mRNA_P-wetherbeei_contig519.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig519.3.1 vs. uniprot
Match: A0A6H5JCF6_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCF6_9PHAE) HSP 1 Score: 148 bits (373), Expect = 2.680e-38 Identity = 80/192 (41.67%), Postives = 115/192 (59.90%), Query Frame = 2
Query: 311 AQCPLSVIGSARSPRCFRRP-PPVMYFNQAKAWLDNVGFDQLLQETFLLHVHRRRSKPVVLLAGNCFAHGELLDLKGQISVVTLPPKRISCHQPMDQAIIATFKVPYRSLMRAQRVATLETRRELRAAAAARNVSAGMMGLA*KREPHILDTTELRVVVWAAVSEEIVARCWLKAGMLPPPLPAELAGTHGK 883
A+ +++IG A+ PRCF+ P+ YF+Q AW D+ F + E FL V R +PV+LL C +H +L+D +GQ++V+T PP + HQPMDQ +IA KV YR + + +T+ LRA A AR + AG MGLA +PH+ D E WA+V+ + +ARC++KA LP + AEL HGK
Sbjct: 82 AKVDMAIIGRAKEPRCFKNGGSPLKYFSQTNAWSDSATFLKWWLEVFLPFVRRFTHEPVLLLMDGCSSHSDLVDDRGQVTVMTYPPLCTAVHQPMDQGVIAKTKVNYRKELLDVKTSTMLVADTLRAQAKARKMKAGTMGLAQGHQPHVRDAAERLQKAWASVTAQDIARCFVKAETLPEEMAAELTKQHGK 273
BLAST of mRNA_P-wetherbeei_contig519.3.1 vs. uniprot
Match: A0A6H5JB59_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB59_9PHAE) HSP 1 Score: 117 bits (294), Expect = 7.400e-27 Identity = 70/167 (41.92%), Postives = 93/167 (55.69%), Query Frame = 2
Query: 320 PLSVIGSARSPRCFR-RPPPVMYFNQAKAWLDNVGFDQLLQETFLLHVHRRRSKPVVLLAGNCFAHGELLDLKGQISVVTLPPKRISCHQPMDQAIIATFKVPYRSLMRAQRVATLETRRELRAAAAARNVSAGMMGLA*KREPHILDTTELRVVVWAAVSEEIVAR 817
PLS IG+A+ PRCF+ R + YF+Q A D F + FL HV S+ V L+ N +H +L+D K Q+ ++ LPP S HQPMD IIA +KV YR+ + RV T+ + +LR A R V G MGLA +PHILD EL + W V E + R
Sbjct: 42 PLSFIGTAKEPRCFKIRGSTIKYFSQKNACSDARVFKLWWSQVFLPHVRSVTSEKVFLIMDNHSSHADLVDPKEQVKILDLPPNCTSKHQPMDAGIIAAWKVRYRTKLLGIRVDTMTSAAQLREQAKERRVIRGCMGLAEGAQPHILDAAELGLEAWKEVLPETIKR 208
BLAST of mRNA_P-wetherbeei_contig519.3.1 vs. uniprot
Match: A0A6H5K258_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K258_9PHAE) HSP 1 Score: 114 bits (285), Expect = 5.570e-26 Identity = 71/180 (39.44%), Postives = 95/180 (52.78%), Query Frame = 2
Query: 320 PLSVIGSARSPRCFR-RPPPVMYFNQAKAWLDNVGFDQLLQETFLL-------------HVHRRRSKPVVLLAGNCFAHGELLDLKGQISVVTLPPKRISCHQPMDQAIIATFKVPYRSLMRAQRVATLETRRELRAAAAARNVSAGMMGLA*KREPHILDTTELRVVVWAAVSEEIVAR 817
PLS IG+A+ PRCF+ R P+ YF+Q AW D F+ + FLL HV S+ V+L+ N +H +L+D K Q+ + LPP S HQPMD IIA +KV YR+ + RV T+ + +LR A R V G M LA +PHILD EL + W V + R
Sbjct: 150 PLSFIGTAKEPRCFKIRGSPIKYFSQKNAWSDARVFNLWWSQVFLLFDNWVTRIIDHLPHVRSVTSEKVLLIMDNHSSHADLVDTKEQVKIRELPPNCTSKHQPMDAGIIAAWKVRYRAKLLGIRVDTMTSTTQLREQAKERKVIRGCMRLAEGAQPHILDAAELGLEAWKEVLPGTIKR 329
BLAST of mRNA_P-wetherbeei_contig519.3.1 vs. uniprot
Match: A0A6H5JM90_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM90_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 3.250e-19 Identity = 52/123 (42.28%), Postives = 74/123 (60.16%), Query Frame = 2
Query: 320 PLSVIGSARSPRCFR-RPPPVMYFNQAKAWLDNVGFDQLLQETFLLHVHRRRSKPVVLLAGNCFAHGELLDLKGQISVVTLPPKRISCHQPMDQAIIATFKVPYRSLMRAQRVATLETRRELR 685
PLS IG+A+ PRCF+ R P+ YF+Q AW D F + FL HV S+ V+L+ N +H +L+D K Q+ ++ LPP S HQPMD IIA +KV +R+ + RV T+ + +LR
Sbjct: 141 PLSFIGTAKEPRCFKIRGSPIEYFSQKNAWSDARVFKLWWLQVFLPHVRSVTSEKVILIMDNHGSHADLVDPKEQVKILELPPNCTSKHQPMDAGIIAAWKVRHRTKLLRIRVDTMTSAAQLR 263
BLAST of mRNA_P-wetherbeei_contig519.3.1 vs. uniprot
Match: A0A6H5JLL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL8_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 6.470e-19 Identity = 63/187 (33.69%), Postives = 90/187 (48.13%), Query Frame = 2
Query: 278 LRLHLHKCVRDAQCPLSVIGSARSPRCFR-RPPPVMYFNQAKAWLDNVGFDQLLQETFLLHVHRRRSKPVVLLAGNCFAHGELLDLKGQISVVTLPPKRISCHQPMDQAIIATFKVPYRSLMRAQRVATLETRRELRAAAAARNVSAGMMGLA*KREPHILDTTELRVVVWAAVSEEIVARCWLKAG 835
+ L++ + PLS+IG A++PRCFR R P+ YF+Q+ AW D F + +E L V +++ LPP + HQP D I+A K +R+L+ RV T++ +LRA A R V + + GLA PH+LD EL W VS E + RC LK G
Sbjct: 266 ITLYVAADASGRKLPLSIIGHAKNPRCFRLRTSPLKYFSQSNAWSDARVFGEWWKEVLLPWV----------------------------TILELPPNCTAKHQPCDAGIVAALKKIFRTLLLRIRVDTMKEAAQLRAEAKRRKVVSSLQGLAEGHVPHLLDAAELCHDAWGRVSTETIRRCVLKKG 424
BLAST of mRNA_P-wetherbeei_contig519.3.1 vs. uniprot
Match: A0A6H5JUU2_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU2_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 7.890e-18 Identity = 60/167 (35.93%), Postives = 84/167 (50.30%), Query Frame = 2
Query: 320 PLSVIGSARSPRCFR-RPPPVMYFNQAKAWLDNVGFDQLLQETFLLHVHRRRSKPVVLLAGNCFAHGELLDLKGQISVVTLPPKRISCHQPMDQAIIATFKVPYRSLMRAQRVATLETRRELRAAAAARNVSAGMMGLA*KREPHILDTTELRVVVWAAVSEEIVAR 817
PLS IG+A+ PRCF+ R P+ YF+Q AW D F + FL HV S+ V+L+ N +H +L+D K QPMD I+A ++V YR+ + RV T+ + +LR A V G MG A +PHILD EL + V + + R
Sbjct: 171 PLSFIGTAKEPRCFKIRGSPIKYFSQKNAWSDARVFKLWWSQVFLPHVRSVTSEKVLLIMDNHSSHADLVDPK---------------EQPMDAGILAAWRVRYRTKLLGIRVDTMTSAAQLREQAKEGKVIRGCMGFAEGAQPHILDAAELGLEALKEVLPDTIKR 322
BLAST of mRNA_P-wetherbeei_contig519.3.1 vs. uniprot
Match: A0A6H5JV28_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV28_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 1.620e-17 Identity = 67/189 (35.45%), Postives = 87/189 (46.03%), Query Frame = 2
Query: 320 PLSVIGSARSPRCFR-RPPPVMYFNQAKAWLDNVGFDQLLQETFLLHVHRRRSKPVVLLAGNCFAHGELLDLKGQISVVTLPPKRISCHQPMDQAIIATFKVPYRSLMRAQRVATLETRRELRAAAAARNVSAGMMGLA*KREPHILDTTELRVVVWAAVSEEIVARCWLKAGMLPPPLPAELAGTHGK 883
PLS+IG+A+ PRCF+ R + YF+Q AW D F + FL HV S V+L+ N H +L+D K Q P K C + RV T+ + +LR A R V G MGLA +PHILD EL + W E + RCW K LPP + A+L GK
Sbjct: 59 PLSLIGTAKEPRCFKIRGSTIKYFSQKNAWSDARVFKPWWSQVFLPHVRSVTSDKVLLIMYNHSCHADLVDPKEQ------PGK---CGTKLLGI----------------RVDTMTSAAQLREQAKERKVIRGCMGLAEGAQPHILDAAELGLEAWKEFLPETIKRCWRKCDTLPPAVHADLDQDVGK 222
BLAST of mRNA_P-wetherbeei_contig519.3.1 vs. uniprot
Match: A0A6H5JHY0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY0_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 1.580e-16 Identity = 64/189 (33.86%), Postives = 87/189 (46.03%), Query Frame = 2
Query: 320 PLSVIGSARSPRCFR-RPPPVMYFNQAKAWLDNVGFDQLLQETFLLHVHRRRSKPVVLLAGNCFAHGELLDLKGQISVVTLPPKRISCHQPMDQAIIATFKVPYRSLMRAQRVATLETRRELRAAAAARNVSAGMMGLA*KREPHILDTTELRVVVWAAVSEEIVARCWLKAGMLPPPLPAELAGTHGK 883
PLS IG+A+ PRCF+ R P+ YF+Q A D F + FL +V S+ V+L+ N +H +L+D P +Q A +V T+ + +LR A R V G MGLA +PHILD EL W V E + RCW K +LPP + A+L GK
Sbjct: 58 PLSCIGTAKEPRCFKIRGSPIKYFSQKNARSDARVFKLWWSQVFLPYVRSVTSEKVLLIMDNHSSHADLVD-------------------PKEQGEAAGIRVD-----------TMTSAAQLREQAKERKVIRGCMGLAEGAQPHILDAAELGFEAWKKVLPETIKRCWRKCEILPPAVHADLDQDVGK 216
BLAST of mRNA_P-wetherbeei_contig519.3.1 vs. uniprot
Match: UPI00189C0777 (tigger transposable element-derived protein 4-like n=1 Tax=Dermacentor silvarum TaxID=543639 RepID=UPI00189C0777) HSP 1 Score: 74.7 bits (182), Expect = 2.230e-11 Identity = 48/146 (32.88%), Postives = 75/146 (51.37%), Query Frame = 2
Query: 248 HEGHEGEEPSLRLHLHKCVRDAQCPLSVIGSARSPRCFR--RPPPVMYFNQAKAWLDNVGFDQLLQETFLLHVHRR---RSKPVVLLAGNCFAHGELLDLKGQISVVTLPPKRISCHQPMDQAIIATFKVPYRSLMRAQRVATLET 670
H G +E L + P+ VIG +++PRCF+ + PV+Y KAW+ F E+++ + R+ + ++L NC AHG + +LK + V LPP S QPMDQ +I T KV YRS + ++ V L++
Sbjct: 207 HGGKHSKERVTVLIGSNMSGTEKLPMLVIGKSKAPRCFKGLKSLPVLYEANKKAWVTQQIF-----ESYVRRLDRKFDLEGRKILLFVDNCAAHGHINNLKS-VRVEFLPPNTTSVLQPMDQGVIRTLKVNYRSRLLSRVVVCLDS 346
BLAST of mRNA_P-wetherbeei_contig519.3.1 vs. uniprot
Match: A0A8B6XL37_HYDVU (tigger transposable element-derived protein 4-like n=2 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B6XL37_HYDVU) HSP 1 Score: 67.0 bits (162), Expect = 5.920e-9 Identity = 43/131 (32.82%), Postives = 71/131 (54.20%), Query Frame = 2
Query: 299 CVRDAQCPLSVIGSARSPRCFRRPPPVM--YFNQAKAWLDNVGFDQLLQ-ETFLLHVHRRRSKPVVLLAGNCFAHGELLDLKGQISVVTLPPKRISCHQPMDQAIIATFKVPYRSLMRAQRVATLETRREL 682
C + P+ V+G ++SPRCF+ ++ Y NQ K+W+D+V F + ++ +TF++ NC AH + +LK I + LP S QPMDQ +I + KV YRSL + V ++ +++L
Sbjct: 225 CAAGDKIPMFVLGKSKSPRCFKGIKHLLCRYRNQNKSWMDSVLFKEWIRVDTFIID--------------NCPAHPTVDNLKS-IKPIFLPQNTTSKLQPMDQGVIRSLKVYYRSLALQRLVVEIDKKKDL 340 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig519.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig519.3.1 >prot_P-wetherbeei_contig519.3.1 ID=prot_P-wetherbeei_contig519.3.1|Name=mRNA_P-wetherbeei_contig519.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=194bp MTWSTSQTSTRLTSSTSCFCAGRTSPVDGAWHEGHEGEEPSLRLHLHKCVback to top mRNA from alignment at P-wetherbeei_contig519:6134..7258+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig519.3.1 ID=mRNA_P-wetherbeei_contig519.3.1|Name=mRNA_P-wetherbeei_contig519.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1125bp|location=Sequence derived from alignment at P-wetherbeei_contig519:6134..7258+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig519:6134..7258+ >mRNA_P-wetherbeei_contig519.3.1 ID=mRNA_P-wetherbeei_contig519.3.1|Name=mRNA_P-wetherbeei_contig519.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=582bp|location=Sequence derived from alignment at P-wetherbeei_contig519:6134..7258+ (Phaeothamnion wetherbeei SAG_119_79)back to top |