mRNA_P-wetherbeei_contig5154.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5154.3.1
Unique NamemRNA_P-wetherbeei_contig5154.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5154.3.1 vs. uniprot
Match: A0A1Q7VP86_9PROT (MFS transporter n=1 Tax=Betaproteobacteria bacterium 13_1_20CM_3_63_8 TaxID=1805040 RepID=A0A1Q7VP86_9PROT)

HSP 1 Score: 400 bits (1029), Expect = 2.640e-137
Identity = 196/323 (60.68%), Postives = 246/323 (76.16%), Query Frame = 1
Query:    1 MNRILLSMGVLSLLGAAGGAQAEYPERPIRLIIPSAAGGSPDVVTRILALELVKQMGQQIVIDNRPGASYTIGTDMIVRANPDGYTIGYANVVSLAINKSLLPKAQQPYDPDKDLVVVGQFLSTYNMLAVTNALPVKSVKELIDYARQNPGKLTNASGGNGTTGHLGGELFKIMTGTQIVHVPYKGSPQGISDLIGGQVQLMFDNLTSISPHVRSGKVRGIGVSSSKRSPIFPDIPTIAEAGVPGYETNAWGGLVVPVGTPKAVVTKLNSEVNKALQATALKERYAAIEAEPVGGTPEAFTAFARKETAKWADVIKKSGAKLD 969
            M ++L +   L L   + GA A YPE+PIR +IPSAAGGSPDV+ RIL  +L  QMG   V++N+PGAS+TIGT  IVRA PDGYT+GY N+VSLAIN+SLL K   PYD ++DL ++   +  +N+LAV N LPV +V ELIDYA++NPGKL  AS GNGTTGHLGGELFK MTGT I+HVPY+GSP  I+DLI G+VQLMFDN+ SI  H +SG+VRGI VS  +RSP+FP++PTIAEAGVPGYET AWGG++ P   P+ +V +LN E+  AL A  + ERY  ++AEP GGTPE F A  R+ET KWADV+++SGAK+D
Sbjct:    1 MRKVLFA---LLLFACSAGAAAGYPEKPIRFVIPSAAGGSPDVLMRILTQQLSAQMGVAFVVENKPGASFTIGTMDIVRAAPDGYTLGYGNIVSLAINRSLLAKV--PYDVERDLTLIANCVRVFNLLAVNNRLPVHTVPELIDYAKKNPGKLVMASSGNGTTGHLGGELFKAMTGTFILHVPYRGSPPAINDLIAGEVQLMFDNIASIGAHAKSGRVRGIAVSGPRRSPVFPELPTIAEAGVPGYETVAWGGVIAPAHLPQDIVARLNREIRAALAAPGVSERYQQLDAEPDGGTPEEFAALVRRETPKWADVVQRSGAKVD 318          
BLAST of mRNA_P-wetherbeei_contig5154.3.1 vs. uniprot
Match: A0A537BEL2_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BEL2_9PROT)

HSP 1 Score: 391 bits (1005), Expect = 1.250e-133
Identity = 188/316 (59.49%), Postives = 246/316 (77.85%), Query Frame = 1
Query:   22 MGVLSLLGAAGGAQAEYPERPIRLIIPSAAGGSPDVVTRILALELVKQMGQQIVIDNRPGASYTIGTDMIVRANPDGYTIGYANVVSLAINKSLLPKAQQPYDPDKDLVVVGQFLSTYNMLAVTNALPVKSVKELIDYARQNPGKLTNASGGNGTTGHLGGELFKIMTGTQIVHVPYKGSPQGISDLIGGQVQLMFDNLTSISPHVRSGKVRGIGVSSSKRSPIFPDIPTIAEAGVPGYETNAWGGLVVPVGTPKAVVTKLNSEVNKALQATALKERYAAIEAEPVGGTPEAFTAFARKETAKWADVIKKSGAKLD 969
            + V+ L   A  AQA YPE+PIR ++PSA GGS DV+ RIL  +L  QMG   V++N+PGAS+  GT  IV+A PDGYT+GY N+VSLA+N++LLP    PYD +KDL +V   +  +NMLAV N LPV++V ELIDYA++NPGKL+N S GNGTTGHLGGELFK MTGT++VHVPYKGS Q I+DL+ G +++MFDN+ SI PHV+SG+VRG+GVS+ KR+  FP++PTIAEAGVPGYETN+WGG++ P    + V+++LN+E+ KAL A A+ ERY  ++AEP GG PEAF    R+ET KWA+VI++SGAK+D
Sbjct:    7 LAVVLLAAFAVPAQAAYPEKPIRFVVPSAPGGSVDVLMRILTQQLSAQMGVAFVVENKPGASFVPGTMDIVKAAPDGYTLGYGNIVSLAVNRTLLPAL--PYDVEKDLTLVSNCVRVFNMLAVNNGLPVRTVAELIDYAKKNPGKLSNGSSGNGTTGHLGGELFKAMTGTEMVHVPYKGSAQAINDLVAGNIEVMFDNVPSIGPHVKSGRVRGLGVSAPKRAAQFPELPTIAEAGVPGYETNSWGGVIGPARLSREVISRLNAEIRKALAAPAVAERYRQLDAEPDGGGPEAFLELVRRETPKWAEVIRRSGAKVD 320          
BLAST of mRNA_P-wetherbeei_contig5154.3.1 vs. uniprot
Match: A0A536Y9M7_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536Y9M7_9PROT)

HSP 1 Score: 385 bits (990), Expect = 2.150e-131
Identity = 186/311 (59.81%), Postives = 238/311 (76.53%), Query Frame = 1
Query:   37 LLGAAGGAQAEYPERPIRLIIPSAAGGSPDVVTRILALELVKQMGQQIVIDNRPGASYTIGTDMIVRANPDGYTIGYANVVSLAINKSLLPKAQQPYDPDKDLVVVGQFLSTYNMLAVTNALPVKSVKELIDYARQNPGKLTNASGGNGTTGHLGGELFKIMTGTQIVHVPYKGSPQGISDLIGGQVQLMFDNLTSISPHVRSGKVRGIGVSSSKRSPIFPDIPTIAEAGVPGYETNAWGGLVVPVGTPKAVVTKLNSEVNKALQATALKERYAAIEAEPVGGTPEAFTAFARKETAKWADVIKKSGAKLD 969
            LL  A  A A YPE+PIR IIPSA GGSPDV+ RIL  +L  Q+   +V++N+PG SY +GT  IV+A PDGYT+GY N+VSLAIN+SLLP    PY+ ++DL ++      +N+L V N LPV+SV+ELIDYA++NPGKLTN S GNGTTGHLGGELFK MTG  IVHVPYKGS Q I+DLIGGQ+Q+MFDN+ SI P V++G+VRG+GVS+ KR+  FPDIPTIAEAGVPGYETN+WGG++ P   P+ VV KL +E+  AL   ++ +RY  +++E  G TPE F A  R+ET KWA+V+++SGAK+D
Sbjct:    9 LLVLAAAASAAYPEKPIRFIIPSAPGGSPDVLMRILTQQLSLQLNVPLVVENKPGGSYVLGTMDIVKAPPDGYTLGYGNIVSLAINRSLLPSL--PYEVERDLTLISNVTHVFNLLVVNNDLPVRSVRELIDYAKKNPGKLTNGSSGNGTTGHLGGELFKSMTGVDIVHVPYKGSAQAINDLIGGQIQVMFDNVPSIGPQVKAGRVRGLGVSAPKRAASFPDIPTIAEAGVPGYETNSWGGVIGPARLPREVVQKLTTEIRAALAVPSVAQRYRQLDSEIDGSTPEEFLALVRRETPKWAEVVRRSGAKID 317          
BLAST of mRNA_P-wetherbeei_contig5154.3.1 vs. uniprot
Match: A0A1Q7BDC8_9PROT (MFS transporter n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BDC8_9PROT)

HSP 1 Score: 384 bits (986), Expect = 8.400e-131
Identity = 184/323 (56.97%), Postives = 248/323 (76.78%), Query Frame = 1
Query:    1 MNRILLSMGVLSLLGAAGGAQAEYPERPIRLIIPSAAGGSPDVVTRILALELVKQMGQQIVIDNRPGASYTIGTDMIVRANPDGYTIGYANVVSLAINKSLLPKAQQPYDPDKDLVVVGQFLSTYNMLAVTNALPVKSVKELIDYARQNPGKLTNASGGNGTTGHLGGELFKIMTGTQIVHVPYKGSPQGISDLIGGQVQLMFDNLTSISPHVRSGKVRGIGVSSSKRSPIFPDIPTIAEAGVPGYETNAWGGLVVPVGTPKAVVTKLNSEVNKALQATALKERYAAIEAEPVGGTPEAFTAFARKETAKWADVIKKSGAKLD 969
            M R+LL +  ++L      A A YPE+P+R IIPSA GGSPDV+ RIL  ++ +QMG   V++N+PGAS+ +GT  +V+A  DGYT+GY N+VSLA+N+SLL  +  PYD ++DL +V      +NMLAV N LPV +V EL+DYA++NPGKLTN S GNGTTGHLGGELFK +TG ++VHVPYKGS Q I+DL+GGQ+Q+MFDN+ SI PHV++G+VRG+GVS+ KR+  FPDIPTIAEAGVPGYETN+WGG++ P   P+ +V +L++E+  AL   ++ ERY  +++E  GGTPE F A  R+ET KWA+V+++SGAK+D
Sbjct:    1 MRRLLLLLAFVAL-----PAHAVYPEKPVRFIIPSAPGGSPDVLMRILLQQMSQQMGVAFVVENKPGASFVLGTMDVVKAPADGYTLGYGNIVSLAVNRSLL--SSLPYDVERDLTLVSNVTHVFNMLAVNNNLPVHTVAELVDYAKRNPGKLTNGSSGNGTTGHLGGELFKALTGIEMVHVPYKGSAQAINDLMGGQIQVMFDNVPSIGPHVKAGRVRGLGVSAPKRAASFPDIPTIAEAGVPGYETNSWGGIIGPAKLPRDIVLRLHTEIRAALAVPSVVERYRQLDSEIDGGTPEEFLALVRRETPKWAEVVRRSGAKID 316          
BLAST of mRNA_P-wetherbeei_contig5154.3.1 vs. uniprot
Match: A0A177R1U9_9PROT (MFS transporter n=1 Tax=Betaproteobacteria bacterium SCGC AG-212-J23 TaxID=1799662 RepID=A0A177R1U9_9PROT)

HSP 1 Score: 378 bits (971), Expect = 1.540e-128
Identity = 188/311 (60.45%), Postives = 236/311 (75.88%), Query Frame = 1
Query:   37 LLGAAGGAQAEYPERPIRLIIPSAAGGSPDVVTRILALELVKQMGQQIVIDNRPGASYTIGTDMIVRANPDGYTIGYANVVSLAINKSLLPKAQQPYDPDKDLVVVGQFLSTYNMLAVTNALPVKSVKELIDYARQNPGKLTNASGGNGTTGHLGGELFKIMTGTQIVHVPYKGSPQGISDLIGGQVQLMFDNLTSISPHVRSGKVRGIGVSSSKRSPIFPDIPTIAEAGVPGYETNAWGGLVVPVGTPKAVVTKLNSEVNKALQATALKERYAAIEAEPVGGTPEAFTAFARKETAKWADVIKKSGAKLD 969
            LL A G A A +PE+PIR ++PSA GGSPDV+ RILA +L  Q+G   VIDN+PGASY  GT  IVRA PDGYT+GY N+VSLAIN SLL K   PY  ++DL +V   ++ +NMLAV+N LPV++V ELI+YAR+NPGKLTN S GNGTTGHLGGELFK+MTG  +VH PYKGSPQ I+DL+ G++Q+MFDN+ SI PHV++GKVRG+GVSS  R+  FP IP IAE+ VPGY+TNAWGG++ P G P  +V +L+ E+ KAL A  + ERY  ++ EP G  PEAF    R+ET KW DV+ +SGAK+D
Sbjct:    8 LLFAFGAAHAAWPEKPIRFVVPSAPGGSPDVLMRILAQQLSVQLGVPFVIDNKPGASYVPGTMDIVRAPPDGYTLGYGNIVSLAINYSLLQKV--PYLVERDLTLVSNCVNVFNMLAVSNDLPVRTVPELIEYARKNPGKLTNGSSGNGTTGHLGGELFKMMTGISMVHAPYKGSPQAINDLMAGRIQVMFDNVPSIGPHVKAGKVRGLGVSSLVRAAQFPQIPAIAES-VPGYQTNAWGGVIGPAGLPPEIVKRLSLEIRKALAAPEVAERYRVLDTEPDGSGPEAFAELVRRETRKWGDVVSRSGAKVD 315          
BLAST of mRNA_P-wetherbeei_contig5154.3.1 vs. uniprot
Match: A0A7C2UPR9_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2UPR9_9PROT)

HSP 1 Score: 370 bits (949), Expect = 4.290e-125
Identity = 177/300 (59.00%), Postives = 230/300 (76.67%), Query Frame = 1
Query:   70 YPERPIRLIIPSAAGGSPDVVTRILALELVKQMGQQIVIDNRPGASYTIGTDMIVRANPDGYTIGYANVVSLAINKSLLPKAQQPYDPDKDLVVVGQFLSTYNMLAVTNALPVKSVKELIDYARQNPGKLTNASGGNGTTGHLGGELFKIMTGTQIVHVPYKGSPQGISDLIGGQVQLMFDNLTSISPHVRSGKVRGIGVSSSKRSPIFPDIPTIAEAGVPGYETNAWGGLVVPVGTPKAVVTKLNSEVNKALQATALKERYAAIEAEPVGGTPEAFTAFARKETAKWADVIKKSGAKLD 969
            YP RPIRLI+P A G + D V RI+A EL +Q+ QQ+V+DNRPG + TIG DM+V+A PDGYTIG+  V +LAI+ +++ K   PYD DKDL  + Q  S   +LA + A P KSV+++I YA+QNPGKL+NAS GNGT GH+G ELFK MTGTQIVHVPYKG   GI+DLI GQVQLM ++  SI+PH ++G+VRG+ V+++KRS   PD+PTIAEAGVPGYE   W G+V P G PKA+V KLN+E+N+AL++ +++ER+AAI AEP  GTPE F    R+E AKWADVI++SGA++D
Sbjct:   25 YPSRPIRLIVPQAPGSASDNVARIIAAELTRQLAQQVVVDNRPGGALTIGIDMVVKAPPDGYTIGFGPVGALAISPNMVRKL--PYDVDKDLQAIAQLASNQMVLAASPATPFKSVRDVIAYAKQNPGKLSNASSGNGTPGHVGFELFKFMTGTQIVHVPYKGGAAGIADLITGQVQLMMESQNSITPHAKAGRVRGLAVTAAKRSSALPDLPTIAEAGVPGYEATTWNGIVAPAGVPKAIVAKLNAEINRALESASVRERFAAIGAEPASGTPEQFRELIRRENAKWADVIRRSGARID 322          
BLAST of mRNA_P-wetherbeei_contig5154.3.1 vs. uniprot
Match: A0A1F4E313_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4E313_9PROT)

HSP 1 Score: 364 bits (934), Expect = 7.850e-123
Identity = 185/323 (57.28%), Postives = 238/323 (73.68%), Query Frame = 1
Query:    1 MNRILLSMGVLSLLGAAGGAQAEYPERPIRLIIPSAAGGSPDVVTRILALELVKQMGQQIVIDNRPGASYTIGTDMIVRANPDGYTIGYANVVSLAINKSLLPKAQQPYDPDKDLVVVGQFLSTYNMLAVTNALPVKSVKELIDYARQNPGKLTNASGGNGTTGHLGGELFKIMTGTQIVHVPYKGSPQGISDLIGGQVQLMFDNLTSISPHVRSGKVRGIGVSSSKRSPIFPDIPTIAEAGVPGYETNAWGGLVVPVGTPKAVVTKLNSEVNKALQATALKERYAAIEAEPVGGTPEAFTAFARKETAKWADVIKKSGAKLD 969
            M  + L +   S+  A     A YPERPIR I+PSA GGSPD+  R L  EL +QMGQQ+V+DNR GAS  IGT++I RA PDGYTIG     +LA  +SLLPK   PYDPDKD   V QF  T N+LAVT +LPVKSV+ELID+A++NPG L  AS G+G+T HLGGELFK+MTGTQ+VHVP+K     ++DL  G+V LMF+++ SI PHV++G++RG+ V+S KRS  FP++PT++EAGVPG+E  AW G++ P  TPKA+VT+LN+E+NKAL + A+ E+  A+  E VGGTPE F    +KE +KWADVIK+SGAKLD
Sbjct:    1 MRTVGLLLIFWSISTATFDVAAAYPERPIRYIVPSAPGGSPDITARTLTAELSRQMGQQVVVDNRVGASGIIGTELIARAAPDGYTIGQGLTPALATMRSLLPKI--PYDPDKDFQPVVQFYFTPNLLAVTLSLPVKSVRELIDHAKKNPGALLFASSGSGSTFHLGGELFKLMTGTQMVHVPFKAVQLAMTDLTAGRVHLMFNSVASIEPHVKAGRLRGLAVTSVKRSVAFPELPTVSEAGVPGFEVVAWAGVIAPAKTPKAIVTRLNAEINKALASPAVGEKLTALGYELVGGTPEQFAEHVKKEVSKWADVIKRSGAKLD 321          
BLAST of mRNA_P-wetherbeei_contig5154.3.1 vs. uniprot
Match: J3CTP4_9BURK (Uncharacterized protein n=2 Tax=unclassified Polaromonas TaxID=2638319 RepID=J3CTP4_9BURK)

HSP 1 Score: 355 bits (912), Expect = 2.030e-119
Identity = 182/322 (56.52%), Postives = 229/322 (71.12%), Query Frame = 1
Query:    4 NRILLSMGVLSLLGAAGGAQAEYPERPIRLIIPSAAGGSPDVVTRILALELVKQMGQQIVIDNRPGASYTIGTDMIVRANPDGYTIGYANVVSLAINKSLLPKAQQPYDPDKDLVVVGQFLSTYNMLAVTNALPVKSVKELIDYARQNPGKLTNASGGNGTTGHLGGELFKIMTGTQIVHVPYKGSPQGISDLIGGQVQLMFDNLTSISPHVRSGKVRGIGVSSSKRSPIFPDIPTIAEAGVPGYETNAWGGLVVPVGTPKAVVTKLNSEVNKALQATALKERYAAIEAEPVGGTPEAFTAFARKETAKWADVIKKSGAKLD 969
             R  L +G  ++  +   A+A +P+RPIRLI+PSAAGGSPD + RIL  EL+K +GQ  VIDN+PGAS  IG   IVRA PDGYT+GY NV +LAINKSL  K   PYDP+K LV V       N L V N L VK+V ELI  AR  PGKL+ AS GNGTTGHLGGELFK MTGT + HVPY+GSPQ I DL+GGQV LMFDNL+SI+PH+++G+++ +GVS   RSP+FP++P I E  V GYET AWGG+V P GTP+ VV +LN E+NK L + A+ ERYAAI  E   G+P+     A +ET  W +V+K++G ++D
Sbjct:    8 RRTFLKLGAAAMASSPLLARAAWPDRPIRLIVPSAAGGSPDNICRILTSELMKALGQPFVIDNKPGASGNIGMQEIVRAAPDGYTLGYGNVGTLAINKSLFSKL--PYDPEKQLVPVALLGYVQNALVVRNDLGVKNVAELIALARSRPGKLSMASPGNGTTGHLGGELFKSMTGTFMTHVPYRGSPQAIQDLMGGQVDLMFDNLSSIAPHIKNGRIKALGVSGRARSPLFPEVPAIGEF-VKGYETTAWGGIVAPAGTPRDVVMRLNGEINKVLGSAAVNERYAAISFETTIGSPDRLFDRALRETRMWTEVVKRAGVQVD 326          
BLAST of mRNA_P-wetherbeei_contig5154.3.1 vs. uniprot
Match: F5Y1S4_RAMTT (Extracytoplasmic binding receptor-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) TaxID=365046 RepID=F5Y1S4_RAMTT)

HSP 1 Score: 353 bits (907), Expect = 1.020e-118
Identity = 185/325 (56.92%), Postives = 234/325 (72.00%), Query Frame = 1
Query:    1 MNRILLSMGVL--SLLGAAGGAQAEYPERPIRLIIPSAAGGSPDVVTRILALELVKQMGQQIVIDNRPGASYTIGTDMIVRANPDGYTIGYANVVSLAINKSLLPKAQQPYDPDKDLVVVGQFLSTYNMLAVTNALPVKSVKELIDYARQNPGKLTNASGGNGTTGHLGGELFKIMTGTQIVHVPYKGSPQGISDLIGGQVQLMFDNLTSISPHVRSGKVRGIGVSSSKRSPIFPDIPTIAEAGVPGYETNAWGGLVVPVGTPKAVVTKLNSEVNKALQATALKERYAAIEAEPVGGTPEAFTAFARKETAKWADVIKKSGAKLD 969
            M   +LS+ +L  +LL     A A +P++PIRLIIPSAAGG+PDV+ R L+ +L +Q+G   VI+NRPGASYTIGT  +VR+  DGYT+ YANVVSLA N+SLLP    PYD DKDL ++   L   N++AV N++PV+SV ELI YAR+NPGKL  AS GNGTT HLG ELFK MTGT ++HVPYKG+   ++DLIGG VQL   N   + PH ++G+VR +G+SS +RSP +PDIP IAEA VPG+E  AWGGLV P   P+ +V +LNSE+  AL   A++ER+ A+ AE    TPE F   AR ETAKWA V+K SGAKLD
Sbjct:    1 MRPRILSVFLLLAALLAPVAPAFAAWPDKPIRLIIPSAAGGAPDVLMRALSAQLSQQLGVPFVIENRPGASYTIGTMELVRSPADGYTLAYANVVSLATNRSLLPNV--PYDVDKDLTLISNALRVVNLMAVNNSVPVRSVPELIAYARKNPGKLAFASDGNGTTSHLGVELFKSMTGTFMLHVPYKGATAAVTDLIGGGVQLFMANTPVLGPHAQAGRVRALGISSPQRSPAYPDIPAIAEA-VPGFEVVAWGGLVGPANLPREIVQRLNSEIRTALATPAVQERFKALGAEAAPSTPEEFRELARSETAKWAKVVKSSGAKLD 322          
BLAST of mRNA_P-wetherbeei_contig5154.3.1 vs. uniprot
Match: A0A3N5NLH3_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5NLH3_9PROT)

HSP 1 Score: 353 bits (906), Expect = 1.830e-118
Identity = 177/327 (54.13%), Postives = 235/327 (71.87%), Query Frame = 1
Query:    4 NRILLSMGVLSLLGAAGGAQ-----AEYPERPIRLIIPSAAGGSPDVVTRILALELVKQMGQQIVIDNRPGASYTIGTDMIVRANPDGYTIGYANVVSLAINKSLLPKAQQPYDPDKDLVVVGQFLSTYNMLAVTNALPVKSVKELIDYARQNPGKLTNASGGNGTTGHLGGELFKIMTGTQIVHVPYKGSPQGISDLIGGQVQLMFDNLTSISPHVRSGKVRGIGVSSSKRSPIFPDIPTIAEAGVPGYETNAWGGLVVPVGTPKAVVTKLNSEVNKALQATALKERYAAIEAEPVGGTPEAFTAFARKETAKWADVIKKSGAKLD 969
             R L++   + ++G A GA      + YPERPIRLI+P A G S D + RI+ALEL K +GQQIV+DNRPG +  IG ++I RA PDGYTIGYA + +L I+ +L+ K   P+D  +D   +GQ      +LA + A P+KSV+++I+YA+QNPGKL+NAS GNGT GH+G ELFK MTGT+IVHVPYKG   GI+DLI GQVQLM + + SI+PH ++ +VR + VS++KRS   P++PTIAEAGVPGYE + W G+V P G P+A+V KLN+ +NKAL +T ++ER AAI AEP   TPE F    R E  KWADV+K+SGA++D
Sbjct:    5 TRNLIAAAAVGVIGCAAGAACAADASRYPERPIRLIVPQAPGSSSDTLARIVALELTKHVGQQIVVDNRPGGALIIGMELIARAAPDGYTIGYAPIGALVISPNLVRKV--PFDVRRDFQPIGQTAHGNMLLAASPAGPLKSVRDVIEYAKQNPGKLSNASSGNGTPGHVGFELFKTMTGTRIVHVPYKGGAAGIADLISGQVQLMLEGMNSITPHAKANRVRALAVSAAKRSNALPEVPTIAEAGVPGYEASTWNGIVGPAGMPRAIVVKLNAALNKALVSTTVRERLAAIGAEPTPVTPEQFGDLIRSEYVKWADVVKRSGARVD 329          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5154.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Q7VP86_9PROT2.640e-13760.68MFS transporter n=1 Tax=Betaproteobacteria bacteri... [more]
A0A537BEL2_9PROT1.250e-13359.49Tripartite tricarboxylate transporter substrate bi... [more]
A0A536Y9M7_9PROT2.150e-13159.81Tripartite tricarboxylate transporter substrate bi... [more]
A0A1Q7BDC8_9PROT8.400e-13156.97MFS transporter n=1 Tax=Alphaproteobacteria bacter... [more]
A0A177R1U9_9PROT1.540e-12860.45MFS transporter n=1 Tax=Betaproteobacteria bacteri... [more]
A0A7C2UPR9_9PROT4.290e-12559.00Tripartite tricarboxylate transporter substrate bi... [more]
A0A1F4E313_9PROT7.850e-12357.28Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
J3CTP4_9BURK2.030e-11956.52Uncharacterized protein n=2 Tax=unclassified Polar... [more]
F5Y1S4_RAMTT1.020e-11856.92Extracytoplasmic binding receptor-like protein n=1... [more]
A0A3N5NLH3_9PROT1.830e-11854.13Tripartite tricarboxylate transporter substrate bi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5154contigP-wetherbeei_contig5154:2762..3733 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog365046.Rta_12400
PFAMsTctC
Model size972
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.67e-119
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1R9EF@1224|Proteobacteria,2VNKU@28216|Betaproteobacteria,4AGJ5@80864|Comamonadaceae
DescriptionTripartite tricarboxylate transporter family receptor
Cds size972
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186774.337089-CDS-P-wetherbeei_contig5154:2761..37331683186774.337089-CDS-P-wetherbeei_contig5154:2761..3733Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5154 2762..3733 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5154.3.1prot_P-wetherbeei_contig5154.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5154 2762..3733 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5154.3.1

>prot_P-wetherbeei_contig5154.3.1 ID=prot_P-wetherbeei_contig5154.3.1|Name=mRNA_P-wetherbeei_contig5154.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=324bp
MNRILLSMGVLSLLGAAGGAQAEYPERPIRLIIPSAAGGSPDVVTRILAL
ELVKQMGQQIVIDNRPGASYTIGTDMIVRANPDGYTIGYANVVSLAINKS
LLPKAQQPYDPDKDLVVVGQFLSTYNMLAVTNALPVKSVKELIDYARQNP
GKLTNASGGNGTTGHLGGELFKIMTGTQIVHVPYKGSPQGISDLIGGQVQ
LMFDNLTSISPHVRSGKVRGIGVSSSKRSPIFPDIPTIAEAGVPGYETNA
WGGLVVPVGTPKAVVTKLNSEVNKALQATALKERYAAIEAEPVGGTPEAF
TAFARKETAKWADVIKKSGAKLD*
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mRNA from alignment at P-wetherbeei_contig5154:2762..3733-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5154.3.1 ID=mRNA_P-wetherbeei_contig5154.3.1|Name=mRNA_P-wetherbeei_contig5154.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=972bp|location=Sequence derived from alignment at P-wetherbeei_contig5154:2762..3733- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACAGGATACTGTTGTCGATGGGCGTGCTTTCATTGCTCGGCGCGGC GGGCGGCGCGCAAGCCGAGTACCCGGAGCGCCCGATCCGCCTCATCATTC CGTCCGCGGCCGGCGGCTCGCCCGACGTCGTGACGCGCATACTCGCGCTC GAGCTGGTCAAGCAGATGGGCCAGCAGATCGTCATCGACAATCGCCCCGG CGCCAGCTACACCATCGGCACCGACATGATCGTGCGCGCCAATCCCGACG GCTATACGATCGGCTACGCCAACGTGGTGTCGCTCGCCATCAATAAATCG CTGCTGCCCAAAGCGCAGCAGCCGTACGATCCAGACAAGGATCTCGTCGT CGTCGGCCAGTTCCTGTCGACTTACAACATGCTCGCGGTGACCAACGCTC TGCCGGTAAAGTCGGTCAAGGAATTGATCGATTATGCGCGGCAAAACCCG GGCAAGTTGACGAATGCGTCGGGCGGCAACGGCACCACCGGCCATCTCGG CGGCGAGCTCTTCAAGATCATGACCGGCACGCAGATCGTGCACGTGCCGT ACAAAGGCAGCCCGCAGGGGATTTCGGACCTGATCGGCGGCCAGGTGCAA CTGATGTTCGACAACCTGACTTCGATTTCGCCTCACGTGCGCTCGGGCAA GGTGCGCGGCATCGGCGTCAGCAGCAGCAAGCGCTCGCCGATATTTCCCG ATATTCCGACCATAGCGGAAGCCGGCGTGCCCGGTTACGAGACCAACGCG TGGGGCGGGCTCGTGGTGCCCGTCGGCACGCCGAAGGCCGTCGTGACGAA ACTCAACAGCGAAGTCAACAAAGCGTTGCAGGCGACCGCCCTGAAAGAGC GCTACGCCGCGATCGAAGCCGAACCGGTCGGCGGCACGCCGGAAGCATTC ACGGCGTTCGCCCGCAAGGAAACCGCGAAGTGGGCGGACGTCATCAAGAA ATCCGGCGCCAAACTCGATTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5154:2762..3733-

>mRNA_P-wetherbeei_contig5154.3.1 ID=mRNA_P-wetherbeei_contig5154.3.1|Name=mRNA_P-wetherbeei_contig5154.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=972bp|location=Sequence derived from alignment at P-wetherbeei_contig5154:2762..3733- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACAGGATACTGTTGTCGATGGGCGTGCTTTCATTGCTCGGCGCGGC
GGGCGGCGCGCAAGCCGAGTACCCGGAGCGCCCGATCCGCCTCATCATTC
CGTCCGCGGCCGGCGGCTCGCCCGACGTCGTGACGCGCATACTCGCGCTC
GAGCTGGTCAAGCAGATGGGCCAGCAGATCGTCATCGACAATCGCCCCGG
CGCCAGCTACACCATCGGCACCGACATGATCGTGCGCGCCAATCCCGACG
GCTATACGATCGGCTACGCCAACGTGGTGTCGCTCGCCATCAATAAATCG
CTGCTGCCCAAAGCGCAGCAGCCGTACGATCCAGACAAGGATCTCGTCGT
CGTCGGCCAGTTCCTGTCGACTTACAACATGCTCGCGGTGACCAACGCTC
TGCCGGTAAAGTCGGTCAAGGAATTGATCGATTATGCGCGGCAAAACCCG
GGCAAGTTGACGAATGCGTCGGGCGGCAACGGCACCACCGGCCATCTCGG
CGGCGAGCTCTTCAAGATCATGACCGGCACGCAGATCGTGCACGTGCCGT
ACAAAGGCAGCCCGCAGGGGATTTCGGACCTGATCGGCGGCCAGGTGCAA
CTGATGTTCGACAACCTGACTTCGATTTCGCCTCACGTGCGCTCGGGCAA
GGTGCGCGGCATCGGCGTCAGCAGCAGCAAGCGCTCGCCGATATTTCCCG
ATATTCCGACCATAGCGGAAGCCGGCGTGCCCGGTTACGAGACCAACGCG
TGGGGCGGGCTCGTGGTGCCCGTCGGCACGCCGAAGGCCGTCGTGACGAA
ACTCAACAGCGAAGTCAACAAAGCGTTGCAGGCGACCGCCCTGAAAGAGC
GCTACGCCGCGATCGAAGCCGAACCGGTCGGCGGCACGCCGGAAGCATTC
ACGGCGTTCGCCCGCAAGGAAACCGCGAAGTGGGCGGACGTCATCAAGAA
ATCCGGCGCCAAACTCGATTAA
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