mRNA_P-wetherbeei_contig5171.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5171.1.1
Unique NamemRNA_P-wetherbeei_contig5171.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig5171.1.1 vs. uniprot
Match: B3VMZ6_FUCSE (Heat shock protein 90 (Fragment) n=1 Tax=Fucus serratus TaxID=87148 RepID=B3VMZ6_FUCSE)

HSP 1 Score: 246 bits (629), Expect = 1.790e-77
Identity = 131/154 (85.06%), Postives = 139/154 (90.26%), Query Frame = 1 
Query:    1 LLPTKTKQVVVSNRLADSPCVLVTGEYGWSANMERIMKAQALRDSSTSAYMTSKKSMEINPKNPIIAALREKAEADQSDKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSIDEDDGGAAGDD--EDLPPLDDVEGAEESTMEQV 456
            +L  K  +VVVSNRLADSPCVLVTGEYGWSANMERIMKAQALRDSSTS+YMTSKK+ME+NP N I+ ALREKA ADQSDKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSIDEDD  AAGDD  +D+P LDD EG EESTMEQV
Sbjct:  329 VLADKVDKVVVSNRLADSPCVLVTGEYGWSANMERIMKAQALRDSSTSSYMTSKKTMEVNPTNSIVVALREKASADQSDKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSIDEDD--AAGDDGEDDIPDLDDAEGDEESTMEQV 480
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BLAST of mRNA_P-wetherbeei_contig5171.1.1 vs. uniprot
Match: D7FJU9_ECTSI (Heat shock protein 90 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJU9_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 4.100e-75
Identity = 131/154 (85.06%), Postives = 139/154 (90.26%), Query Frame = 1 
Query:    1 LLPTKTKQVVVSNRLADSPCVLVTGEYGWSANMERIMKAQALRDSSTSAYMTSKKSMEINPKNPIIAALREKAEADQSDKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSIDEDDGGAAGDD--EDLPPLDDVEGAEESTMEQV 456
            +L  K  +VVVSNRLADSPCVLVTGEYGWSANMERIMKAQALRDSSTS+YMTSKK+ME+NP N I+ ALREKA ADQSDKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSIDEDD  AAGDD  +D+P LDD EG EESTMEQV
Sbjct:  561 VLVDKVDKVVVSNRLADSPCVLVTGEYGWSANMERIMKAQALRDSSTSSYMTSKKTMEVNPTNSIVVALREKASADQSDKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSIDEDD--AAGDDGDDDIPDLDDAEGDEESTMEQV 712
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BLAST of mRNA_P-wetherbeei_contig5171.1.1 vs. uniprot
Match: A0A7S3UFU9_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UFU9_9CHLO)

HSP 1 Score: 230 bits (586), Expect = 7.720e-75
Identity = 121/153 (79.08%), Postives = 135/153 (88.24%), Query Frame = 1 
Query:    1 LLPTKTKQVVVSNRLADSPCVLVTGEYGWSANMERIMKAQALRDSSTSAYMTSKKSMEINPKNPIIAALREKAEADQSDKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSIDEDDGGAAGDDEDLPPLDDVEGA-EESTMEQV 456
            +L  K  +VV+S+RL DSPCVLVTGEYGWSANMERIMKAQALRDSS+ AYM+SKK+MEINP NPII++LREKAEADQ DKTVKDLIWLLYDTSLLTSGFSLDEP TFA RIHRLIKLGLSID+D+G AA  D++LP LD+ E   EESTMEQV
Sbjct:   30 VLDDKVDKVVLSSRLNDSPCVLVTGEYGWSANMERIMKAQALRDSSSGAYMSSKKTMEINPSNPIISSLREKAEADQGDKTVKDLIWLLYDTSLLTSGFSLDEPATFANRIHRLIKLGLSIDDDEGDAADGDDELPELDEDEDLDEESTMEQV 182
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BLAST of mRNA_P-wetherbeei_contig5171.1.1 vs. uniprot
Match: A0A3S9SN07_9STRA (HSP90 n=1 Tax=Chrysoparadoxa australica TaxID=2498842 RepID=A0A3S9SN07_9STRA)

HSP 1 Score: 241 bits (616), Expect = 2.050e-73
Identity = 125/152 (82.24%), Postives = 135/152 (88.82%), Query Frame = 1 
Query:    1 LLPTKTKQVVVSNRLADSPCVLVTGEYGWSANMERIMKAQALRDSSTSAYMTSKKSMEINPKNPIIAALREKAEADQSDKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSIDEDDGGAAGDDEDLPPLDDVEGAEESTMEQV 456
            +L  K  +VVVSNRLADSPC LVTGEYGWSANMERIMKAQALRDSS+ +YM+SKK+MEINP N II+ALREKAEADQ DKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSID+DD G    D+DLPPLDDVEG + STME V
Sbjct:  553 VLDDKVDKVVVSNRLADSPCCLVTGEYGWSANMERIMKAQALRDSSSGSYMSSKKTMEINPVNSIISALREKAEADQGDKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSIDDDDEGLDDGDDDLPPLDDVEGEDASTMEMV 704
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BLAST of mRNA_P-wetherbeei_contig5171.1.1 vs. uniprot
Match: A0A836CR81_9STRA (Heat shock protein Hsp90 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR81_9STRA)

HSP 1 Score: 237 bits (604), Expect = 1.210e-71
Identity = 128/153 (83.66%), Postives = 136/153 (88.89%), Query Frame = 1 
Query:    1 LLPTKTKQVVVSNRLADSPCVLVTGEYGWSANMERIMKAQALRDSSTSAYMTSKKSMEINPKNPIIAALREKAEADQSDKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSIDEDDGGAAGDDEDLPPLDDVEGAE-ESTMEQV 456
            +L  K  +VVVSNRLADSPCVLVTGEYGWSANMERIMKAQALRDSS+++YMTSKKSMEIN  NPIIAALREKAEADQ DKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSID+DD G    DE+LPPL+  E  E ESTMEQV
Sbjct:  554 VLDDKVDKVVVSNRLADSPCVLVTGEYGWSANMERIMKAQALRDSSSASYMTSKKSMEINLANPIIAALREKAEADQGDKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSIDDDDEGGEEADEELPPLEGGEMDEGESTMEQV 706
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BLAST of mRNA_P-wetherbeei_contig5171.1.1 vs. uniprot
Match: A0A662WD93_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WD93_9STRA)

HSP 1 Score: 226 bits (576), Expect = 1.790e-71
Identity = 119/152 (78.29%), Postives = 133/152 (87.50%), Query Frame = 1 
Query:    1 LLPTKTKQVVVSNRLADSPCVLVTGEYGWSANMERIMKAQALRDSSTSAYMTSKKSMEINPKNPIIAALREKAEADQSDKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSIDEDDGGAAGDDEDLPPLDDVEGAEESTMEQV 456
            +L  K ++V +SNR+ +SPCVLVTGEYGWSANMERIMKAQALRDSSTSAYM+SKK+MEINP +PII +LREKAEAD+SDKTVKDLIWLLYDTSLLTSGFSLDEPTTFA RIHRLIKLGLSID+DD       EDLPPL+  E  EESTME+V
Sbjct:  166 VLDDKVEKVEISNRIVESPCVLVTGEYGWSANMERIMKAQALRDSSTSAYMSSKKTMEINPLHPIIKSLREKAEADKSDKTVKDLIWLLYDTSLLTSGFSLDEPTTFANRIHRLIKLGLSIDDDDEAVDDSMEDLPPLE-GEDEEESTMEEV 316
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BLAST of mRNA_P-wetherbeei_contig5171.1.1 vs. uniprot
Match: A0A6T5WSR1_9CHLO (Hypothetical protein n=2 Tax=Eukaryota TaxID=2759 RepID=A0A6T5WSR1_9CHLO)

HSP 1 Score: 220 bits (561), Expect = 8.890e-71
Identity = 119/153 (77.78%), Postives = 132/153 (86.27%), Query Frame = 1 
Query:    1 LLPTKTKQVVVSNRLADSPCVLVTGEYGWSANMERIMKAQALRDSSTSAYMTSKKSMEINPKNPIIAALREKAEADQSDKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSIDEDDGGAAGDDEDLPPLD-DVEGAEESTMEQV 456
            +L  K  +VVVS RLADSPCVLVTGEYGWSANMERIMKAQALRD+S+SAYM SKK++EINP NPI+ +LR+KAEADQSDKTVKDLIWLLYDTSLLTSGFSLDEP+TFA RIHRLIKLGLSID+     A D EDLPPL+ D    EES+MEQV
Sbjct:   49 VLDDKVDKVVVSPRLADSPCVLVTGEYGWSANMERIMKAQALRDASSSAYMASKKTLEINPTNPIVKSLRDKAEADQSDKTVKDLIWLLYDTSLLTSGFSLDEPSTFASRIHRLIKLGLSIDDXXXXXA-DIEDLPPLEEDANADEESSMEQV 200
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BLAST of mRNA_P-wetherbeei_contig5171.1.1 vs. uniprot
Match: A0A812LUW6_9DINO (HSP90 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812LUW6_9DINO)

HSP 1 Score: 218 bits (555), Expect = 1.550e-70
Identity = 111/152 (73.03%), Postives = 135/152 (88.82%), Query Frame = 1 
Query:    7 PTKTKQVVVSNRLADSPCVLVTGEYGWSANMERIMKAQALRDSSTSAYMTSKKSMEINPKNPIIAALREKAEADQSDKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSIDEDDGGAAGDDEDLPPLDDVEGA--EESTMEQV 456
            P + ++V+VS+R+ADSPCVL T EYGWSANMERIMKAQALRD+S ++YM SKK+ME+NPK+ I+A L++KA AD+SDKTVKDLIWLL+DTSLLTSGF+LDEPT FAGRIHR+IKLGLSID+DD G  GDD+DLPPL++VEGA  E S ME+V
Sbjct:    3 PAQVEKVIVSSRMADSPCVLTTSEYGWSANMERIMKAQALRDNSMTSYMVSKKTMEVNPKHSIMAELKKKAAADKSDKTVKDLIWLLFDTSLLTSGFNLDEPTQFAGRIHRMIKLGLSIDDDDEGL-GDDDDLPPLEEVEGAADEASKMEEV 153
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BLAST of mRNA_P-wetherbeei_contig5171.1.1 vs. uniprot
Match: A0A485KBE4_9STRA (Aste57867_3769 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBE4_9STRA)

HSP 1 Score: 223 bits (568), Expect = 2.160e-70
Identity = 116/152 (76.32%), Postives = 134/152 (88.16%), Query Frame = 1 
Query:    1 LLPTKTKQVVVSNRLADSPCVLVTGEYGWSANMERIMKAQALRDSSTSAYMTSKKSMEINPKNPIIAALREKAEADQSDKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSIDEDDGGAAGDDEDLPPLDDVEGAEESTMEQV 456
            +L  K ++V +S+R+ +SPCVLVTGEYGWSANMERIMKAQALRDSS+S+YM+SKK+MEINP +PII +LREKA+ D+SDKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSID+DD      D DLPPL+  EG EESTME+V
Sbjct:  156 VLDDKVEKVQISSRIVESPCVLVTGEYGWSANMERIMKAQALRDSSSSSYMSSKKTMEINPLHPIIKSLREKADVDKSDKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSIDDDDIAEENLD-DLPPLEGEEGLEESTMEEV 306
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BLAST of mRNA_P-wetherbeei_contig5171.1.1 vs. uniprot
Match: A0A418AKJ7_9STRA (HATPase_c domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A418AKJ7_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.360e-69
Identity = 116/152 (76.32%), Postives = 134/152 (88.16%), Query Frame = 1 
Query:    1 LLPTKTKQVVVSNRLADSPCVLVTGEYGWSANMERIMKAQALRDSSTSAYMTSKKSMEINPKNPIIAALREKAEADQSDKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSIDEDDGGAAGDDEDLPPLDDVEGAEESTMEQV 456
            +L  K ++V +S+R+ +SPCVLVTGEYGWSANMERIMKAQALRDSSTS+YM+SKK+MEINP +PII +LREK++ D+SDKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSID+DD      D DLPPL+  EG EESTME+V
Sbjct:  232 VLDDKVEKVQISSRIVESPCVLVTGEYGWSANMERIMKAQALRDSSTSSYMSSKKTMEINPLHPIIKSLREKSDVDKSDKTVKDLIWLLYDTSLLTSGFSLDEPTTFAGRIHRLIKLGLSIDDDDVADENLD-DLPPLEGEEGLEESTMEEV 382
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5171.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B3VMZ6_FUCSE1.790e-7785.06Heat shock protein 90 (Fragment) n=1 Tax=Fucus ser... [more]
D7FJU9_ECTSI4.100e-7585.06Heat shock protein 90 n=2 Tax=Ectocarpus TaxID=287... [more]
A0A7S3UFU9_9CHLO7.720e-7579.08Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A3S9SN07_9STRA2.050e-7382.24HSP90 n=1 Tax=Chrysoparadoxa australica TaxID=2498... [more]
A0A836CR81_9STRA1.210e-7183.66Heat shock protein Hsp90 n=1 Tax=Tribonema minus T... [more]
A0A662WD93_9STRA1.790e-7178.29Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]
A0A6T5WSR1_9CHLO8.890e-7177.78Hypothetical protein n=2 Tax=Eukaryota TaxID=2759 ... [more]
A0A812LUW6_9DINO1.550e-7073.03HSP90 protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
A0A485KBE4_9STRA2.160e-7076.32Aste57867_3769 protein n=2 Tax=Aphanomyces stellat... [more]
A0A418AKJ7_9STRA1.360e-6976.32HATPase_c domain-containing protein n=2 Tax=Aphano... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5171contigP-wetherbeei_contig5171:88..543 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FJU9
Preferred nameHSP81-3
PFAMsHATPase_c,HSP90
Model size456
Max annot lvl2759|Eukaryota
KEGG koko:K04079
KEGG Pathwayko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418
Hectar predicted targeting categoryother localisation
GOsGO:0002376,GO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005773,GO:0005774,GO:0005794,GO:0005829,GO:0005886,GO:0006457,GO:0006950,GO:0006952,GO:0006955,GO:0008150,GO:0009266,GO:0009408,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009814,GO:0009816,GO:0009987,GO:0010035,GO:0010038,GO:0012505,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0030312,GO:0031090,GO:0031974,GO:0031981,GO:0034622,GO:0042221,GO:0042742,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045087,GO:0048046,GO:0050896,GO:0051131,GO:0051592,GO:0051704,GO:0051707,GO:0051716,GO:0061077,GO:0065003,GO:0070013,GO:0070887,GO:0071241,GO:0071248,GO:0071277,GO:0071840,GO:0071944,GO:0098542,GO:0098588,GO:0098805
Exons1
Evalue6.73e-76
EggNOG OGsCOG0326@1|root,KOG0019@2759|Eukaryota
Ec32 ortholog descriptionHeat shock protein 90
Ec32 orthologEc-10_000550.1
Descriptionunfolded protein binding
Cds size456
COG categoryO
BRITEko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186776.1813655-CDS-P-wetherbeei_contig5171:87..5431683186776.1813655-CDS-P-wetherbeei_contig5171:87..543Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5171 88..543 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5171.1.1prot_P-wetherbeei_contig5171.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5171 88..543 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5171.1.1

>prot_P-wetherbeei_contig5171.1.1 ID=prot_P-wetherbeei_contig5171.1.1|Name=mRNA_P-wetherbeei_contig5171.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=152bp
LLPTKTKQVVVSNRLADSPCVLVTGEYGWSANMERIMKAQALRDSSTSAY
MTSKKSMEINPKNPIIAALREKAEADQSDKTVKDLIWLLYDTSLLTSGFS
LDEPTTFAGRIHRLIKLGLSIDEDDGGAAGDDEDLPPLDDVEGAEESTME
QV
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mRNA from alignment at P-wetherbeei_contig5171:88..543+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5171.1.1 ID=mRNA_P-wetherbeei_contig5171.1.1|Name=mRNA_P-wetherbeei_contig5171.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=456bp|location=Sequence derived from alignment at P-wetherbeei_contig5171:88..543+ (Phaeothamnion wetherbeei SAG_119_79)
CTACTGCCAACAAAAACCAAACAGGTGGTAGTGTCAAACCGGCTGGCGGA
CTCGCCGTGCGTGTTGGTGACGGGCGAGTATGGTTGGTCGGCGAACATGG
AGCGCATCATGAAGGCGCAGGCGCTGCGCGACTCCTCGACATCGGCGTAT
ATGACGTCGAAGAAGTCCATGGAGATCAATCCCAAGAACCCTATCATCGC
GGCGCTCCGGGAGAAGGCCGAAGCGGACCAATCGGACAAGACGGTCAAGG
ATCTCATCTGGCTGCTCTACGACACGTCGCTACTGACGTCAGGCTTCTCG
CTGGATGAGCCGACGACGTTCGCCGGGCGGATCCATCGGCTCATCAAGCT
GGGGCTGTCGATCGACGAGGATGATGGCGGCGCAGCGGGCGACGATGAGG
ACCTCCCGCCACTCGACGACGTTGAGGGCGCCGAGGAGAGCACTATGGAG
CAGGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5171:88..543+

>mRNA_P-wetherbeei_contig5171.1.1 ID=mRNA_P-wetherbeei_contig5171.1.1|Name=mRNA_P-wetherbeei_contig5171.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=456bp|location=Sequence derived from alignment at P-wetherbeei_contig5171:88..543+ (Phaeothamnion wetherbeei SAG_119_79)
CTACTGCCAACAAAAACCAAACAGGTGGTAGTGTCAAACCGGCTGGCGGA
CTCGCCGTGCGTGTTGGTGACGGGCGAGTATGGTTGGTCGGCGAACATGG
AGCGCATCATGAAGGCGCAGGCGCTGCGCGACTCCTCGACATCGGCGTAT
ATGACGTCGAAGAAGTCCATGGAGATCAATCCCAAGAACCCTATCATCGC
GGCGCTCCGGGAGAAGGCCGAAGCGGACCAATCGGACAAGACGGTCAAGG
ATCTCATCTGGCTGCTCTACGACACGTCGCTACTGACGTCAGGCTTCTCG
CTGGATGAGCCGACGACGTTCGCCGGGCGGATCCATCGGCTCATCAAGCT
GGGGCTGTCGATCGACGAGGATGATGGCGGCGCAGCGGGCGACGATGAGG
ACCTCCCGCCACTCGACGACGTTGAGGGCGCCGAGGAGAGCACTATGGAG
CAGGTG
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