mRNA_P-wetherbeei_contig51635.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig51635.1.1 vs. uniprot
Match: A0A838G7I6_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A838G7I6_9CHLR) HSP 1 Score: 63.9 bits (154), Expect = 1.910e-11 Identity = 33/43 (76.74%), Postives = 37/43 (86.05%), Query Frame = 1
Query: 28 RLGVAATAILLIAAVGLFAFRTLYSDRIYPAVVVGDVEVGGLT 156
RL VA +LL+AA+GLFAFRTLY DRIYPAVVVGDV VGGL+
Sbjct: 68 RLVVAIAFVLLLAAIGLFAFRTLYDDRIYPAVVVGDVNVGGLS 110
BLAST of mRNA_P-wetherbeei_contig51635.1.1 vs. uniprot
Match: A0A7W0KGP1_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0KGP1_9CHLR) HSP 1 Score: 62.8 bits (151), Expect = 1.160e-10 Identity = 33/43 (76.74%), Postives = 36/43 (83.72%), Query Frame = 1
Query: 28 RLGVAATAILLIAAVGLFAFRTLYSDRIYPAVVVGDVEVGGLT 156
RL VA LL+AA+GLFAFRTLY DRIYPAVVVGDV VGGL+
Sbjct: 71 RLVVAVAFALLLAAIGLFAFRTLYDDRIYPAVVVGDVNVGGLS 113
BLAST of mRNA_P-wetherbeei_contig51635.1.1 vs. uniprot
Match: A0A7W0PQA2_9CHLR (VanW family protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0PQA2_9CHLR) HSP 1 Score: 56.6 bits (135), Expect = 5.430e-8 Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 1
Query: 37 VAATAILLIAAVGLFAFRTLYSDRIYPAVVVGDVEVGGLT 156
+ A A+LL+ AVGLF FRT Y +RIYPA VVGDV VGGLT
Sbjct: 13 IGAMAVLLLIAVGLFVFRTWYDNRIYPAAVVGDVNVGGLT 52
BLAST of mRNA_P-wetherbeei_contig51635.1.1 vs. uniprot
Match: A0A6J4UQ75_9CHLR (Vancomycin B-type resistance protein VanW n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4UQ75_9CHLR) HSP 1 Score: 54.3 bits (129), Expect = 3.560e-7 Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 1
Query: 52 ILLIAAVGLFAFRTLYSDRIYPAVVVGDVEVGGLT 156
+LL+ +GLFAFR YS+RIYPAV VGDV VGGLT
Sbjct: 90 LLLVLTIGLFAFRAFYSERIYPAVTVGDVPVGGLT 124
BLAST of mRNA_P-wetherbeei_contig51635.1.1 vs. uniprot
Match: A0A7V9VGJ9_9CHLR (Peptidoglycan binding domain-containing protein (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9VGJ9_9CHLR) HSP 1 Score: 53.9 bits (128), Expect = 4.000e-7 Identity = 33/53 (62.26%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 4 RQAGIG--LTRLGVAATAILLIAAVGLFAFRTLYSDRIYPAVVVGDVEVGGLT 156
RQAGI L RL + LL+ AV LFAFR +Y+DR+YPAV VGDV VGGLT
Sbjct: 56 RQAGITRLLPRLVLMGAVGLLLFAVLLFAFRAVYADRVYPAVAVGDVPVGGLT 108
BLAST of mRNA_P-wetherbeei_contig51635.1.1 vs. uniprot
Match: A0A7V9AKS2_9CHLR (VanW family protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9AKS2_9CHLR) HSP 1 Score: 53.5 bits (127), Expect = 6.650e-7 Identity = 24/28 (85.71%), Postives = 26/28 (92.86%), Query Frame = 1
Query: 73 GLFAFRTLYSDRIYPAVVVGDVEVGGLT 156
GLFAFR++YSDRIYPAV VGDV VGGLT
Sbjct: 2 GLFAFRSVYSDRIYPAVTVGDVPVGGLT 29
BLAST of mRNA_P-wetherbeei_contig51635.1.1 vs. uniprot
Match: A0A7W0N9K6_9CHLR (VanW family protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0N9K6_9CHLR) HSP 1 Score: 50.1 bits (118), Expect = 1.120e-5 Identity = 22/35 (62.86%), Postives = 30/35 (85.71%), Query Frame = 1
Query: 49 AILLIAAVGLFAFRTLYSDRIYPAVVVGDVEVGGL 153
A++L+ A+G+ AFR YSDR++PAV+VGDV VGGL
Sbjct: 24 ALILLVAIGIVAFRITYSDRVFPAVMVGDVAVGGL 58
BLAST of mRNA_P-wetherbeei_contig51635.1.1 vs. uniprot
Match: A0A6J4U4A7_9CHLR (Vancomycin B-type resistance protein VanW n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4U4A7_9CHLR) HSP 1 Score: 47.8 bits (112), Expect = 7.330e-5 Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = 1
Query: 49 AILLIAAVGLFAFRTLYSDRIYPAVVVGDVEVGGL 153
A+LLIA L AFR Y+D++YPAV VGDV VGGL
Sbjct: 3 ALLLIATAALLAFRGAYADKVYPAVAVGDVPVGGL 37
BLAST of mRNA_P-wetherbeei_contig51635.1.1 vs. uniprot
Match: A0A7W0PMN9_9CHLR (VanW family protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0PMN9_9CHLR) HSP 1 Score: 47.8 bits (112), Expect = 7.340e-5 Identity = 22/34 (64.71%), Postives = 26/34 (76.47%), Query Frame = 1
Query: 55 LLIAAVGLFAFRTLYSDRIYPAVVVGDVEVGGLT 156
+L+ A+GL FR Y+ RIYPAV VGDV VGGLT
Sbjct: 83 ILLVAIGLLIFRVQYNGRIYPAVAVGDVNVGGLT 116 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51635.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig51635.1.1 >prot_P-wetherbeei_contig51635.1.1 ID=prot_P-wetherbeei_contig51635.1.1|Name=mRNA_P-wetherbeei_contig51635.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=52bp MRQAGIGLTRLGVAATAILLIAAVGLFAFRTLYSDRIYPAVVVGDVEVGGback to top mRNA from alignment at P-wetherbeei_contig51635:10..165- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig51635.1.1 ID=mRNA_P-wetherbeei_contig51635.1.1|Name=mRNA_P-wetherbeei_contig51635.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=156bp|location=Sequence derived from alignment at P-wetherbeei_contig51635:10..165- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig51635:10..165- >mRNA_P-wetherbeei_contig51635.1.1 ID=mRNA_P-wetherbeei_contig51635.1.1|Name=mRNA_P-wetherbeei_contig51635.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=156bp|location=Sequence derived from alignment at P-wetherbeei_contig51635:10..165- (Phaeothamnion wetherbeei SAG_119_79)back to top |