mRNA_P-wetherbeei_contig51850.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig51850.2.1 vs. uniprot
Match: A0A7C4Y7X3_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4Y7X3_9HYPH) HSP 1 Score: 106 bits (264), Expect = 4.450e-27 Identity = 46/98 (46.94%), Postives = 68/98 (69.39%), Query Frame = 1
Query: 88 GDDLRTAIAGKTVHVTTPIGTVPVSFRSDGTMSGRSSGVAAYAMAAADQGRWWVIGDRLCQQWAKWFNKATHCFSMRREGRTLYWS-GSGRSGVATIA 378
G+ LR A++GKTV++ TP+G +P+S+R +GTM GRS +A Y + +D G WW+ DRLCQ+W W +C++MRR+G ++WS GR+G A IA
Sbjct: 28 GESLRAAVSGKTVYLATPVGALPISYRPNGTMLGRSGRLAMYVGSESDYGTWWISRDRLCQRWDTWLEGKAYCYTMRRDGDVVHWSRNDGRTGTAMIA 125
BLAST of mRNA_P-wetherbeei_contig51850.2.1 vs. uniprot
Match: A0A1E2S2A1_9HYPH (Uncharacterized protein n=1 Tax=Methyloligella halotolerans TaxID=1177755 RepID=A0A1E2S2A1_9HYPH) HSP 1 Score: 82.8 bits (203), Expect = 7.900e-18 Identity = 40/105 (38.10%), Postives = 65/105 (61.90%), Query Frame = 1
Query: 76 DSVGGDDLRTAIAGKTVHVTTPIGTVPVSFRSDGTMSGRSSGVAAY---AMAAADQGRWWVIGDRLCQQWAKWFNKATHCFSMRREGRTLYW-SGSGRSGVATIA 378
+S+ GD+LR+A++GKTV++ +P+ + + G+M GR VAA + D G+WWV GD+LCQ+W W + ++C+ + + G T+ W GRSG A I+
Sbjct: 24 NSLAGDELRSAVSGKTVYLRISGFELPIQYSAGGSMRGRMGSVAASFAGGESPTDTGKWWVKGDQLCQKWNSWMDGQSYCYRLTKTGSTVSWVRNDGRSGTARIS 128
BLAST of mRNA_P-wetherbeei_contig51850.2.1 vs. uniprot
Match: UPI002011F4E3 (hypothetical protein n=3 Tax=unclassified Ciceribacter TaxID=2628820 RepID=UPI002011F4E3) HSP 1 Score: 82.0 bits (201), Expect = 1.660e-17 Identity = 42/106 (39.62%), Postives = 67/106 (63.21%), Query Frame = 1
Query: 73 ADSVGGDDLRTAIAGKTVHVTTPIGT-VPVSFRSDGTMSGRSSGVAAYAM-AAADQGRWWVIGDRLCQQWAKWFNKATHCFSMRR-EGRTLYWS-GSGRSGVATIA 378
A + G +++ IAGKTV + TP+G +P+ +R+DG ++G SG + +M A ++GRWWV G RLCQQW W+ T CF++++ +G + W G +G A I+
Sbjct: 22 ASELSGGEVKELIAGKTVRLDTPLGIKLPLRYRTDGAVAGDISGFSMASMFAPKEEGRWWVDGQRLCQQWPTWYKGRTFCFTIKKLDGNRIAWQRDDGATGTAVIS 127
BLAST of mRNA_P-wetherbeei_contig51850.2.1 vs. uniprot
Match: A0A2S5M4Q3_HYPSQ (Uncharacterized protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5M4Q3_HYPSQ) HSP 1 Score: 79.7 bits (195), Expect = 1.230e-16 Identity = 38/118 (32.20%), Postives = 65/118 (55.08%), Query Frame = 1
Query: 31 MLATGAASCHAAFAADSVGGDDLRTAIAGKTVHVTTPIGTVPVSFRSDGTMSGRSSGVAAYAMAAADQGRWWVIGDRLCQQWAKWFNKATHCFSMRREGRTLYW-SGSGRSGVATIAN 381
+ A G A+ + +A +G +L+ +AGKT+ ++ P G++P+ + GTM +S + +A + D+G W + G+R CQ+W W CF++ R G T+ W S G +G A N
Sbjct: 11 LAAAGIAAASGSASAGQLGAAELKVLLAGKTISLSAPFGSLPIRYSPGGTMVAKSKAMGLFAGVSEDRGTWRIAGNRFCQRWTVWNGGKEQCFTVTRTGTTVRWVSNDGMTGTAYAMN 128
BLAST of mRNA_P-wetherbeei_contig51850.2.1 vs. uniprot
Match: J2VKA1_9HYPH (Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 TaxID=1144343 RepID=J2VKA1_9HYPH) HSP 1 Score: 79.3 bits (194), Expect = 1.780e-16 Identity = 42/107 (39.25%), Postives = 68/107 (63.55%), Query Frame = 1
Query: 73 ADSVGGDDLRTAIAGKTVHVTTPIG-TVPVSFRSDGTMSGRSSGVAAYAMAAADQ-GRWWVIGDRLCQQWAKWFNKATHCFSMRREG-RTLYW-SGSGRSGVATIAN 381
AD + G +++ I+G+ V ++TP G +P+S+R++G +SG SG++A +M A + G+WW+ G+RLCQQW W+ CF++ + G T+ W G SG A I N
Sbjct: 23 ADDLSGAEIKKLISGEKVFLSTPFGGELPLSYRTNGQVSGDVSGISAASMFAPKEIGKWWIEGNRLCQQWPTWYKGRQFCFTIVKTGDSTITWLRDDGTSGTARIGN 129
BLAST of mRNA_P-wetherbeei_contig51850.2.1 vs. uniprot
Match: A0A1I7N3P9_9HYPH (Uncharacterized protein n=3 Tax=Hyphomicrobium TaxID=81 RepID=A0A1I7N3P9_9HYPH) HSP 1 Score: 78.6 bits (192), Expect = 3.140e-16 Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = 1
Query: 70 AADSVGGDDLRTAIAGKTVHVTTPIGTVPVSFRSDGTMSGRSSGVAAYAMAAA-DQGRWWVIGDRLCQQWAKWFNKATHCFSMRREGRTLYW-SGSGRSGVA 369
AAD++ G +LR +AG+T++++ P G+VP+ + GTMS +S +A ++ + D+G W + G++ CQ+W W CFS+ R G TL W S G +G A
Sbjct: 22 AADNLTGIELRGLLAGRTIYISAPFGSVPIRYNPGGTMSAKSKAMAVFSGGISEDRGTWRISGNQFCQRWNLWQAGREQCFSVTRTGSTLRWASNDGMTGTA 123
BLAST of mRNA_P-wetherbeei_contig51850.2.1 vs. uniprot
Match: E3I607_RHOVT (Uncharacterized protein n=4 Tax=Rhodomicrobium TaxID=1068 RepID=E3I607_RHOVT) HSP 1 Score: 78.2 bits (191), Expect = 4.670e-16 Identity = 38/99 (38.38%), Postives = 62/99 (62.63%), Query Frame = 1
Query: 88 GDDLRTAIAGKTVHVTTPIGTVPVSFRSDGTMSGRSS-GVAAYAMAAADQGRWWVIGDRLCQQWAKWFNKATHCFSMRREGRT-LYWS-GSGRSGVATI 375
G L +A++GKTV+++TP+G VP+ + ++G +SGR+ + D GRWWV +LC +W +W + THCF+M+R T ++W G+SG A +
Sbjct: 27 GPALHSAVSGKTVYISTPMGEVPIRYAANGQVSGRTELALLDGETTTKDSGRWWVADSKLCIRWNRWMSGETHCFTMKRVSPTEVHWRRDDGKSGRARL 125
BLAST of mRNA_P-wetherbeei_contig51850.2.1 vs. uniprot
Match: A0A7X3LXJ8_9HYPH (Uncharacterized protein n=2 Tax=Stappia sp. GBMRC 2046 TaxID=2692190 RepID=A0A7X3LXJ8_9HYPH) HSP 1 Score: 77.4 bits (189), Expect = 8.010e-16 Identity = 46/120 (38.33%), Postives = 72/120 (60.00%), Query Frame = 1
Query: 31 MLATGAASCHAAFAADSVGGDDLRTAIAGKTVHVTTPIG-TVPVSFRSDGTM--SGRSSGVAAYAMAAADQGRWWVIGDRLCQQWAKWFNKATHCFSMRREG-RTLYWS-GSGRSGVATI 375
M+A G+ + AA A + G +++ A++GK + + TP G P+ +R +G + SG++ G+ + M +D GRWWV GDRLCQQW W++ CF++ +G TL W+ G SG A I
Sbjct: 1 MIAIGSLA-QAAIANSEMTGSEIKAAVSGKRIFLKTPFGGEFPLYYRENGKVDGSGKAIGLGRF-MKPSDSGRWWVQGDRLCQQWRSWYDGKRFCFTLAEQGGNTLLWTRDDGLSGRARI 118
BLAST of mRNA_P-wetherbeei_contig51850.2.1 vs. uniprot
Match: UPI001FE66406 (hypothetical protein n=1 Tax=Peteryoungia desertarenae TaxID=1813451 RepID=UPI001FE66406) HSP 1 Score: 77.0 bits (188), Expect = 1.080e-15 Identity = 45/115 (39.13%), Postives = 69/115 (60.00%), Query Frame = 1
Query: 52 SCHAAFAADSVGGDDLRTAIAGKTVHVTTPIG-TVPVSFRSDGTM--SGRSSGVAAYAMAAADQGRWWVIGDRLCQQWAKWFNKATHCFSMRREGRT-LYWS-GSGRSGVATIAN 381
S AA A + DD+++ I GK +++ TP G P+++R DG + SG + G+ +A D GRWW+ GDRLCQQ+ W+ A CF ++R +T L W+ +G++G A I N
Sbjct: 3 SVPAALATERFTADDIKSDIIGKRIYLATPFGGEFPLNYRRDGKVDGSGEALGLGRFAKPN-DTGRWWINGDRLCQQFTSWYRGAAMCFELQRIDQTRLKWTRDNGQTGTARIGN 116
BLAST of mRNA_P-wetherbeei_contig51850.2.1 vs. uniprot
Match: A0A4S8NU73_9HYPH (Uncharacterized protein n=1 Tax=Rhizobium ipomoeae TaxID=1210932 RepID=A0A4S8NU73_9HYPH) HSP 1 Score: 75.5 bits (184), Expect = 6.240e-15 Identity = 48/123 (39.02%), Postives = 71/123 (57.72%), Query Frame = 1
Query: 28 LMLATGAASCHAAFAADSVGGDDLRTAIAGKTVHVTTPIG-TVPVSFRSDGTM--SGRSSGVAAYAMAAADQGRWWVIGDRLCQQWAKWFNKATHCFSMRREG-RTLYW-SGSGRSGVATIAN 381
L+ AT A S A A + D+R I GK +++ TP G P+++R +G + SG + G+ +A D+GRWW+ G+RLCQQ+ W+ A CF + R G RTL W +G++G A I N
Sbjct: 10 LVAATLALSVAGASANERYSATDIREDIIGKRIYLATPFGGEFPLNYRPNGVVDGSGEALGLGRFAKPD-DKGRWWIRGNRLCQQFTSWYKGAPMCFELIRTGERTLKWIRDNGQTGTARIGN 131 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51850.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig51850.2.1 >prot_P-wetherbeei_contig51850.2.1 ID=prot_P-wetherbeei_contig51850.2.1|Name=mRNA_P-wetherbeei_contig51850.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=128bp MIRLFTVVCLMLATGAASCHAAFAADSVGGDDLRTAIAGKTVHVTTPIGTback to top mRNA from alignment at P-wetherbeei_contig51850:107..490- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig51850.2.1 ID=mRNA_P-wetherbeei_contig51850.2.1|Name=mRNA_P-wetherbeei_contig51850.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=384bp|location=Sequence derived from alignment at P-wetherbeei_contig51850:107..490- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig51850:107..490- >mRNA_P-wetherbeei_contig51850.2.1 ID=mRNA_P-wetherbeei_contig51850.2.1|Name=mRNA_P-wetherbeei_contig51850.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=384bp|location=Sequence derived from alignment at P-wetherbeei_contig51850:107..490- (Phaeothamnion wetherbeei SAG_119_79)back to top |