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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Seed ortholog | 44056.XP_009039937.1 |
| PFAMs | JAB,Myb_DNA-bind_6,Myb_DNA-binding,PWWP |
| Model size | 3130 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K11865,ko:K15225 |
| KEGG Pathway | ko04918,map04918 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Evalue | 0.000476 |
| EggNOG OGs | COG1310@1|root,COG5147@1|root,KOG0051@2759|Eukaryota,KOG1555@2759|Eukaryota |
| Description | metallopeptidase activity |
| Cds size | 3120 |
| COG category | ADK |
| BRITE | ko00000,ko00001,ko01002,ko03021,ko04121 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186776.9996686-UTR-P-wetherbeei_contig5178:741..750 | 1683186776.9996686-UTR-P-wetherbeei_contig5178:741..750 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig5178 742..750 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186777.0104315-CDS-P-wetherbeei_contig5178:750..3870 | 1683186777.0104315-CDS-P-wetherbeei_contig5178:750..3870 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig5178 751..3870 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5178.2.1 >prot_P-wetherbeei_contig5178.2.1 ID=prot_P-wetherbeei_contig5178.2.1|Name=mRNA_P-wetherbeei_contig5178.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1040bp
MPWRVKVRKDGKQRAASISGGGGGGGDGDSGSGSGGGEASGGATQGATAF
CGHTRQCSVCKQKRHGSRVCRVDRGHTAPDWDSPLAATAAAAAAAPVTAS
LAAPAASPSPAPAANAPATASEVAAASAASAKTAGVQKARAKVVRPTRQP
KLLGAAVPQEKAAAKAALIAAEVTAGVELDAGDDGAGDASELEELPPSSM
DVDGRQAEDNDGASAAASRSADGGGGDREGVRGCANCRAKEGYIAVPPAA
AAAAATAGVPAVAAVAVAAAAASANAAPTNAGTAMSDSVEDCEIRSIELR
LAADGSDATAAAGAETRPEAEGGGIVAEIFGGCGDNGIGDEGSSAGDGGI
NGIGNGGDDGWIAGRTTGTWAIFVRADGIDGANSSGIKPSGHSIVESAAA
AAAPQPAAAPQPTAAPGSAARAGDDETLENAAAAGKESSGDEWSGPPDRN
WTPMVRLGADPLKAQKLRLPTSDRSLASCAKGARAAAVAATAAAEEEQED
NDGSAAAAPPMLPYSDEDIDDPVRCLMRAPAAMAAAAAEEEGGDGDGADL
DGDGDDADDAALGEAAAGFATLGGAAAGCATLGGGAAAGFEGQSPGTRVG
NTSSATVSLYDDEDGGDGFGGGAGNGYSGFHDGFGVTAAPHGHHHHDVNA
GNQLITYDVDAEIDNRYTAGGRGGDVDGGDSGSSRGMRHFFHGLTAMGKD
GQGEAMVLARAATAAAEAVAAAAAVAARTAVPALLPSMGEVVAPAANASF
LDGGSPAVNGCVEGAGGAGHHRGQNGSGFGRNTSAGSAGNECTPAATSAD
GALAKGEPMEVDVSPPAPALFAAGSSSAAAAAAPVPTRAPMSVDGFGAAA
LTSGGLNTACLNGATDTPAMLPPAATNSNGRQVTTESPEASEPAAAPTVA
EAAAAAAPDTAVAVLWAEGKEPLRPWRLVLRAAPASSEELHAALAPLVYN
PPLALDPELAPVLLEGYPPTALAVVAATRRLAAYYSRYGRRVDLSADWKG
GLTKGEKLARALEVWLPRLELAPEDRLCFLRDVFQLLLSW back to topmRNA from alignment at P-wetherbeei_contig5178:742..3870+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig5178.2.1 ID=mRNA_P-wetherbeei_contig5178.2.1|Name=mRNA_P-wetherbeei_contig5178.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3129bp|location=Sequence derived from alignment at P-wetherbeei_contig5178:742..3870+ (Phaeothamnion wetherbeei SAG_119_79)
CTGCCGCGGATGCCGTGGCGCGTCAAAGTACGCAAGGACGGGAAGCAGCG
CGCCGCCTCCATATCCGGCGGCGGCGGCGGCGGCGGCGATGGTGACAGCG
GCAGTGGGAGCGGCGGCGGCGAAGCGTCTGGCGGGGCCACGCAGGGGGCG
ACTGCGTTCTGCGGTCACACGCGCCAGTGCAGCGTCTGCAAGCAGAAGAG
GCACGGTTCGAGGGTATGCCGGGTGGATCGGGGGCACACCGCCCCGGACT
GGGACTCACCGCTGGCGGCCACGGCAGCAGCGGCAGCGGCAGCACCAGTC
ACGGCATCATTGGCGGCACCAGCTGCGTCACCATCGCCGGCGCCAGCGGC
GAACGCGCCAGCGACGGCATCGGAAGTGGCGGCGGCGTCGGCGGCCTCGG
CGAAGACTGCGGGCGTGCAGAAGGCACGGGCGAAGGTGGTACGCCCGACG
CGCCAGCCAAAGCTCCTCGGCGCCGCAGTGCCGCAGGAGAAGGCGGCGGC
AAAGGCGGCACTAATAGCGGCGGAGGTGACGGCGGGAGTGGAGCTCGACG
CGGGCGACGACGGGGCCGGCGACGCGTCGGAGTTGGAGGAGCTGCCGCCA
TCCTCAATGGACGTGGATGGGCGGCAAGCGGAAGATAACGACGGCGCCAG
CGCTGCTGCTAGCAGGAGCGCTGACGGCGGCGGTGGCGACAGAGAAGGTG
TTCGCGGCTGCGCCAATTGCAGGGCAAAGGAAGGCTACATTGCTGTTCCC
CCTGCCGCTGCCGCTGCCGCCGCCACTGCCGGCGTTCCGGCTGTCGCCGC
CGTTGCTGTTGCCGCCGCCGCCGCCTCTGCCAACGCCGCTCCGACCAATG
CCGGTACTGCCATGTCGGACTCGGTGGAGGACTGCGAGATACGATCCATC
GAATTGCGGCTCGCAGCGGACGGATCTGATGCCACCGCTGCGGCTGGTGC
CGAGACCCGCCCTGAAGCCGAAGGTGGTGGCATCGTCGCTGAGATATTCG
GCGGCTGCGGCGACAACGGCATCGGCGACGAGGGCTCTTCTGCTGGCGAC
GGCGGAATCAATGGCATCGGCAATGGTGGCGACGATGGCTGGATTGCAGG
GCGCACCACGGGAACCTGGGCCATATTTGTGCGCGCCGACGGCATAGACG
GCGCGAACAGCTCTGGGATCAAGCCTTCTGGACACAGCATTGTGGAGTCT
GCTGCTGCAGCGGCAGCGCCGCAGCCAGCCGCCGCGCCGCAGCCCACCGC
CGCGCCGGGTTCCGCCGCGCGCGCCGGAGACGACGAAACGCTGGAGAATG
CCGCTGCGGCAGGCAAGGAGTCGTCGGGGGACGAATGGTCTGGGCCACCG
GACAGGAACTGGACTCCGATGGTCCGCCTCGGCGCCGACCCGCTCAAGGC
GCAGAAGTTGCGGTTGCCCACGAGCGACAGGTCGCTGGCTTCGTGCGCAA
AAGGCGCGCGCGCGGCGGCAGTGGCGGCCACCGCCGCCGCAGAGGAAGAG
CAGGAGGACAATGATGGATCGGCGGCGGCAGCGCCGCCGATGCTGCCGTA
CAGCGACGAGGACATTGACGACCCTGTTCGATGCCTCATGCGGGCGCCGG
CGGCGATGGCTGCGGCAGCTGCCGAGGAGGAGGGTGGCGACGGTGATGGC
GCGGATCTGGATGGCGACGGCGACGACGCGGACGACGCGGCGCTGGGCGA
AGCGGCGGCGGGCTTTGCGACGCTGGGCGGAGCGGCAGCGGGCTGCGCGA
CGCTGGGCGGTGGAGCGGCGGCGGGCTTTGAGGGGCAGTCACCGGGCACG
CGCGTCGGCAACACGTCGTCGGCGACTGTCAGTCTCTACGACGACGAGGA
CGGCGGCGACGGCTTCGGCGGTGGCGCCGGCAACGGTTACTCTGGCTTCC
ACGACGGCTTCGGCGTCACCGCCGCTCCTCACGGCCACCACCACCACGAC
GTCAATGCTGGCAACCAACTAATAACGTATGACGTGGACGCGGAGATCGA
CAACCGCTATACTGCCGGCGGCCGCGGCGGCGACGTCGACGGTGGCGATA
GCGGCAGCAGTCGCGGGATGCGGCATTTCTTTCACGGTCTGACGGCGATG
GGGAAGGACGGTCAGGGCGAGGCGATGGTGTTGGCGAGGGCGGCAACGGC
CGCGGCGGAGGCGGTGGCAGCGGCGGCGGCGGTGGCGGCGAGAACCGCGG
TGCCAGCTCTATTGCCGTCTATGGGAGAGGTGGTGGCGCCAGCCGCAAAT
GCAAGCTTTCTCGACGGTGGCAGCCCCGCGGTCAATGGCTGTGTCGAAGG
CGCCGGCGGTGCCGGCCACCATCGCGGACAGAACGGCAGCGGATTCGGGA
GGAACACGTCGGCCGGCTCAGCAGGGAATGAATGTACCCCGGCGGCCACC
TCGGCGGATGGGGCTCTCGCGAAAGGTGAACCCATGGAGGTGGACGTGTC
GCCGCCGGCGCCGGCTTTGTTCGCTGCGGGCTCCTCCTCCGCAGCGGCGG
CGGCCGCACCGGTGCCGACCAGGGCACCCATGTCGGTTGACGGTTTTGGT
GCCGCCGCCCTGACGAGCGGCGGTCTGAACACTGCCTGTCTCAACGGCGC
GACTGACACGCCGGCGATGCTGCCGCCGGCGGCAACAAACAGCAATGGCA
GACAGGTGACAACCGAGTCTCCCGAGGCTTCTGAGCCGGCTGCCGCTCCT
ACCGTGGCAGAAGCGGCAGCGGCGGCGGCGCCGGATACCGCTGTTGCAGT
GCTGTGGGCGGAAGGCAAGGAGCCGCTGCGGCCGTGGCGGTTGGTGCTGA
GGGCGGCGCCCGCCTCAAGCGAGGAGCTGCACGCCGCGCTGGCACCGCTC
GTCTACAACCCGCCGCTGGCCCTCGACCCCGAGCTGGCGCCGGTGCTGCT
GGAAGGCTACCCGCCGACGGCGCTGGCGGTGGTGGCGGCGACGCGGCGGC
TGGCGGCGTACTACAGCCGCTACGGGCGACGGGTGGACTTGTCGGCGGAC
TGGAAAGGGGGGCTGACCAAAGGGGAGAAGCTGGCGCGCGCGCTGGAAGT
GTGGCTGCCGCGGCTGGAGCTGGCGCCGGAAGACCGCCTCTGCTTCCTGC
GAGACGTGTTCCAGCTGCTCCTCAGCTGG back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig5178:742..3870+ >mRNA_P-wetherbeei_contig5178.2.1 ID=mRNA_P-wetherbeei_contig5178.2.1|Name=mRNA_P-wetherbeei_contig5178.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=3120bp|location=Sequence derived from alignment at P-wetherbeei_contig5178:742..3870+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGTGGCGCGTCAAAGTACGCAAGGACGGGAAGCAGCGCGCCGCCTC
CATATCCGGCGGCGGCGGCGGCGGCGGCGATGGTGACAGCGGCAGTGGGA
GCGGCGGCGGCGAAGCGTCTGGCGGGGCCACGCAGGGGGCGACTGCGTTC
TGCGGTCACACGCGCCAGTGCAGCGTCTGCAAGCAGAAGAGGCACGGTTC
GAGGGTATGCCGGGTGGATCGGGGGCACACCGCCCCGGACTGGGACTCAC
CGCTGGCGGCCACGGCAGCAGCGGCAGCGGCAGCACCAGTCACGGCATCA
TTGGCGGCACCAGCTGCGTCACCATCGCCGGCGCCAGCGGCGAACGCGCC
AGCGACGGCATCGGAAGTGGCGGCGGCGTCGGCGGCCTCGGCGAAGACTG
CGGGCGTGCAGAAGGCACGGGCGAAGGTGGTACGCCCGACGCGCCAGCCA
AAGCTCCTCGGCGCCGCAGTGCCGCAGGAGAAGGCGGCGGCAAAGGCGGC
ACTAATAGCGGCGGAGGTGACGGCGGGAGTGGAGCTCGACGCGGGCGACG
ACGGGGCCGGCGACGCGTCGGAGTTGGAGGAGCTGCCGCCATCCTCAATG
GACGTGGATGGGCGGCAAGCGGAAGATAACGACGGCGCCAGCGCTGCTGC
TAGCAGGAGCGCTGACGGCGGCGGTGGCGACAGAGAAGGTGTTCGCGGCT
GCGCCAATTGCAGGGCAAAGGAAGGCTACATTGCTGTTCCCCCTGCCGCT
GCCGCTGCCGCCGCCACTGCCGGCGTTCCGGCTGTCGCCGCCGTTGCTGT
TGCCGCCGCCGCCGCCTCTGCCAACGCCGCTCCGACCAATGCCGGTACTG
CCATGTCGGACTCGGTGGAGGACTGCGAGATACGATCCATCGAATTGCGG
CTCGCAGCGGACGGATCTGATGCCACCGCTGCGGCTGGTGCCGAGACCCG
CCCTGAAGCCGAAGGTGGTGGCATCGTCGCTGAGATATTCGGCGGCTGCG
GCGACAACGGCATCGGCGACGAGGGCTCTTCTGCTGGCGACGGCGGAATC
AATGGCATCGGCAATGGTGGCGACGATGGCTGGATTGCAGGGCGCACCAC
GGGAACCTGGGCCATATTTGTGCGCGCCGACGGCATAGACGGCGCGAACA
GCTCTGGGATCAAGCCTTCTGGACACAGCATTGTGGAGTCTGCTGCTGCA
GCGGCAGCGCCGCAGCCAGCCGCCGCGCCGCAGCCCACCGCCGCGCCGGG
TTCCGCCGCGCGCGCCGGAGACGACGAAACGCTGGAGAATGCCGCTGCGG
CAGGCAAGGAGTCGTCGGGGGACGAATGGTCTGGGCCACCGGACAGGAAC
TGGACTCCGATGGTCCGCCTCGGCGCCGACCCGCTCAAGGCGCAGAAGTT
GCGGTTGCCCACGAGCGACAGGTCGCTGGCTTCGTGCGCAAAAGGCGCGC
GCGCGGCGGCAGTGGCGGCCACCGCCGCCGCAGAGGAAGAGCAGGAGGAC
AATGATGGATCGGCGGCGGCAGCGCCGCCGATGCTGCCGTACAGCGACGA
GGACATTGACGACCCTGTTCGATGCCTCATGCGGGCGCCGGCGGCGATGG
CTGCGGCAGCTGCCGAGGAGGAGGGTGGCGACGGTGATGGCGCGGATCTG
GATGGCGACGGCGACGACGCGGACGACGCGGCGCTGGGCGAAGCGGCGGC
GGGCTTTGCGACGCTGGGCGGAGCGGCAGCGGGCTGCGCGACGCTGGGCG
GTGGAGCGGCGGCGGGCTTTGAGGGGCAGTCACCGGGCACGCGCGTCGGC
AACACGTCGTCGGCGACTGTCAGTCTCTACGACGACGAGGACGGCGGCGA
CGGCTTCGGCGGTGGCGCCGGCAACGGTTACTCTGGCTTCCACGACGGCT
TCGGCGTCACCGCCGCTCCTCACGGCCACCACCACCACGACGTCAATGCT
GGCAACCAACTAATAACGTATGACGTGGACGCGGAGATCGACAACCGCTA
TACTGCCGGCGGCCGCGGCGGCGACGTCGACGGTGGCGATAGCGGCAGCA
GTCGCGGGATGCGGCATTTCTTTCACGGTCTGACGGCGATGGGGAAGGAC
GGTCAGGGCGAGGCGATGGTGTTGGCGAGGGCGGCAACGGCCGCGGCGGA
GGCGGTGGCAGCGGCGGCGGCGGTGGCGGCGAGAACCGCGGTGCCAGCTC
TATTGCCGTCTATGGGAGAGGTGGTGGCGCCAGCCGCAAATGCAAGCTTT
CTCGACGGTGGCAGCCCCGCGGTCAATGGCTGTGTCGAAGGCGCCGGCGG
TGCCGGCCACCATCGCGGACAGAACGGCAGCGGATTCGGGAGGAACACGT
CGGCCGGCTCAGCAGGGAATGAATGTACCCCGGCGGCCACCTCGGCGGAT
GGGGCTCTCGCGAAAGGTGAACCCATGGAGGTGGACGTGTCGCCGCCGGC
GCCGGCTTTGTTCGCTGCGGGCTCCTCCTCCGCAGCGGCGGCGGCCGCAC
CGGTGCCGACCAGGGCACCCATGTCGGTTGACGGTTTTGGTGCCGCCGCC
CTGACGAGCGGCGGTCTGAACACTGCCTGTCTCAACGGCGCGACTGACAC
GCCGGCGATGCTGCCGCCGGCGGCAACAAACAGCAATGGCAGACAGGTGA
CAACCGAGTCTCCCGAGGCTTCTGAGCCGGCTGCCGCTCCTACCGTGGCA
GAAGCGGCAGCGGCGGCGGCGCCGGATACCGCTGTTGCAGTGCTGTGGGC
GGAAGGCAAGGAGCCGCTGCGGCCGTGGCGGTTGGTGCTGAGGGCGGCGC
CCGCCTCAAGCGAGGAGCTGCACGCCGCGCTGGCACCGCTCGTCTACAAC
CCGCCGCTGGCCCTCGACCCCGAGCTGGCGCCGGTGCTGCTGGAAGGCTA
CCCGCCGACGGCGCTGGCGGTGGTGGCGGCGACGCGGCGGCTGGCGGCGT
ACTACAGCCGCTACGGGCGACGGGTGGACTTGTCGGCGGACTGGAAAGGG
GGGCTGACCAAAGGGGAGAAGCTGGCGCGCGCGCTGGAAGTGTGGCTGCC
GCGGCTGGAGCTGGCGCCGGAAGACCGCCTCTGCTTCCTGCGAGACGTGT
TCCAGCTGCTCCTCAGCTGG back to top
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