mRNA_P-wetherbeei_contig5155.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5155.1.1 vs. uniprot
Match: A0A836CEW1_9STRA (Hypoxia induced protein conserved region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEW1_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.290e-18 Identity = 46/105 (43.81%), Postives = 63/105 (60.00%), Query Frame = 3
Query: 135 AKFQRKAKDDPFVPIGAFATIAFLGSGLYAFQKGHQRLSQKLMRGRVLAQGATVAVLMLGATMGARRERATP------EDKFHELNAAENKWADGTIAGVPPARE 431
A F K K++P VPIG T+ FLG G+++F +G+ +SQ++MRGRVLAQG T+A LM GA M + R P E +F EL A N+WAD P ++
Sbjct: 26 AHFAEKFKEEPMVPIGMGITLGFLGFGVFSFIRGNSVMSQRMMRGRVLAQGVTLAFLMTGAAMQRDKLRRNPQTADKVEQQFQELQATPNRWADAQPYPTPSEQQ 130
BLAST of mRNA_P-wetherbeei_contig5155.1.1 vs. uniprot
Match: D8LDH4_ECTSI (HIG1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDH4_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 2.490e-18 Identity = 48/110 (43.64%), Postives = 67/110 (60.91%), Query Frame = 3
Query: 99 LAAMAHQDVSTWAKFQRKAKDDPFVPIGAFATIAFLGSGLYAFQKGHQRLSQKLMRGRVLAQGATVAVLMLGATMGARRE--RATPEDKFHELNAAENKWADGTIAGVPP 422
+ M + S + K K K +P VPIGA AT+ FL SG+Y+F++G+++LSQKLMRGRV+AQG T+ V+ G M E R T E K ++ N+W+ GVPP
Sbjct: 1 MVTMDERAPSFFEKLAVKGKKEPLVPIGALATVGFLVSGIYSFKQGNKQLSQKLMRGRVVAQGFTILVMTAGFYMAGPPEMTRQTVEGKMEAISKQTNRWS-----GVPP 105
BLAST of mRNA_P-wetherbeei_contig5155.1.1 vs. uniprot
Match: UPI00096AE975 (HIG1 domain family member 2A, mitochondrial n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096AE975) HSP 1 Score: 75.1 bits (183), Expect = 1.510e-13 Identity = 34/67 (50.75%), Postives = 50/67 (74.63%), Query Frame = 3
Query: 138 KFQRKAKDDPFVPIGAFATIAFLGSGLYAFQKGHQRLSQKLMRGRVLAQGATVAVLMLGATMGARRE 338
KF RK K++PFVPIG AT LG GL+ F+ GH+++SQ +MR R++AQG TV L++G +GA+++
Sbjct: 34 KFIRKFKENPFVPIGCLATTGALGYGLWTFRTGHRKMSQYMMRTRIVAQGLTVLALVVGVGLGAQKQ 100
BLAST of mRNA_P-wetherbeei_contig5155.1.1 vs. uniprot
Match: T1ICY2_RHOPR (HIG1 domain-containing protein (Fragment) n=2 Tax=Rhodnius TaxID=13248 RepID=T1ICY2_RHOPR) HSP 1 Score: 74.7 bits (182), Expect = 2.400e-13 Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 3
Query: 138 KFQRKAKDDPFVPIGAFATIAFLGSGLYAFQKGHQRLSQKLMRGRVLAQGATVAVLMLGATMGARRE 338
K RK K++PFVPIGA T+ L GLY+F+KG +R+SQ +MR R++AQG TV L+ G TM A ++
Sbjct: 41 KLWRKVKENPFVPIGALVTVGCLSFGLYSFRKGERRMSQMMMRARIVAQGFTVLALVGGITMAAMKK 107
BLAST of mRNA_P-wetherbeei_contig5155.1.1 vs. uniprot
Match: A0A8I6R997_CIMLE (HIG1 domain-containing protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6R997_CIMLE) HSP 1 Score: 73.2 bits (178), Expect = 5.630e-13 Identity = 41/87 (47.13%), Postives = 57/87 (65.52%), Query Frame = 3
Query: 78 INPATNLLAAMAHQDVSTWAKFQRKAKDDPFVPIGAFATIAFLGSGLYAFQKGHQRLSQKLMRGRVLAQGATVAVLMLGATMGARRE 338
I P ++LA + +T+ KFQRK K++PFVPIGA AT A L G+ F KG+ + SQ +MR RV+AQG TVA L+ G + +R+
Sbjct: 13 IQPGESILA----NEETTFEKFQRKFKENPFVPIGALATAACLFYGVRNFYKGNTKNSQLMMRARVVAQGLTVAALVGGILLAPKRK 95
BLAST of mRNA_P-wetherbeei_contig5155.1.1 vs. uniprot
Match: Q66GV5_XENLA (HIG1 hypoxia inducible domain family member 2A S homeolog n=4 Tax=Xenopus TaxID=8353 RepID=Q66GV5_XENLA) HSP 1 Score: 72.8 bits (177), Expect = 7.430e-13 Identity = 38/71 (53.52%), Postives = 48/71 (67.61%), Query Frame = 3
Query: 135 AKFQRKAKDDPFVPIGAFATIAFLGSGLYAFQKGHQRLSQKLMRGRVLAQGATVAVLMLGATMGARRERAT 347
+KF RK K++PFVPIG AT L GL +F++G R SQ LMR R+LAQG TVA +M+G M A + R T
Sbjct: 21 SKFIRKVKENPFVPIGCLATAGALTYGLISFKQGKTRQSQLLMRTRILAQGFTVAAIMVGVVMTAMKPRDT 91
BLAST of mRNA_P-wetherbeei_contig5155.1.1 vs. uniprot
Match: A0A0L0BNR6_LUCCU (HIG1 domain-containing protein n=1 Tax=Lucilia cuprina TaxID=7375 RepID=A0A0L0BNR6_LUCCU) HSP 1 Score: 72.4 bits (176), Expect = 1.240e-12 Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 3
Query: 126 STWAKFQRKAKDDPFVPIGAFATIAFLGSGLYAFQKGHQRLSQKLMRGRVLAQGATVAVLMLGATM 323
ST K RK K++P VPIG AT + LG GLY F+ G++++SQ +MR R+LAQG TVA L+ G M
Sbjct: 29 STKEKMMRKIKENPLVPIGCLATASALGFGLYNFRTGNRKMSQMMMRARILAQGFTVAALVTGVVM 94
BLAST of mRNA_P-wetherbeei_contig5155.1.1 vs. uniprot
Match: A0A1B0EUC2_GLOMM (HIG1 domain-containing protein n=6 Tax=Glossina TaxID=7393 RepID=A0A1B0EUC2_GLOMM) HSP 1 Score: 72.4 bits (176), Expect = 1.310e-12 Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 3
Query: 126 STWAKFQRKAKDDPFVPIGAFATIAFLGSGLYAFQKGHQRLSQKLMRGRVLAQGATVAVLMLGATM 323
+T K RK K++P VPIG AT + LG GLY F+ G++R+SQ +MR R++AQG TVA L++G M
Sbjct: 31 TTKEKMMRKIKENPLVPIGCLATASALGFGLYNFRTGNRRMSQMMMRARIIAQGFTVAALVVGVVM 96
BLAST of mRNA_P-wetherbeei_contig5155.1.1 vs. uniprot
Match: UPI0011833138 (HIG1 domain family member 2A, mitochondrial n=1 Tax=Manduca sexta TaxID=7130 RepID=UPI0011833138) HSP 1 Score: 71.6 bits (174), Expect = 2.340e-12 Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 3
Query: 111 AHQDVSTWAKFQRKAKDDPFVPIGAFATIAFLGSGLYAFQKGHQRLSQKLMRGRVLAQGATVAVLMLGATMGA 329
AH +T KF RK ++PFVP+G AT L GL++F+ G ++LSQ++MR R++AQG T+A L++G M A
Sbjct: 22 AHHVETTSEKFGRKITENPFVPLGCLATAGALSFGLWSFRTGRRKLSQQMMRARIVAQGFTIAALVVGVMMTA 94
BLAST of mRNA_P-wetherbeei_contig5155.1.1 vs. uniprot
Match: UPI0015684B40 (HIG1 domain family member 2A, mitochondrial-like n=2 Tax=Maniola TaxID=111919 RepID=UPI0015684B40) HSP 1 Score: 71.6 bits (174), Expect = 2.400e-12 Identity = 35/72 (48.61%), Postives = 48/72 (66.67%), Query Frame = 3
Query: 114 HQDVSTWAKFQRKAKDDPFVPIGAFATIAFLGSGLYAFQKGHQRLSQKLMRGRVLAQGATVAVLMLGATMGA 329
H+ +T KF RK ++PFVPIG AT L GL+ F+ +LSQK+MR R++AQG T+A L++G MGA
Sbjct: 22 HRVETTQEKFVRKFSENPFVPIGCLATAGALSYGLWCFRTKRSKLSQKMMRVRIVAQGFTIAALVVGVVMGA 93 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5155.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5155.1.1 >prot_P-wetherbeei_contig5155.1.1 ID=prot_P-wetherbeei_contig5155.1.1|Name=mRNA_P-wetherbeei_contig5155.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=110bp MAHQDVSTWAKFQRKAKDDPFVPIGAFATIAFLGSGLYAFQKGHQRLSQKback to top mRNA from alignment at P-wetherbeei_contig5155:498..1713- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5155.1.1 ID=mRNA_P-wetherbeei_contig5155.1.1|Name=mRNA_P-wetherbeei_contig5155.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1216bp|location=Sequence derived from alignment at P-wetherbeei_contig5155:498..1713- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5155:498..1713- >mRNA_P-wetherbeei_contig5155.1.1 ID=mRNA_P-wetherbeei_contig5155.1.1|Name=mRNA_P-wetherbeei_contig5155.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=330bp|location=Sequence derived from alignment at P-wetherbeei_contig5155:498..1713- (Phaeothamnion wetherbeei SAG_119_79)back to top |