mRNA_P-wetherbeei_contig5192.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5192.1.2 vs. uniprot
Match: A0A836C8F8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8F8_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.670e-74 Identity = 123/205 (60.00%), Postives = 163/205 (79.51%), Query Frame = 1
Query: 592 LIDVGSDQLDEAKLKIRSLSPYLDEAEYLIGARKFEYLEGFLGVFSELEEEFVDLIDGIFPTRTPADDSAREAMQFEAQQIFLAVDDLHQAAKYKRVRSAERAYAKLALAYSRFLSAGNLVLRYDPVTSTEKLYQNIPDEALRYDRSQKEPPKAQDEVLILKGPDKGRTGRLLGVIKSRGEGVVKVDGTVREVKLLDLQDLGKLL 1206
++ V +QL+ A KI++L+PYL+E EYLI ++ + YL+GFLGVFSE EE FVDLIDG++PT +PAD S+REAMQ+EAQ +FLA+DDL+ A++YKR ++AE+++ KLALAY RFL AG LV YDP+TSTE Y +IPD AL YD ++ PP+ +D +LILKGPDKGRTGRL+GVIKSR E +V++D +EVKLL L D+ K L
Sbjct: 1 MVPVRDNQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVYDTTK--PPELKDNILILKGPDKGRTGRLIGVIKSRQEAIVRMDHN-KEVKLLSLGDIAKQL 202
BLAST of mRNA_P-wetherbeei_contig5192.1.2 vs. uniprot
Match: A0A6H5KTH9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTH9_9PHAE) HSP 1 Score: 238 bits (607), Expect = 3.440e-70 Identity = 119/209 (56.94%), Postives = 164/209 (78.47%), Query Frame = 1
Query: 592 LIDVGSDQLDEAKLKIRSLSPYLDEAEYLIGARKFEYLEGFLGVFSELEEEFVDLIDGIFPTRTPADDSAREAMQFEAQQIFLAVDDLHQAAKYKRVRSAERAYAKLALAYSRFLSAGNLVLRYDPVTSTEKLYQNIPDEALRYDRSQKEPPKAQDEVLILKGPDKGRTGRLLGVIKSRGEGVVKVDGTV-REVKLLDLQDLGKLLPDD 1215
L+ V +D+L ++ I+ L+PYLDE EYLI +R ++YL+GFLGVF+ EE+FV LIDG++PT P D S+R++MQ EAQ +FLAVDDL+QA+ K+V+ +E+AY KLAL+Y RFL AGN+V YDPV++TEK + +IPDE LRY+R K P +D VLILKGPDKGRT ++GVIKSR + VV++DGT+ RE+++L+L D+ + LPDD
Sbjct: 168 LVPVSNDKLAKSVETIQGLAPYLDEVEYLITSRSWDYLKGFLGVFATCEEDFVALIDGMYPTDKPVDVSSRDSMQLEAQNVFLAVDDLYQASMAKKVKGSEKAYVKLALSYDRFLKAGNIVPAYDPVSNTEKFFTDIPDEMLRYERDSKVPLTVRDAVLILKGPDKGRTAIVVGVIKSRNQAVVRMDGTLTREMRILELSDIARQLPDD 376
BLAST of mRNA_P-wetherbeei_contig5192.1.2 vs. uniprot
Match: A0A7S2RHK3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHK3_9STRA) HSP 1 Score: 162 bits (411), Expect = 1.600e-41 Identity = 89/203 (43.84%), Postives = 138/203 (67.98%), Query Frame = 1
Query: 628 KLKIRSLSPYLDEAEYLIGARKFEYLEGFLGVFSELEEEFVDLIDGIFPTRTPADDSAREAMQFEAQQIFLAVDDLHQAAKYKRVRSAERAYAKLALAYSRFLSAGNLVLRYDPVTSTEKLYQNIPDEALRYDRSQKEPPKAQDEVLILKGPDKGRTGRLLGVIKSRGEGVVKVDGTVR--------EVKLLDLQDLGKLLPD 1212
K +I+ L YL+E E I ARK++ L ++GVF + E F ++ID + ++ AD A+ AM++EA+Q+FL +D + +A +++ +R AE++Y +LA+AY RFL A +L YD T T KLY++IP++ L YDR +PP+ QD+VLI+ GPDKGRTG+L+GV + +GVV+V+ R EVK++DLQ++ K +PD
Sbjct: 167 KERIKVLYAYLEEMERDIFARKWDTLSSYIGVFEKQELAFENIIDSLRTSQAAADRDAKRAMEYEARQMFLTLDAMAEATRFRDIRQAEKSYVQLAIAYDRFLKAADLYDVYDD-TDTSKLYESIPEDLLVYDRE--DPPRVQDDVLIIAGPDKGRTGKLIGVSDASSKGVVRVEYRKRTASKDASFEVKVVDLQNVAKTIPD 366
BLAST of mRNA_P-wetherbeei_contig5192.1.2 vs. uniprot
Match: A0A7S2UZ25_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ25_9STRA) HSP 1 Score: 157 bits (398), Expect = 8.400e-40 Identity = 101/229 (44.10%), Postives = 148/229 (64.63%), Query Frame = 1
Query: 559 LPFVGNKKDLD---LIDVGSDQLDEAKLKIRSLSPYLDEAEYLIGARKFEYLEGFLGVFSELEEEFVDLIDGIFPTRTPADDSAREAMQFEAQQIFLAVDDLHQAAKYKRVRSAERAYAKLALAYSRFLSAGNLVLRYDPV---TSTEKLYQNIPDEALRYDRSQK---------EPPKAQDEVLILKGPDKGRTGRLLGVIKSRGEGVVKVDGTVREVKLLDLQDLGK 1200
LPF K+++D + VG L EAK+KI++L PY+DE E I ++ + GFLGVFSE E++FV+LIDG+FP+ +P D +RE+MQ+EAQ++FLA+D+L +AAK K+VR + AY+KLA +Y RFL A LV + D TST N+ D + + +K E P+ +DEVL++ GPDKGR G+L+ I+ G+ VVK+D T +EV + L+ + K
Sbjct: 162 LPF---KQEVDAGKVTGVGKSDLAEAKIKIQALQPYVDEVENYIYEERWPLMGGFLGVFSEQEDQFVNLIDGLFPSNSPLDTISRESMQYEAQRMFLALDELREAAKLKQVRISRDAYSKLAKSYFRFLEAAALVPKVDLAQLATST-----NLNDSEMEMEAEEKYEERKQSTLERPEPRDEVLLVSGPDKGRLGKLVA-IEINGKAVVKLDIT-KEVIEVPLESVVK 380
BLAST of mRNA_P-wetherbeei_contig5192.1.2 vs. uniprot
Match: A0A7R9U506_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U506_9STRA) HSP 1 Score: 140 bits (353), Expect = 9.490e-34 Identity = 77/171 (45.03%), Postives = 110/171 (64.33%), Query Frame = 1
Query: 607 SDQLDEAKLKIRSLSPYLDEAEYLIGARKFEYLEGFLGVFSELEEEFVDLIDGIFPTRTPADDSAREAMQFEAQQIFLAVDDLHQAAKYKRVRSAERAYAKLALAYSRFLSAGNLVLRYDPVTSTEKLYQNIPDEALRYDRSQKEPPKAQDEVLILKGPDKGRTGRLLGVI 1119
+ ++ A+ KI +L PY+DE E I +E L FL VFS+ E+ FV IDG+ T +A EAM+ EA+Q+FLA+D++ +AA ++ ++ Y KLALAY R+L A + + YD + STEK + NIPDE L +D +K P+ QD V+ ++GPDKGRTG LLG I
Sbjct: 111 ASEIATARRKIAALKPYMDEIERYIFTNDYEPLRAFLNVFSQQEDSFVKTIDGVASRGTADAIAAAEAMEHEAKQLFLALDEIRKAATLEKPSGLKKGYIKLALAYDRYLKASDNLPGYDKIVSTEKYFANIPDEWLVFDTEKK--PEPQDPVIFIEGPDKGRTGVLLGYI 279
BLAST of mRNA_P-wetherbeei_contig5192.1.2 vs. uniprot
Match: A0A6U4CV34_9STRA (Hypothetical protein n=10 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CV34_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.070e-29 Identity = 86/194 (44.33%), Postives = 116/194 (59.79%), Query Frame = 1
Query: 559 LPF--VGNKKDLDLIDVGSDQLDEAKLKIRSLSPYLDEAEYLIGARKFEYLEGFLGVFSELEEEFVDLIDGI-FPTRTPADDSAREAMQFEAQQIFLAVDDLHQAAKYKRVRSAERAYAKLALAYSRFLSAG-NLVLRYDPVTSTEKLYQNIPDEALRYDRSQKEPPKAQDEVLILKGPDKGRTGRLLGVIKSR 1128
LPF V N+K + ++ +A+ KI +L PYLDE + I + L FL VFS EE F+ I+ + +R PA EAM+ EA++IFLA+DD+ +AA ++ + ++ Y KLALAY R+L A NL L YD V STEK + ++PDE L YD P + D VL + GPDKGRTG LLG KSR
Sbjct: 98 LPFSDVENRKPTAASAQWNSEVRKAREKIAALKPYLDEIQRYIYTEDYAPLRAFLNVFSAQEEAFLTTIESVGSASRGPAASVTAEAMEHEAKEIFLALDDIRKAATLQKPVALKKGYIKLALAYDRYLKASDNLPLGYDNVVSTEKFFADVPDEWLVYDTETL--PVSLDPVLFIAGPDKGRTGILLGY-KSR 288
BLAST of mRNA_P-wetherbeei_contig5192.1.2 vs. uniprot
Match: A0A7S3Y3I2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3I2_HETAK) HSP 1 Score: 121 bits (304), Expect = 2.490e-27 Identity = 78/217 (35.94%), Postives = 123/217 (56.68%), Query Frame = 1
Query: 634 KIRSLSPYLDEAEYLIGARKFEYLEGFLGVFSELEEEFVDLIDGIFPTRTPADDSAREAMQFEAQQIFLAVDDLHQAAKYKRVRSAERAYAKLALAYSRFLSAGNLVLRYDPVTSTEKLYQNIPDEALRYDRSQKEPPKAQDEVLILKGPDKGRTGRLLGV---IKSRGE----GVVKVDGTV------REVKLLDLQDLGKLLPDDK*RRCGSVIK 1245
++R ++ LDE + I +E++ + F F D F AD +R A+++E ++F AV+ L +AA+ K R A+ A+A++++AY R+L AG L YDPVTSTEK + ++PD ALR+ +PPK +D VL+ GPDKG+TG L+G+ + S+GE G+VK+D T+ RE+K++ + K L + R IK
Sbjct: 90 RLRRIARTLDELQRDIFNEDWEFVATYPATFRAFVPVFTRYTDARFEGEGEADRQSRVALRYEVGRLFGAVERLKRAAEKKDPREAQAAFAQISVAYDRYLKAGYLYDAYDPVTSTEKFFADVPDSALRFAPPAADPPKIKDLVLLTAGPDKGKTGTLIGLEETLGSKGEKKKSGIVKLDNTIGRVSKIREIKVVPYAIVAKRLDTEGERDAVFSIK 306
BLAST of mRNA_P-wetherbeei_contig5192.1.2 vs. uniprot
Match: A0A0G4GSY0_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GSY0_VITBC) HSP 1 Score: 120 bits (302), Expect = 1.000e-26 Identity = 70/197 (35.53%), Postives = 116/197 (58.88%), Query Frame = 1
Query: 634 KIRSLSPYLDEAEYLIGARKFEYLEGFLGVFSELEEEFVDLIDGIFPTRTPADDSAREAMQFEAQQIFLAVDDLHQAAKYKRVRSAERAYAKLALAYSRFLSAGNLVLRYDPVTSTEKLYQNIPDEALRYDRSQKEPPKAQDEVLILKGPDKGRTGRLLGV-----IKSRGEGVVKVD---GTVREVKLLDLQDLGK 1200
+IR ++ LDE + I ++ L + F D FP + P D++ R A+++E ++F +V+ L +A K VR E A+A +++++ R+L AG+L YDP+ STEK ++ + D L Y ++PPK +D+VL+L+GPDKG+TG LLGV K + +GVVK+D G++RE+K++ + K
Sbjct: 111 RIRQIATVLDELQADIYDEDWDILASYPQQLRAYVPIFTKYTDSAFPGKDPVDENTRFALRYEVGRLFGSVERLKRAVDKKDVRETEEAFAAMSVSFDRYLKAGDLYEVYDPIISTEKFFEGVEDSQLVYVPPLRDPPKIRDQVLLLRGPDKGKTGILLGVEGDEVAKVKRKGVVKLDTKVGSIRELKVVPYAFIAK 307
BLAST of mRNA_P-wetherbeei_contig5192.1.2 vs. uniprot
Match: A0A7S3Y3T3_HETAK (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3T3_HETAK) HSP 1 Score: 121 bits (304), Expect = 1.490e-25 Identity = 78/217 (35.94%), Postives = 123/217 (56.68%), Query Frame = 1
Query: 634 KIRSLSPYLDEAEYLIGARKFEYLEGFLGVFSELEEEFVDLIDGIFPTRTPADDSAREAMQFEAQQIFLAVDDLHQAAKYKRVRSAERAYAKLALAYSRFLSAGNLVLRYDPVTSTEKLYQNIPDEALRYDRSQKEPPKAQDEVLILKGPDKGRTGRLLGV---IKSRGE----GVVKVDGTV------REVKLLDLQDLGKLLPDDK*RRCGSVIK 1245
++R ++ LDE + I +E++ + F F D F AD +R A+++E ++F AV+ L +AA+ K R A+ A+A++++AY R+L AG L YDPVTSTEK + ++PD ALR+ +PPK +D VL+ GPDKG+TG L+G+ + S+GE G+VK+D T+ RE+K++ + K L + R IK
Sbjct: 599 RLRRIARTLDELQRDIFNEDWEFVATYPATFRAFVPVFTRYTDARFEGEGEADRQSRVALRYEVGRLFGAVERLKRAAEKKDPREAQAAFAQISVAYDRYLKAGYLYDAYDPVTSTEKFFADVPDSALRFAPPAADPPKIKDLVLLTAGPDKGKTGTLIGLEETLGSKGEKKKSGIVKLDNTIGRVSKIREIKVVPYAIVAKRLDTEGERDAVFSIK 815
BLAST of mRNA_P-wetherbeei_contig5192.1.2 vs. uniprot
Match: D7FKJ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKJ3_ECTSI) HSP 1 Score: 117 bits (293), Expect = 1.750e-25 Identity = 69/196 (35.20%), Postives = 115/196 (58.67%), Query Frame = 1
Query: 634 KIRSLSPYLDEAEYLIGARKFEYLEGFLGVFSELEEEFVDLIDGIFPTRTPADDSAREAMQFEAQQIFLAVDDLHQAAKYKRVRSAERAYAKLALAYSRFLSAGNLVLRYDPVTSTEKLYQNIPDEALRYDRSQKEPPKAQDEVLILKGPDKGRTGRLLGV---IKSRGEGVVKVDGT----VREVKLLDLQDLGK 1200
K+R + LDE + I ++ + + F L F D FPT P D ++R A+++E + + AV+ L +AA+ + R A+ A+A +++AY R+L AGNL YD VTSTE Y ++ + +L+Y K+PPK +D VL++ GPDKG+TG ++GV S + +VK++ + +RE+K++ L + K
Sbjct: 133 KLRRAAKMLDELQDDISNSDWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFYGAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEGFYADVSNSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIGVEGGSLSATKAIVKLETSSALGMREIKVVPLDYVAK 328 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5192.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5192.1.2 >prot_P-wetherbeei_contig5192.1.2 ID=prot_P-wetherbeei_contig5192.1.2|Name=mRNA_P-wetherbeei_contig5192.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp MQFEAQQIFLAVDDLHQAAKYKRVRSAERAYAKLALAYSRFLSAGNLVLRback to top mRNA from alignment at P-wetherbeei_contig5192:443..3286- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5192.1.2 ID=mRNA_P-wetherbeei_contig5192.1.2|Name=mRNA_P-wetherbeei_contig5192.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2844bp|location=Sequence derived from alignment at P-wetherbeei_contig5192:443..3286- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5192:443..3286- >mRNA_P-wetherbeei_contig5192.1.2 ID=mRNA_P-wetherbeei_contig5192.1.2|Name=mRNA_P-wetherbeei_contig5192.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig5192:443..3286- (Phaeothamnion wetherbeei SAG_119_79)back to top |