mRNA_P-wetherbeei_contig5195.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5195.1.1 vs. uniprot
Match: D7FYT0_ECTSI (Tub domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYT0_ECTSI) HSP 1 Score: 238 bits (608), Expect = 6.080e-72 Identity = 130/253 (51.38%), Postives = 171/253 (67.59%), Query Frame = 1
Query: 1 RSSGARRGPGFLGKLRLTGAA--EYVLYDGGESPVAAANLNALRSAYAGTASSGGSGLGNTGNSSLMNDDETAM--LRQELAVVTYDFDRKAGKT-KRRMEVALPKLNNGAE---PEVWRPADTRSGMAPSFGRVRYQGAQNLLLAERLFVMHQRESRYDALSSCLVDFKGRATAASVKNFQLIKSTPENSLNRLRYYSEADGRFEDSADDAPRAVLLQMGKVGKNCFNVDIQHPLSPLQAFAICLSRFDTNA 735
+ +G R G FL KLR + A EY LYD G++P AA+ +L S S + + + +L N + +R+EL V+ Y+FD+K +T KRRMEVA+P+L + P W+P+DT+ M +FGR+RYQGAQN L +RL + HQRESRYD LSSCLVD++GRATA SVKNFQL+KS PE+++ R RY+SE G+ + +DD PR V LQMGKVGK+CFNVD++ PLS LQ FAICLSRFD A
Sbjct: 303 KDNGKRGGNSFLAKLRASSVAHTEYALYDRGDNPAVAASETSLDSGAEAKPKSMRNPIDLARSKTLRNQERHGQGEVRRELGVIIYNFDKKEQRTGKRRMEVAIPQLEQEGDSWKPVSWQPSDTKESMINNFGRLRYQGAQNFLQDDRLLIFHQRESRYDPLSSCLVDYRGRATAPSVKNFQLLKSPPEDNVKRARYFSEGGGKNDVESDDIPRPVFLQMGKVGKDCFNVDLEWPLSVLQGFAICLSRFDAQA 555
BLAST of mRNA_P-wetherbeei_contig5195.1.1 vs. uniprot
Match: A0A6V1N906_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N906_HETAK) HSP 1 Score: 189 bits (480), Expect = 4.550e-55 Identity = 120/246 (48.78%), Postives = 151/246 (61.38%), Query Frame = 1
Query: 31 FLGKLR-LTGAAEYVLYDGGESPVAAANLNALRSAYAGTASSGGSGLGNTGNSSLMNDDETAMLRQELAVVTYDFDRKAGKTKRRMEVALPKLNNGAEP----------EVWRPADTRSGMAPSFGRVRYQGAQNLLLAERLFVMHQRESRYDALSSCLVDFKGRATAASVKNFQLIKSTPENSLNRLRYYSEA-DGRFEDSADDAPRAVLLQMGKVGKNCFNVDIQHPLSPLQAFAICLSRFDTN 732
+LGKLR T EYVLYD GE+P A N S G + G+GLG NS M D R+EL VV Y ++K RRMEV LP+L A+P E WRP + +A F RVR +G QN++ ++RL V H+RESRYD LSSCLVDFKGRA ASVKN+QL++S P + + +++S +G E ++A R VLLQMGK GK+CFN+D Q PL+ LQAF ICLSRFDT
Sbjct: 109 YLGKLRGNTTQTEYVLYDSGENPSARRNETDSESDGEGRRADHGAGLGPRQNS--MAGDN----REELIVVHYVPEKKTDGL-RRMEVGLPRLQYYADPHHPNGGQWVAENWRPQREANTLANKFARVRQEGGQNVVASDRLLVAHKRESRYDPLSSCLVDFKGRARQASVKNYQLVRSWPTDRNMQRQFFSPGGEGAGETDDEEAARPVLLQMGKFGKDCFNMDYQWPLTMLQAFGICLSRFDTK 347
BLAST of mRNA_P-wetherbeei_contig5195.1.1 vs. uniprot
Match: A0A6U1Q8W6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1Q8W6_9STRA) HSP 1 Score: 155 bits (391), Expect = 2.760e-44 Identity = 75/137 (54.74%), Postives = 99/137 (72.26%), Query Frame = 1
Query: 325 EVWRPADTRSGMAPSFGRVRYQGAQNLLLAERLFVMHQRESRYDALSSCLVDFKGRATAASVKNFQLIKSTPENSLNRLRYYSEA-DGRFEDSADDAPRAVLLQMGKVGKNCFNVDIQHPLSPLQAFAICLSRFDTN 732
E W+ + F R+R QG+QN++ A+++ V+H+RESRYD LSSCLVDFKGRA ASVKN+QLIKS P ++++Y+ + +G E D+AP+ VLLQMGK G++CFN+D Q P S LQAFAICLSRFDT
Sbjct: 5 EAWQAQRYNDTLQAQFERIRMQGSQNVVNADKILVLHKRESRYDPLSSCLVDFKGRARQASVKNYQLIKSPPSEPEFKMQFYNPSGEGADEVDDDEAPKPVLLQMGKFGRDCFNMDYQWPFSMLQAFAICLSRFDTK 141
BLAST of mRNA_P-wetherbeei_contig5195.1.1 vs. uniprot
Match: A0A7S3UXH4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXH4_HETAK) HSP 1 Score: 153 bits (387), Expect = 2.250e-43 Identity = 76/137 (55.47%), Postives = 98/137 (71.53%), Query Frame = 1
Query: 325 EVWRPADTRSGMAPSFGRVRYQGAQNLLLAERLFVMHQRESRYDALSSCLVDFKGRATAASVKNFQLIKSTPENSLNRLRYYSEA-DGRFEDSADDAPRAVLLQMGKVGKNCFNVDIQHPLSPLQAFAICLSRFDTN 732
E WRP + +A F RVR +G QN++ ++RL V H+RESRYD LSSCLVDFKGRA ASVKN+QL++S P + + +++S +G E ++A R VLLQMGK GK+CFN+D Q PL+ LQAF ICLSRFDT
Sbjct: 28 ENWRPQREANTLANKFARVRQEGGQNVVASDRLLVAHKRESRYDPLSSCLVDFKGRARQASVKNYQLVRSWPTDRNMQRQFFSPGGEGAGETDDEEAARPVLLQMGKFGKDCFNMDYQWPLTMLQAFGICLSRFDTK 164
BLAST of mRNA_P-wetherbeei_contig5195.1.1 vs. uniprot
Match: F0YIF3_AURAN (Tub domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIF3_AURAN) HSP 1 Score: 164 bits (416), Expect = 8.500e-43 Identity = 106/256 (41.41%), Postives = 140/256 (54.69%), Query Frame = 1
Query: 31 FLGKLRLTGA-AEYVLYDGGESPVAAANLNALRSAYAGTASSGGSGLGNTGNSSLMNDDETAMLRQELAVVTYDFDRKAGKTKRRMEVALPK-----------------LNNGAEPEV-WRPADTRSGMAPSFGRVRYQGAQNLLLAERLFVMHQRESRYDALSSCLVDFKGRATAASVKNFQLIKSTPENSLNRLRYYSEA-DGRFEDSADDAPRAVLLQMGKVGKNCFNVDIQHPLSPLQAFAICLSRFDTNAA 738
+LGKLR GA +EY L+ G+ P A A A AG G D R E+A V + R A RRMEVA+P+ L++G +RPA + + + + QGAQN+L A+R+ V+H RES+YD LSSCLVDFK RA ASVKNFQL+KS+P + Y++ +G E+ DA + ++LQMGKVGKNCFN+D Q P+S LQAFA C++RFDT A
Sbjct: 640 YLGKLRANGATSEYTLFSAGDKPPAGA-------AGAGARPPRG--------------DPPGDARCEMAAVAFSSKRSAPTNPRRMEVAVPQTRWRPRNADDGPRHDDDLDDGVVAVASFRPARDQDSLCHTLNLAQGQGAQNVLHADRIAVLHMRESKYDPLSSCLVDFKARANMASVKNFQLVKSSPVEDHMKKEYFAPGGEGARENPNPDAAQPIILQMGKVGKNCFNMDYQFPMSMLQAFATCIARFDTRVA 874
BLAST of mRNA_P-wetherbeei_contig5195.1.1 vs. uniprot
Match: A0A7S4ED20_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ED20_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.050e-39 Identity = 75/138 (54.35%), Postives = 95/138 (68.84%), Query Frame = 1
Query: 331 WRPADTRSGMAPSFGRVRYQGAQNLLLAERLFVMHQRESRYDALSSCLVDFKGRATAASVKNFQLIKSTPENSLNRLRYYSEADGRFEDSADD-APRAVLLQMGKVGKNCFNVDIQHPLSPLQAFAICLSRFDTNAAL 741
+RPA+ +G+ +F VR +GAQN+L A+ ++V H R S+YD LSSCLVDF+ RA ASVKNFQL+ S P + R YY + DG ADD A V+LQMGKVGK+CFN+D P S LQAFA+CL+RFDT L
Sbjct: 20 FRPAEPAAGLRHAFDVVRGRGAQNVLDADSVYVAHARTSKYDPLSSCLVDFRARAAVASVKNFQLVASAPVEAHERRAYY-DRDGEGRGLADDDAALPVVLQMGKVGKDCFNMDYTFPFSMLQAFAVCLARFDTGVPL 156
BLAST of mRNA_P-wetherbeei_contig5195.1.1 vs. uniprot
Match: A0A836C912_9STRA (Tubby C-terminal-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C912_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.870e-39 Identity = 93/207 (44.93%), Postives = 116/207 (56.04%), Query Frame = 1
Query: 262 AGKTK----RRMEVALPKLNN----------------------GAEPE--VWRPADTRSGMAPSFGRVRYQGAQNLLLAERLFVMHQRESRYDALSSCLVDFKGRATAASVKNFQLIKSTPENSLNRLRYY---------------------SEADGRFEDSADDAPRAVLLQMGKVGKNCFNVDIQHPLSPLQAFAICLSRFDTNA 735
AGK K RRMEVA+P++ G E + VWRP + MA F VR +G QN L+++R+ V+HQRESRYD LSSCLVDFKGRA+ ASV+NFQLI STP ++ R R +E G AD AV+LQ+GK+ NC+N+D+Q PLS LQAFAICLSRFDT+A
Sbjct: 620 AGKAKADFCRRMEVAVPQVRQRVIHQPTHQQSSEASATSEVGQGWEDDMSVWRPVEVADSMAAQFRHVRRKGGQNFLVSDRMLVLHQRESRYDPLSSCLVDFKGRASTASVRNFQLIMSTPTHNATRARLSLAAVETATPGSPNAQPALGQAAEGAGAAVVEADSVCNAVVLQLGKISANCYNMDLQAPLSILQAFAICLSRFDTSA 826
BLAST of mRNA_P-wetherbeei_contig5195.1.1 vs. uniprot
Match: H3GWQ0_PHYRM (Tub domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWQ0_PHYRM) HSP 1 Score: 150 bits (380), Expect = 6.240e-38 Identity = 98/239 (41.00%), Postives = 129/239 (53.97%), Query Frame = 1
Query: 31 FLGKLRL-TGAAEYVLYDGGESPVAAANLNALRSAYAGTASSGGSGLGNTGNSSLMNDDETAMLRQELAVVTYDFDRKAGKTKRRMEVALPK-LNNGAEPEVWRPADTRSGMAPSFGRVRYQGAQNLLLAERLFVMHQRESRYDALSSCLVDFKGRATAASVKNFQLIKSTPENSLNRLRYYSE-ADGRFEDSAD-DAPRA-VLLQMGKVGKNCFNVDIQHPLSPLQAFAICLSRFDTN 732
++GKLR T EY LYD G++P + + ++D+ +R ELAVV Y + +K R+MEV +P L NGA WRP M + G QN++ A +H+RE++YD LSSC+VDF+ RAT SVKNFQL+ S P N R +Y D +ED P+ VLLQ+GKVGK+CFN+D Q+PLS LQAFAI LSRFDT
Sbjct: 671 YIGKLRSSTSMMEYSLYDQGDNPE------------------------DLDSDCEVDDEIRQSIRAELAVVRYHYSKKP--YPRKMEVVIPSILENGAGYLEWRPLSRDQMMEEHVRNIAAAGGQNVMDASNFVFLHKRETKYDPLSSCIVDFRSRATCVSVKNFQLVHSEPTNEQMREQYRKNYPDFLYEDQGTVSLPQEHVLLQLGKVGKDCFNMDFQYPLSMLQAFAISLSRFDTK 883
BLAST of mRNA_P-wetherbeei_contig5195.1.1 vs. uniprot
Match: A0A2P4XSK2_9STRA (Tubby-like protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSK2_9STRA) HSP 1 Score: 147 bits (371), Expect = 8.410e-37 Identity = 96/239 (40.17%), Postives = 130/239 (54.39%), Query Frame = 1
Query: 31 FLGKLRL-TGAAEYVLYDGGESPVAAANLNALRSAYAGTASSGGSGLGNTGNSSLMNDDETAMLRQELAVVTYDFDRKAGKTKRRMEVALPK-LNNGAEPEVWRPADTRSGMAPSFGRVRYQGAQNLLLAERLFVMHQRESRYDALSSCLVDFKGRATAASVKNFQLIKSTPENSLNRLRYY-SEADGRFEDSAD-DAPRA-VLLQMGKVGKNCFNVDIQHPLSPLQAFAICLSRFDTN 732
++GKLR T EY LYD G++P + + ++D+ +R ELAV+ Y + +K R+MEV +P L+NG WRP M + G QN++ A +H+RE++YD LSSC+VDF+ RAT SVKNFQL+ S P N R +Y S D ++D P+ VLLQ+GKVGK+CFN+D Q+PLS LQAFAI LSRFDT
Sbjct: 559 YIGKLRSSTNMMEYSLYDQGDNPE------------------------DLDSDCEVDDELRQSIRAELAVIRYHYSKKP--YPRKMEVVIPSILDNGQGYLEWRPLSRDQMMEEHVRNITAAGGQNVMDATNFVFLHKRETKYDPLSSCIVDFRSRATCVSVKNFQLVHSEPTNEQMRDQYRKSYPDFVYDDQGTVSLPQEYVLLQLGKVGKDCFNMDFQYPLSMLQAFAISLSRFDTK 771
BLAST of mRNA_P-wetherbeei_contig5195.1.1 vs. uniprot
Match: A0A225WL04_9STRA (Tub domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WL04_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.550e-36 Identity = 95/239 (39.75%), Postives = 130/239 (54.39%), Query Frame = 1
Query: 31 FLGKLRL-TGAAEYVLYDGGESPVAAANLNALRSAYAGTASSGGSGLGNTGNSSLMNDDETAMLRQELAVVTYDFDRKAGKTKRRMEVALPKLN-NGAEPEVWRPADTRSGMAPSFGRVRYQGAQNLLLAERLFVMHQRESRYDALSSCLVDFKGRATAASVKNFQLIKSTPENSLNRLRYY-SEADGRFEDSAD-DAPRA-VLLQMGKVGKNCFNVDIQHPLSPLQAFAICLSRFDTN 732
++GKLR T EY LYD G++P + + ++D+ +R ELAV+ Y + +K R+MEV +P ++ NG WRP M + G QN++ A +H+RE++YD LSSC+VDF+ RAT SVKNFQL+ S P N R +Y S D ++D P+ VLLQ+GKVGK+CFN+D Q+PLS LQAFAI LSRFDT
Sbjct: 553 YIGKLRSSTNLMEYSLYDQGDNPE------------------------DLDSDCEVDDELRQSIRAELAVIRYHYTKKP--YPRKMEVVIPSISDNGQGYLEWRPLSRDQMMEEHVRNITAAGGQNVMDANNFVFLHKRETKYDPLSSCIVDFRSRATCVSVKNFQLVHSEPTNEQMRDQYRKSYPDFVYDDQGTVSLPQEYVLLQLGKVGKDCFNMDFQYPLSMLQAFAISLSRFDTK 765 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5195.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5195.1.1 >prot_P-wetherbeei_contig5195.1.1 ID=prot_P-wetherbeei_contig5195.1.1|Name=mRNA_P-wetherbeei_contig5195.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=248bp RSSGARRGPGFLGKLRLTGAAEYVLYDGGESPVAAANLNALRSAYAGTASback to top mRNA from alignment at P-wetherbeei_contig5195:64..2461+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5195.1.1 ID=mRNA_P-wetherbeei_contig5195.1.1|Name=mRNA_P-wetherbeei_contig5195.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2398bp|location=Sequence derived from alignment at P-wetherbeei_contig5195:64..2461+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5195:64..2461+ >mRNA_P-wetherbeei_contig5195.1.1 ID=mRNA_P-wetherbeei_contig5195.1.1|Name=mRNA_P-wetherbeei_contig5195.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=744bp|location=Sequence derived from alignment at P-wetherbeei_contig5195:64..2461+ (Phaeothamnion wetherbeei SAG_119_79)back to top |