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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 2918 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 1998 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186779.2466714-UTR-P-wetherbeei_contig5194:1049..1334 | 1683186779.2466714-UTR-P-wetherbeei_contig5194:1049..1334 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig5194 1050..1334 + |
| 1683186779.2722964-UTR-P-wetherbeei_contig5194:3332..3967 | 1683186779.2722964-UTR-P-wetherbeei_contig5194:3332..3967 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig5194 3333..3967 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186779.2612426-CDS-P-wetherbeei_contig5194:1334..3332 | 1683186779.2612426-CDS-P-wetherbeei_contig5194:1334..3332 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig5194 1335..3332 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5194.1.1 >prot_P-wetherbeei_contig5194.1.1 ID=prot_P-wetherbeei_contig5194.1.1|Name=mRNA_P-wetherbeei_contig5194.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=666bp
MYCVESGRLLHRLTVVVTPATKASATATTGTATASVAPATAPAAIPAEAA
AADPAAAVTCLALNPQDPRHVVLGSRGGVLRVWMPAASHGTPSLLAVDLN
RQTRAGTGSGARKLSVASPHPILAVAFSARGDRIFVVQAQLAPAAATDAD
GGSTSADSSNTGITDSSGGHDCSGCHDGSGFVCVYVFATATGACIAMARD
VAAAPSVRSIRVGKSHRSRASAAAIQRERLAPRHGGWGGGYDGGYKDSGD
DGGCGKPRRGGGMGCPRGWEVTVLYGSSWAQHVGVTICGDSPGGGGCGSG
DSSSTLSAGGCGSGSGGRGRAVSEFSDSDSTVPGSIDLVQVFSSARTTAS
SQLGATDRGSGGKSSGGKSSGGKSGGGGGKSGGFGGKSGADFKSGSLGRP
TSQDTVSTGSASSPGLFASSPSAAVGAVAFGCFIAPPPPPAADATDADDG
SSCSGGDRSFASGGDRSFASGGGNYSEILPMWDARELGLPLLHRVRWELV
ILRRLCQDRRAQALAAPTPVRTGSGPSGGTTGKKNRALKAGGTNAAPGAG
PSKAPAGKKQSKQQQHPLQHKLSLLAALFSCGFGPRRPARPTVVPATQED
GDERMSRRCRRRLLRPPPPPSKSASASARALAALEAATLGEGVGGATARA
LVLETRPFRLVVSFL* back to topmRNA from alignment at P-wetherbeei_contig5194:1050..3967+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig5194.1.1 ID=mRNA_P-wetherbeei_contig5194.1.1|Name=mRNA_P-wetherbeei_contig5194.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2918bp|location=Sequence derived from alignment at P-wetherbeei_contig5194:1050..3967+ (Phaeothamnion wetherbeei SAG_119_79)
ATCACGGCGGCGGCGCTTCTGCCTGGCGGCGCCCTCATCGCCACAGCGGC
GGTTCTGCCGGGGACGCCCAAGGCGCCCCCAACCGTCCGGCTGTGGTCCC
GTGAGGCCAAGACGCTGCTGCGGACGTTCCAGGCGGCGCCCGGCGAACGC
TCCGTCGGGTACGGCATCTTCGGCCACGGGCTGGACGGCGCTCCGACCGC
CGCCCTCCGCAGCCCGGCGACGATACTAGCAACTTCGGCCGACGGCGGCG
TCGTCGTCGTCGGCAGCCGCAGCGGCGAGGCTGTCATGTACTGCGTCGAG
AGCGGCCGCCTCCTCCACCGGCTGACCGTCGTCGTGACCCCAGCAACCAA
GGCTTCTGCCACTGCCACCACCGGCACTGCCACTGCCAGTGTTGCACCCG
CGACGGCTCCGGCTGCCATTCCCGCCGAAGCTGCTGCTGCAGACCCCGCC
GCCGCCGTGACCTGCCTGGCGCTGAACCCGCAGGACCCGCGGCACGTCGT
GCTCGGCTCCCGCGGCGGCGTGCTGCGCGTTTGGATGCCGGCGGCGTCGC
ATGGCACACCAAGCCTCCTAGCTGTCGACCTCAACCGCCAGACCCGCGCC
GGAACCGGATCCGGAGCCCGCAAGTTGTCCGTGGCATCGCCGCACCCCAT
CCTCGCCGTGGCCTTCTCGGCGCGCGGCGACCGCATCTTTGTCGTGCAGG
CGCAGCTGGCTCCCGCCGCCGCCACCGACGCCGACGGCGGCAGCACTTCC
GCCGACAGCAGCAATACCGGCATCACGGACAGCAGCGGCGGCCACGACTG
CAGCGGCTGCCACGACGGCAGCGGCTTCGTCTGTGTGTACGTCTTTGCGA
CTGCCACCGGCGCCTGCATCGCCATGGCGCGCGACGTCGCCGCCGCGCCG
TCGGTGCGCTCCATCCGCGTCGGAAAGTCGCACCGCTCGCGGGCCTCCGC
CGCCGCCATTCAGCGCGAACGGCTGGCGCCCCGTCACGGCGGCTGGGGCG
GTGGCTATGACGGCGGTTACAAGGACAGCGGCGACGACGGCGGGTGCGGC
AAGCCGCGCCGCGGCGGCGGCATGGGGTGCCCGCGTGGCTGGGAAGTGAC
GGTGCTCTACGGCTCGTCGTGGGCGCAGCACGTCGGCGTCACAATCTGCG
GCGATAGTCCCGGCGGCGGCGGCTGTGGCAGCGGCGACAGCAGCAGTACT
CTCAGCGCCGGCGGCTGCGGCAGCGGCAGCGGCGGCCGGGGACGGGCGGT
GAGCGAGTTCTCCGACTCTGACAGCACGGTGCCTGGCAGCATCGACCTCG
TTCAGGTCTTCTCCTCTGCCCGCACAACGGCATCTTCCCAGCTCGGCGCG
ACGGACCGAGGCAGCGGCGGCAAGAGCAGCGGCGGCAAGAGCAGCGGCGG
CAAAAGTGGCGGCGGCGGTGGCAAGAGTGGCGGCTTCGGCGGTAAGAGCG
GTGCCGATTTCAAGAGCGGCTCGCTAGGCCGGCCGACATCGCAGGACACC
GTCTCGACCGGCTCCGCCTCGTCGCCGGGGCTCTTTGCTTCGTCGCCTTC
CGCCGCCGTGGGTGCCGTGGCTTTCGGCTGCTTCATCGCGCCGCCGCCGC
CGCCAGCCGCCGATGCCACCGACGCCGACGATGGCAGCTCTTGCAGCGGC
GGCGACCGCAGCTTTGCCAGCGGCGGCGACCGCAGCTTTGCCAGCGGCGG
CGGCAACTACAGCGAGATTCTGCCCATGTGGGACGCCCGCGAGCTTGGGC
TGCCGCTGCTTCACCGGGTGCGCTGGGAGCTGGTGATTCTCCGCCGCCTC
TGCCAGGACCGACGCGCGCAGGCGCTGGCAGCGCCAACGCCGGTCCGGAC
CGGAAGCGGTCCCTCCGGCGGCACCACAGGCAAGAAGAACCGCGCGCTGA
AGGCTGGCGGCACAAACGCCGCGCCCGGAGCCGGGCCATCCAAGGCACCA
GCTGGCAAGAAACAGAGCAAGCAGCAGCAGCACCCGCTGCAGCACAAGCT
GTCGCTCCTCGCCGCCCTCTTCTCGTGCGGCTTTGGGCCGCGGCGCCCGG
CGCGCCCGACGGTGGTGCCGGCGACGCAGGAGGACGGTGATGAGAGGATG
TCCCGGCGGTGCCGGCGGCGGTTGCTGCGGCCGCCGCCGCCACCTTCCAA
GTCGGCATCGGCATCGGCACGAGCGCTGGCGGCGCTGGAGGCGGCAACGC
TCGGGGAGGGCGTGGGCGGCGCAACGGCCCGGGCGCTGGTGCTGGAGACG
CGCCCCTTCCGCCTGGTGGTCTCCTTCCTCTGAGGGAACAAAAACCCGCC
GGGGCTGAATGGCCGGCCCGTTGGCTGGCTCATTTGCTTGCCGGATCTCT
GCTTGCGGGCTTTCTGTCGACTCGCGGAGGCCTCAGCATTGCGTCCTTTT
CACGTGTACAAAACGACGAAAAGGAATCGACTAGCGAGTCTACCGCAGCG
ATTCCGCAGATCGCGGCGCTGTTCTGAGCGTCCTGGCACACCCCAACCGT
GGTCGGCGCGGGGCGGCGGGCCTCCACACTGGGACTGACAGCGGCGAGCG
GGCCTTGTGCTCGATTGGGCCATTGTCTATCCATGAGCGGCGATGCGGTG
ACAGCAGAAGGGCGATGGCGGCGGCGGTTGTGCACAGATTTGTGTATTTA
GCCTTTTGGAACGGCCTCACTCGAGGATCGTACCTTCTGCATTTGGAGAC
CTGGGTTAGGATGTGTTAGCAATGAGCTTTCAGCTTCAGGACGTACATGG
ACGGAACAGGTATCCGTAGCAAGGAGCCCGACAGCGGCGCGCTCTCAGGG
ATTACGGGGCGGCGAGGCATCAGAAGAAGTACTGCGCCAGCGGAGACGAT
GTCGGATGCCCCCTACTTTTAGAGTCCGCCCAGCGAATAACCACCTTTTT
TAGAGTCCGCCTGTAGTG back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig5194:1050..3967+ >mRNA_P-wetherbeei_contig5194.1.1 ID=mRNA_P-wetherbeei_contig5194.1.1|Name=mRNA_P-wetherbeei_contig5194.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1998bp|location=Sequence derived from alignment at P-wetherbeei_contig5194:1050..3967+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTACTGCGTCGAGAGCGGCCGCCTCCTCCACCGGCTGACCGTCGTCGT
GACCCCAGCAACCAAGGCTTCTGCCACTGCCACCACCGGCACTGCCACTG
CCAGTGTTGCACCCGCGACGGCTCCGGCTGCCATTCCCGCCGAAGCTGCT
GCTGCAGACCCCGCCGCCGCCGTGACCTGCCTGGCGCTGAACCCGCAGGA
CCCGCGGCACGTCGTGCTCGGCTCCCGCGGCGGCGTGCTGCGCGTTTGGA
TGCCGGCGGCGTCGCATGGCACACCAAGCCTCCTAGCTGTCGACCTCAAC
CGCCAGACCCGCGCCGGAACCGGATCCGGAGCCCGCAAGTTGTCCGTGGC
ATCGCCGCACCCCATCCTCGCCGTGGCCTTCTCGGCGCGCGGCGACCGCA
TCTTTGTCGTGCAGGCGCAGCTGGCTCCCGCCGCCGCCACCGACGCCGAC
GGCGGCAGCACTTCCGCCGACAGCAGCAATACCGGCATCACGGACAGCAG
CGGCGGCCACGACTGCAGCGGCTGCCACGACGGCAGCGGCTTCGTCTGTG
TGTACGTCTTTGCGACTGCCACCGGCGCCTGCATCGCCATGGCGCGCGAC
GTCGCCGCCGCGCCGTCGGTGCGCTCCATCCGCGTCGGAAAGTCGCACCG
CTCGCGGGCCTCCGCCGCCGCCATTCAGCGCGAACGGCTGGCGCCCCGTC
ACGGCGGCTGGGGCGGTGGCTATGACGGCGGTTACAAGGACAGCGGCGAC
GACGGCGGGTGCGGCAAGCCGCGCCGCGGCGGCGGCATGGGGTGCCCGCG
TGGCTGGGAAGTGACGGTGCTCTACGGCTCGTCGTGGGCGCAGCACGTCG
GCGTCACAATCTGCGGCGATAGTCCCGGCGGCGGCGGCTGTGGCAGCGGC
GACAGCAGCAGTACTCTCAGCGCCGGCGGCTGCGGCAGCGGCAGCGGCGG
CCGGGGACGGGCGGTGAGCGAGTTCTCCGACTCTGACAGCACGGTGCCTG
GCAGCATCGACCTCGTTCAGGTCTTCTCCTCTGCCCGCACAACGGCATCT
TCCCAGCTCGGCGCGACGGACCGAGGCAGCGGCGGCAAGAGCAGCGGCGG
CAAGAGCAGCGGCGGCAAAAGTGGCGGCGGCGGTGGCAAGAGTGGCGGCT
TCGGCGGTAAGAGCGGTGCCGATTTCAAGAGCGGCTCGCTAGGCCGGCCG
ACATCGCAGGACACCGTCTCGACCGGCTCCGCCTCGTCGCCGGGGCTCTT
TGCTTCGTCGCCTTCCGCCGCCGTGGGTGCCGTGGCTTTCGGCTGCTTCA
TCGCGCCGCCGCCGCCGCCAGCCGCCGATGCCACCGACGCCGACGATGGC
AGCTCTTGCAGCGGCGGCGACCGCAGCTTTGCCAGCGGCGGCGACCGCAG
CTTTGCCAGCGGCGGCGGCAACTACAGCGAGATTCTGCCCATGTGGGACG
CCCGCGAGCTTGGGCTGCCGCTGCTTCACCGGGTGCGCTGGGAGCTGGTG
ATTCTCCGCCGCCTCTGCCAGGACCGACGCGCGCAGGCGCTGGCAGCGCC
AACGCCGGTCCGGACCGGAAGCGGTCCCTCCGGCGGCACCACAGGCAAGA
AGAACCGCGCGCTGAAGGCTGGCGGCACAAACGCCGCGCCCGGAGCCGGG
CCATCCAAGGCACCAGCTGGCAAGAAACAGAGCAAGCAGCAGCAGCACCC
GCTGCAGCACAAGCTGTCGCTCCTCGCCGCCCTCTTCTCGTGCGGCTTTG
GGCCGCGGCGCCCGGCGCGCCCGACGGTGGTGCCGGCGACGCAGGAGGAC
GGTGATGAGAGGATGTCCCGGCGGTGCCGGCGGCGGTTGCTGCGGCCGCC
GCCGCCACCTTCCAAGTCGGCATCGGCATCGGCACGAGCGCTGGCGGCGC
TGGAGGCGGCAACGCTCGGGGAGGGCGTGGGCGGCGCAACGGCCCGGGCG
CTGGTGCTGGAGACGCGCCCCTTCCGCCTGGTGGTCTCCTTCCTCTGA back to top
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