRGAMPPYQKAILSDADLADIHAYLQSLPKARDYKSIPLLN 109
BLAST of mRNA_P-wetherbeei_contig51972.1.1 vs. uniprot
Match: A0A537BK92_9PROT (Cytochrome c n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BK92_9PROT) HSP 1 Score: 119 bits (298), Expect = 1.440e-32 Identity = 59/106 (55.66%), Postives = 74/106 (69.81%), Query Frame = 1
Query: 37 IVASLGLGQGAALAASADKGKKLYVQYGCWGCHGFEGQGSVATSGGKVLAPEPMAWETFESFVRTTNRTMPPYRESVLPKADLEDIYAFLQTIPKPKDYKSIPLLN 354
+VA L Q A A SADKGK + ++GCW CHGF GQG VA G LAP+PM E +FVR T MPPY++++L ADL DI+A+LQ++PK +DYKSIPLLN
Sbjct: 7 LVAVLSASQAALAAGSADKGKTAFAKHGCWQCHGFAGQGGVA---GPKLAPDPMPLEAMSAFVRNTRGGMPPYQKAILSDADLADIHAYLQSLPKARDYKSIPLLN 109 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51972.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig51972.1.1 >prot_P-wetherbeei_contig51972.1.1 ID=prot_P-wetherbeei_contig51972.1.1|Name=mRNA_P-wetherbeei_contig51972.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=120bp MTSMGIKLGLVAIVASLGLGQGAALAASADKGKKLYVQYGCWGCHGFEGQback to top mRNA from alignment at P-wetherbeei_contig51972:165..524- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig51972.1.1 ID=mRNA_P-wetherbeei_contig51972.1.1|Name=mRNA_P-wetherbeei_contig51972.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=360bp|location=Sequence derived from alignment at P-wetherbeei_contig51972:165..524- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig51972:165..524- >mRNA_P-wetherbeei_contig51972.1.1 ID=mRNA_P-wetherbeei_contig51972.1.1|Name=mRNA_P-wetherbeei_contig51972.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=360bp|location=Sequence derived from alignment at P-wetherbeei_contig51972:165..524- (Phaeothamnion wetherbeei SAG_119_79)back to top |