mRNA_P-wetherbeei_contig51507.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig51507.1.1
Unique NamemRNA_P-wetherbeei_contig51507.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig51507.1.1 vs. uniprot
Match: A0A7Y2CL55_9BACT (Glyoxalase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y2CL55_9BACT)

HSP 1 Score: 74.7 bits (182), Expect = 1.140e-15
Identity = 31/43 (72.09%), Postives = 36/43 (83.72%), Query Frame = 1
Query:    1 HCVRARIAGAEMVLDIDDEGSDGRGYSCRDPEGHVWNFGTYDP 129
            HC RA  AGAE+V++I DE   GRGYSCRDPEGH+WNFG+YDP
Sbjct:   97 HCARAVAAGAEIVMEIKDEEYGGRGYSCRDPEGHLWNFGSYDP 139          
BLAST of mRNA_P-wetherbeei_contig51507.1.1 vs. uniprot
Match: A0A7C2LVE9_9HYPH (VOC domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2LVE9_9HYPH)

HSP 1 Score: 77.8 bits (190), Expect = 1.380e-15
Identity = 34/53 (64.15%), Postives = 41/53 (77.36%), Query Frame = 1
Query:    1 HCVRARIAGAEMVLDIDDEGSDGRGYSCRDPEGHVWNFGTYDPRQCRSVRPAP 159
            HC RAR AGAE+V D+ D  + GR Y+CRDPEGH+WNFGTY+P + RS  PAP
Sbjct:   97 HCSRARSAGAEIVFDVVDRVNGGRSYTCRDPEGHLWNFGTYNPWRPRSGAPAP 149          
BLAST of mRNA_P-wetherbeei_contig51507.1.1 vs. uniprot
Match: A0A7C2QXG0_9HYPH (VOC domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2QXG0_9HYPH)

HSP 1 Score: 78.2 bits (191), Expect = 1.420e-15
Identity = 34/48 (70.83%), Postives = 41/48 (85.42%), Query Frame = 1
Query:    1 HCVRARIAGAEMVLDIDDEGSDGRGYSCRDPEGHVWNFGTYDPRQCRS 144
            HC RAR AGAE++LDI+ +GS  RGYSCRDPEGH+WNFGTYDP + R+
Sbjct:   97 HCARARAAGAEILLDIEGDGS-ARGYSCRDPEGHIWNFGTYDPWRRRA 143          
BLAST of mRNA_P-wetherbeei_contig51507.1.1 vs. uniprot
Match: A0A6T8PPY0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8PPY0_HEMAN)

HSP 1 Score: 72.4 bits (176), Expect = 7.930e-15
Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 1
Query:    1 HCVRARIAGAEMVLDIDDEGSDGRGYSCRDPEGHVWNFGTYDP 129
            HC RA+ AGAE+V+D+ DE   GRG+SC+DPEGH+WN G+YDP
Sbjct:   93 HCARAKAAGAEIVIDVKDEDYGGRGFSCKDPEGHLWNCGSYDP 135          
BLAST of mRNA_P-wetherbeei_contig51507.1.1 vs. uniprot
Match: A0A534Z9D5_9DELT (Glyoxalase n=6 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534Z9D5_9DELT)

HSP 1 Score: 72.4 bits (176), Expect = 8.500e-15
Identity = 31/43 (72.09%), Postives = 35/43 (81.40%), Query Frame = 1
Query:    1 HCVRARIAGAEMVLDIDDEGSDGRGYSCRDPEGHVWNFGTYDP 129
            H  RA+ AGAE+V+DI DE   GRGYS RDPEGH+WNFGTYDP
Sbjct:   96 HYARAKAAGAEIVMDIKDEDYGGRGYSARDPEGHLWNFGTYDP 138          
BLAST of mRNA_P-wetherbeei_contig51507.1.1 vs. uniprot
Match: A0A6N6T2R8_9HYPH (VOC domain-containing protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6T2R8_9HYPH)

HSP 1 Score: 75.1 bits (183), Expect = 1.340e-14
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 1
Query:    1 HCVRARIAGAEMVLDIDDEGSDGRGYSCRDPEGHVWNFGTYDP 129
            HC RA+ AGA++V DI+DE   GR YSCRDPEGH+WNFGTY+P
Sbjct:  100 HCARAKAAGAQIVFDIEDEVKGGRSYSCRDPEGHLWNFGTYNP 142          
BLAST of mRNA_P-wetherbeei_contig51507.1.1 vs. uniprot
Match: W9H3D9_9PROT (Glyoxalase n=2 Tax=Skermanella TaxID=204447 RepID=W9H3D9_9PROT)

HSP 1 Score: 71.6 bits (174), Expect = 1.910e-14
Identity = 31/43 (72.09%), Postives = 35/43 (81.40%), Query Frame = 1
Query:    1 HCVRARIAGAEMVLDIDDEGSDGRGYSCRDPEGHVWNFGTYDP 129
            H  RAR AGAE+V+DI DE   GRGY+CRDPEGHVW+FG YDP
Sbjct:  100 HHARARAAGAEIVIDIKDEEYGGRGYTCRDPEGHVWSFGGYDP 142          
BLAST of mRNA_P-wetherbeei_contig51507.1.1 vs. uniprot
Match: A0A1E5X5Q9_9PSED (Glyoxalase n=7 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A1E5X5Q9_9PSED)

HSP 1 Score: 70.9 bits (172), Expect = 3.110e-14
Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 1
Query:   10 RARIAGAEMVLDIDDEGSDGRGYSCRDPEGHVWNFGTYDP 129
            RA  AGAE+V+DI DEG  GRG++CRDPEGHVW+FGTYDP
Sbjct:   94 RAVAAGAEIVIDIKDEGYGGRGFTCRDPEGHVWSFGTYDP 133          
BLAST of mRNA_P-wetherbeei_contig51507.1.1 vs. uniprot
Match: A0A2D7P112_9GAMM (Glyoxalase n=2 Tax=Cellvibrionales TaxID=1706369 RepID=A0A2D7P112_9GAMM)

HSP 1 Score: 69.7 bits (169), Expect = 1.030e-13
Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 1
Query:    1 HCVRARIAGAEMVLDIDDEGSDGRGYSCRDPEGHVWNFGTYDP 129
            HCV+AR  GAE+++D+ DE   GRGY+C+D EGHVW FGTYDP
Sbjct:   92 HCVQARQHGAEIIIDVRDEDYGGRGYTCKDLEGHVWTFGTYDP 134          
BLAST of mRNA_P-wetherbeei_contig51507.1.1 vs. uniprot
Match: UPI001F59E89E (VOC family protein n=1 Tax=Luteimonas aquatica TaxID=450364 RepID=UPI001F59E89E)

HSP 1 Score: 69.3 bits (168), Expect = 1.390e-13
Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 1
Query:    1 HCVRARIAGAEMVLDIDDEGSDGRGYSCRDPEGHVWNFGTYDP 129
            H  RA+ AGA++V+DI D+G  GRGY+CRDPEGH+W FG+YDP
Sbjct:   96 HYARAKAAGAQIVIDIADQGYGGRGYACRDPEGHLWWFGSYDP 138          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51507.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2CL55_9BACT1.140e-1572.09Glyoxalase n=1 Tax=Gemmatimonadetes bacterium TaxI... [more]
A0A7C2LVE9_9HYPH1.380e-1564.15VOC domain-containing protein n=1 Tax=Hyphomicrobi... [more]
A0A7C2QXG0_9HYPH1.420e-1570.83VOC domain-containing protein n=1 Tax=Hyphomicrobi... [more]
A0A6T8PPY0_HEMAN7.930e-1565.12Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A534Z9D5_9DELT8.500e-1572.09Glyoxalase n=6 Tax=Deltaproteobacteria bacterium T... [more]
A0A6N6T2R8_9HYPH1.340e-1469.77VOC domain-containing protein n=1 Tax=Hyphomicrobi... [more]
W9H3D9_9PROT1.910e-1472.09Glyoxalase n=2 Tax=Skermanella TaxID=204447 RepID=... [more]
A0A1E5X5Q9_9PSED3.110e-1475.00Glyoxalase n=7 Tax=Pseudomonadaceae TaxID=135621 R... [more]
A0A2D7P112_9GAMM1.030e-1365.12Glyoxalase n=2 Tax=Cellvibrionales TaxID=1706369 R... [more]
UPI001F59E89E1.390e-1365.12VOC family protein n=1 Tax=Luteimonas aquatica Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig51507contigP-wetherbeei_contig51507:3..173 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1349767.GJA_4408
PFAMsGlyoxalase
Model size171
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue8.94e-14
EggNOG OGsCOG2764@1|root,COG2764@2|Bacteria,1RIZB@1224|Proteobacteria,2WF7Z@28216|Betaproteobacteria,478YE@75682|Oxalobacteraceae
DescriptionGlyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Cds size171
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186773.9474087-CDS-P-wetherbeei_contig51507:2..1731683186773.9474087-CDS-P-wetherbeei_contig51507:2..173Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig51507 3..173 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig51507.1.1prot_P-wetherbeei_contig51507.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig51507 3..173 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig51507.1.1

>prot_P-wetherbeei_contig51507.1.1 ID=prot_P-wetherbeei_contig51507.1.1|Name=mRNA_P-wetherbeei_contig51507.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=57bp
HCVRARIAGAEMVLDIDDEGSDGRGYSCRDPEGHVWNFGTYDPRQCRSVR
PAPRATP
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mRNA from alignment at P-wetherbeei_contig51507:3..173+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig51507.1.1 ID=mRNA_P-wetherbeei_contig51507.1.1|Name=mRNA_P-wetherbeei_contig51507.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=171bp|location=Sequence derived from alignment at P-wetherbeei_contig51507:3..173+ (Phaeothamnion wetherbeei SAG_119_79)
CATTGCGTGCGGGCCAGGATCGCCGGTGCCGAGATGGTTCTCGACATCGA CGACGAGGGCAGCGACGGACGAGGCTATTCCTGTCGCGACCCCGAAGGGC ACGTCTGGAATTTCGGAACCTACGATCCGAGACAATGCCGTTCGGTACGG CCTGCGCCGCGGGCGACGCCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig51507:3..173+

>mRNA_P-wetherbeei_contig51507.1.1 ID=mRNA_P-wetherbeei_contig51507.1.1|Name=mRNA_P-wetherbeei_contig51507.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=171bp|location=Sequence derived from alignment at P-wetherbeei_contig51507:3..173+ (Phaeothamnion wetherbeei SAG_119_79)
CATTGCGTGCGGGCCAGGATCGCCGGTGCCGAGATGGTTCTCGACATCGA
CGACGAGGGCAGCGACGGACGAGGCTATTCCTGTCGCGACCCCGAAGGGC
ACGTCTGGAATTTCGGAACCTACGATCCGAGACAATGCCGTTCGGTACGG
CCTGCGCCGCGGGCGACGCCG
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