mRNA_P-wetherbeei_contig515.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig515.2.1
Unique NamemRNA_P-wetherbeei_contig515.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig515.2.1 vs. uniprot
Match: A0A3C1FN81_9PROT (Glutathione S-transferase n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C1FN81_9PROT)

HSP 1 Score: 270 bits (691), Expect = 1.440e-89
Identity = 135/202 (66.83%), Postives = 153/202 (75.74%), Query Frame = 1
Query:    1 MPEFILVIGNKNWSSWSLRPWLVMKHAGIAFDEAHVQLRQPGTRQQNLQHSPSGKVPVLKHNGLTIWDSLAIAEYLAGLFPQKQLWPADPAARARARSISAEMHSGFQALRTHLPMDILGRYPGKGLDGEGVAADIARVQEIWRDARAQWGAGGPFLFGKFSIADAMYAPVVTRFMTYDVACDGGCKTYMDAIWNMPAMLEW 606
            M E ILVIGNKNWSSWSLRPWL M+ + I F E +V+LRQPGTR   L+HSPSG VPVLK +G  IWDSLAI E L+  FP +QLWP    ARA ARSISAEMHSGFQ LR HLPMD LGRYPG+G D +GVAA+I RV  IWR+ RAQ  A GPFLFG F+IADAM+APVV+RF TY V  D  C+ YM AI  +PAM +W
Sbjct:    1 MSERILVIGNKNWSSWSLRPWLAMRVSNIPFREEYVELRQPGTRAACLRHSPSGLVPVLKQDGRAIWDSLAILETLSEQFPDRQLWPDAADARAHARSISAEMHSGFQPLRQHLPMDCLGRYPGRGCDADGVAANIDRVCAIWRECRAQAPAKGPFLFGHFTIADAMFAPVVSRFETYAVPVDTVCRDYMGAILALPAMADW 202          
BLAST of mRNA_P-wetherbeei_contig515.2.1 vs. uniprot
Match: UPI0015D51A5F (glutathione S-transferase family protein n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D51A5F)

HSP 1 Score: 258 bits (660), Expect = 1.010e-84
Identity = 121/202 (59.90%), Postives = 154/202 (76.24%), Query Frame = 1
Query:    1 MPEFILVIGNKNWSSWSLRPWLVMKHAGIAFDEAHVQLRQPGTRQQNLQHSPSGKVPVLKHNGLTIWDSLAIAEYLAGLFPQKQLWPADPAARARARSISAEMHSGFQALRTHLPMDILGRYPGKGLDGEGVAADIARVQEIWRDARAQWGAGGPFLFGKFSIADAMYAPVVTRFMTYDVACDGGCKTYMDAIWNMPAMLEW 606
            M +  L++G+K +SSWSLRPWL +K  G+ F E  + LRQP TR + L+HSP+GKVPVL+H  LT+WDSLAI EY+A L P+  LWPADPAARA AR++SAEMH+GFQALR+ +PMD+  R PG+G+  +  A DIAR+  +W D RA++G GGPFLFG+FSIADAMYAPVVTRF TY VA D   + Y DA+  +PAM +W
Sbjct:    1 MSDLTLILGSKAYSSWSLRPWLALKQTGLPFAELVIPLRQPDTRARILEHSPAGKVPVLRHGDLTVWDSLAICEYVAELAPEAALWPADPAARAIARAVSAEMHAGFQALRSSMPMDLKRRAPGEGMT-DATATDIARITALWADCRARFGEGGPFLFGRFSIADAMYAPVVTRFDTYAVALDSTARAYADAVLALPAMRDW 201          
BLAST of mRNA_P-wetherbeei_contig515.2.1 vs. uniprot
Match: UPI00115DFFD4 (glutathione S-transferase family protein n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115DFFD4)

HSP 1 Score: 256 bits (654), Expect = 5.510e-84
Identity = 124/202 (61.39%), Postives = 151/202 (74.75%), Query Frame = 1
Query:    1 MPEFILVIGNKNWSSWSLRPWLVMKHAGIAFDEAHVQLRQPGTRQQNLQHSPSGKVPVLKHNGLTIWDSLAIAEYLAGLFPQKQLWPADPAARARARSISAEMHSGFQALRTHLPMDILGRYPGKGLDGEGVAADIARVQEIWRDARAQWGAGGPFLFGKFSIADAMYAPVVTRFMTYDVACDGGCKTYMDAIWNMPAMLEW 606
            M EF+LV+G K +S+WSLRP++ ++HAG  F E  V LRQP T+ Q L HSPSGKVP+L HNGL +WDSLAI EY+A LFP+  LWPA+  ARA AR++SAEMH+GFQALR  +PMDI    P  G+  E V ADI RV  IWRD RA++G GGPFLFG+F+IADAMYAPVV+RF TY V  D     YM AIW++PAM +W
Sbjct:    1 MDEFVLVVGTKRYSTWSLRPYMALRHAGATFQEEEVTLRQPDTKAQILAHSPSGKVPLLIHNGLKVWDSLAICEYVAELFPEAGLWPAERDARAVARAVSAEMHAGFQALRQVMPMDISLHAPMSGIPPE-VQADIDRVTAIWRDCRARFGQGGPFLFGRFTIADAMYAPVVSRFTTYGVGVDDVSAAYMQAIWDLPAMRDW 201          
BLAST of mRNA_P-wetherbeei_contig515.2.1 vs. uniprot
Match: UPI001673B089 (glutathione S-transferase family protein n=1 Tax=Thalassobaculum fulvum TaxID=1633335 RepID=UPI001673B089)

HSP 1 Score: 253 bits (647), Expect = 8.930e-83
Identity = 122/202 (60.40%), Postives = 151/202 (74.75%), Query Frame = 1
Query:    1 MPEFILVIGNKNWSSWSLRPWLVMKHAGIAFDEAHVQLRQPGTRQQNLQHSPSGKVPVLKHNGLTIWDSLAIAEYLAGLFPQKQLWPADPAARARARSISAEMHSGFQALRTHLPMDILGRYPGKGLDGEGVAADIARVQEIWRDARAQWGAGGPFLFGKFSIADAMYAPVVTRFMTYDVACDGGCKTYMDAIWNMPAMLEW 606
            M EF LVIGNKN+SSWSLRPWL ++HAGIAFDE  + L +PGT+   L+HS SG+VP LKH  LT+WDSLAI EY+A L P+  LWP D AARA ARSISAEMH+GF ALRTH+PM+I  R+P +G    GV  DI R+  +WR  R++ G  GPFLFG+F+IADAM+APVV+RF TY VA     + Y DA+W++ +M EW
Sbjct:    1 MAEFTLVIGNKNYSSWSLRPWLALRHAGIAFDEVLIALDEPGTKAAILKHSASGRVPALKHGDLTVWDSLAICEYVAELRPEAGLWPDDSAARAVARSISAEMHTGFSALRTHMPMNIRSRFPEEGRK-PGVKEDIDRIAALWRQCRSRHGGDGPFLFGRFTIADAMFAPVVSRFRTYAVALGEVEQAYADAVWSLESMKEW 201          
BLAST of mRNA_P-wetherbeei_contig515.2.1 vs. uniprot
Match: A0A6I2GW42_9DELT (Glutathione S-transferase family protein n=1 Tax=Aggregicoccus sp. 17bor-14 TaxID=2583808 RepID=A0A6I2GW42_9DELT)

HSP 1 Score: 251 bits (640), Expect = 1.000e-81
Identity = 120/202 (59.41%), Postives = 145/202 (71.78%), Query Frame = 1
Query:    1 MPEFILVIGNKNWSSWSLRPWLVMKHAGIAFDEAHVQLRQPGTRQQNLQHSPSGKVPVLKHNGLTIWDSLAIAEYLAGLFPQKQLWPADPAARARARSISAEMHSGFQALRTHLPMDILGRYPGKGLDGEGVAADIARVQEIWRDARAQWGAGGPFLFGKFSIADAMYAPVVTRFMTYDVACDGGCKTYMDAIWNMPAMLEW 606
            M    LV+G+KN+SSWSLRP+L + H G  F+E  + L  P T     +HSPSGKVP L+H  LT+WDSLAI EY+A LFPQ  LWP D AARA ARS+SAEMHSGF ALR + PM+I  R PG GL   GVA DIAR+Q++WR+ R ++GAGGPFLFG FSIADAMYAPV+ RF+TY VA D     Y DA+  +P+M  W
Sbjct:    1 MAPLTLVVGSKNYSSWSLRPYLALAHTGQPFEEVVIALDAPDTAANIARHSPSGKVPALRHGELTVWDSLAICEYVAELFPQAGLWPKDAAARAVARSVSAEMHSGFLALRQNCPMNIRARKPGVGLQAPGVAQDIARIQQLWRECRTRYGAGGPFLFGAFSIADAMYAPVLHRFVTYGVALDAQLSAYRDAVLQLPSMQAW 202          
BLAST of mRNA_P-wetherbeei_contig515.2.1 vs. uniprot
Match: UPI00042A6294 (glutathione S-transferase family protein n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI00042A6294)

HSP 1 Score: 249 bits (637), Expect = 3.490e-81
Identity = 120/201 (59.70%), Postives = 146/201 (72.64%), Query Frame = 1
Query:    4 PEFILVIGNKNWSSWSLRPWLVMKHAGIAFDEAHVQLRQPGTRQQNLQHSPSGKVPVLKHNGLTIWDSLAIAEYLAGLFPQKQLWPADPAARARARSISAEMHSGFQALRTHLPMDILGRYPGKGLDGEGVAADIARVQEIWRDARAQWGAGGPFLFGKFSIADAMYAPVVTRFMTYDVACDGGCKTYMDAIWNMPAMLEW 606
            P+  LV+GNK +SSWSLRPWL +K  G+ F E  + LR+P T+   L+HSP+GKVPVL+H   T+WDSLAI EYLA  FP  +LWP D  ARA AR++SAEMHSGFQALR  LPMD+  R+PG+  D E V ADIAR++ +W D R ++GA GPFLFG+FS ADAMYAPVVTRF TY V  D   + Y DAI  +P M EW
Sbjct:    6 PDITLVLGNKAYSSWSLRPWLALKRTGVPFAEVVIPLRRPETKGAILEHSPAGKVPVLRHGDRTVWDSLAIIEYLAETFPSARLWPEDANARAVARAVSAEMHSGFQALRKALPMDLKARHPGRTFDAE-VEADIARIRSLWEDCRRRFGADGPFLFGRFSAADAMYAPVVTRFDTYAVTLDPVSRAYADAILTLPEMREW 205          
BLAST of mRNA_P-wetherbeei_contig515.2.1 vs. uniprot
Match: UPI0019D6B70C (glutathione S-transferase family protein n=1 Tax=Pyxidicoccus sp. SCPEA002 TaxID=2813578 RepID=UPI0019D6B70C)

HSP 1 Score: 248 bits (634), Expect = 9.030e-81
Identity = 118/197 (59.90%), Postives = 147/197 (74.62%), Query Frame = 1
Query:   16 LVIGNKNWSSWSLRPWLVMKHAGIAFDEAHVQLRQPGTRQQNLQHSPSGKVPVLKHNGLTIWDSLAIAEYLAGLFPQKQLWPADPAARARARSISAEMHSGFQALRTHLPMDILGRYPGKGLDGEGVAADIARVQEIWRDARAQWGAGGPFLFGKFSIADAMYAPVVTRFMTYDVACDGGCKTYMDAIWNMPAMLEW 606
            LV+G KN+SSWSLRP+L + H G  F E  +QL +P + ++ LQHSPS +VP+LKH  L+IWDSLAI EYLA  FP+  LWP D AARA ARS++AEMHSGF ALR H+ M+I  R PG+G    GVA DIAR+Q IW+D R+++G GGPFLFGKFSIADA YAPVVTRF+TY V  D  C  Y DA+  +P++ +W
Sbjct:   10 LVVGTKNYSSWSLRPYLALAHTGQPFQEVVIQLGEPDSTEKILQHSPSARVPLLKHGELSIWDSLAICEYLAETFPEAHLWPEDKAARAVARSVTAEMHSGFMALRNHMSMNIRARKPGQGR-APGVAEDIARIQAIWKDCRSRFGQGGPFLFGKFSIADAFYAPVVTRFVTYGVELDAVCAAYRDAVLALPSLQKW 205          
BLAST of mRNA_P-wetherbeei_contig515.2.1 vs. uniprot
Match: A0A2U9S5E0_9PROT (Glutathione S-transferase n=1 Tax=Azospirillum ramasamyi TaxID=682998 RepID=A0A2U9S5E0_9PROT)

HSP 1 Score: 247 bits (631), Expect = 2.340e-80
Identity = 123/204 (60.29%), Postives = 153/204 (75.00%), Query Frame = 1
Query:    1 MPEFILVIGNKNWSSWSLRPWLVMKHAGIAFDEAHVQLRQPGTRQQNLQHSPSGKVPVLKHNGLTIWDSLAIAEYLAGLFPQKQLWPADPAARARARSISAEMHSGFQALRTHLPMDILGRYPGKGLDGEGVAADIARVQEIWRDARAQWG--AGGPFLFGKFSIADAMYAPVVTRFMTYDVACDGGCKTYMDAIWNMPAMLEW 606
            M +  LV+G+K +SSWSLRPWL MK AG+AF E  + LRQP T  +   HSPSG+VP L H+GLT+WDSLAI EY+A L P+  LWPAD AARA ARS+SAEMHSGF +LR+ +PM++     G+G+  E  AADIAR+Q +W DARA++G  AGGPFLFG F+IADAM+APVVTRF TY VA +   + YMDA+  +PAM EW
Sbjct:    1 MSDLTLVVGSKAYSSWSLRPWLAMKQAGLAFAETVIPLRQPDTAARIAGHSPSGRVPTLIHDGLTVWDSLAICEYVAELAPEAGLWPADRAARAVARSVSAEMHSGFASLRSTMPMNLKRDRKGEGMT-EATAADIARIQALWADARARFGIPAGGPFLFGAFTIADAMFAPVVTRFQTYGVAVEAETRAYMDAVLALPAMEEW 203          
BLAST of mRNA_P-wetherbeei_contig515.2.1 vs. uniprot
Match: B6IPL4_RHOCS (Glutathione S-transferase, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) TaxID=414684 RepID=B6IPL4_RHOCS)

HSP 1 Score: 247 bits (631), Expect = 2.410e-80
Identity = 121/202 (59.90%), Postives = 149/202 (73.76%), Query Frame = 1
Query:    1 MPEFILVIGNKNWSSWSLRPWLVMKHAGIAFDEAHVQLRQPGTRQQNLQHSPSGKVPVLKHNGLTIWDSLAIAEYLAGLFPQKQLWPADPAARARARSISAEMHSGFQALRTHLPMDILGRYPGKGLDGEGVAADIARVQEIWRDARAQWGAGGPFLFGKFSIADAMYAPVVTRFMTYDVACDGGCKTYMDAIWNMPAMLEW 606
            M +F LVIGNK +SSWSLRPWL ++H G +F+E  + LR  GT+   L H+P+GKVPVLKH  LT+WDSLAI EYLA LFP   LWP DPAARA ARS+SAEMHSGF  LR +L MD+  R     +     A DIARV  +W D RA++GAGGPFLFG+FSIAD MYAPV TRF+T++VA D G + Y++AI+ +PAM +W
Sbjct:    1 MDKFTLVIGNKAYSSWSLRPWLALRHVGASFEEEVIPLRTEGTKAAILAHNPAGKVPVLKHGALTVWDSLAICEYLAELFPAAGLWPEDPAARAVARSVSAEMHSGFLDLRRNLFMDLKQRRHDP-VRRSAAADDIARVTALWSDCRARFGAGGPFLFGRFSIADCMYAPVCTRFVTWNVAMDAGARAYVEAIYALPAMRDW 201          
BLAST of mRNA_P-wetherbeei_contig515.2.1 vs. uniprot
Match: Q1DDY8_MYXXD (Glutathione S-transferase domain protein n=15 Tax=Myxococcaceae TaxID=31 RepID=Q1DDY8_MYXXD)

HSP 1 Score: 247 bits (630), Expect = 3.210e-80
Identity = 120/202 (59.41%), Postives = 147/202 (72.77%), Query Frame = 1
Query:    1 MPEFILVIGNKNWSSWSLRPWLVMKHAGIAFDEAHVQLRQPGTRQQNLQHSPSGKVPVLKHNGLTIWDSLAIAEYLAGLFPQKQLWPADPAARARARSISAEMHSGFQALRTHLPMDILGRYPGKGLDGEGVAADIARVQEIWRDARAQWGAGGPFLFGKFSIADAMYAPVVTRFMTYDVACDGGCKTYMDAIWNMPAMLEW 606
            MP+  LV+G+KN+SSWSLRP+L + H G  F E  + L  P T  +  ++SPS +VPVL+H  LTIWDSLAI EYLA  FPQ QLWP D AARA AR+++AEMHSGF ALR H+ M++  R PGKG    GVA DIARVQ +W D R ++G GGPFLFG+FSIADA YAPVVTRF+TYDVA D     Y DA+  +PA+ +W
Sbjct:    1 MPQLTLVVGSKNYSSWSLRPYLALAHTGQPFQEVVIPLAVPDTEDRIARYSPSKRVPVLQHGDLTIWDSLAICEYLAEAFPQAQLWPQDMAARAVARAVTAEMHSGFGALRQHMNMNLRARSPGKGR-APGVAEDIARVQALWNDCRGRFGQGGPFLFGRFSIADAFYAPVVTRFVTYDVALDAVSAAYRDAVLALPALQKW 201          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig515.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C1FN81_9PROT1.440e-8966.83Glutathione S-transferase n=6 Tax=Alphaproteobacte... [more]
UPI0015D51A5F1.010e-8459.90glutathione S-transferase family protein n=1 Tax=A... [more]
UPI00115DFFD45.510e-8461.39glutathione S-transferase family protein n=1 Tax=T... [more]
UPI001673B0898.930e-8360.40glutathione S-transferase family protein n=1 Tax=T... [more]
A0A6I2GW42_9DELT1.000e-8159.41Glutathione S-transferase family protein n=1 Tax=A... [more]
UPI00042A62943.490e-8159.70glutathione S-transferase family protein n=1 Tax=A... [more]
UPI0019D6B70C9.030e-8159.90glutathione S-transferase family protein n=1 Tax=P... [more]
A0A2U9S5E0_9PROT2.340e-8060.29Glutathione S-transferase n=1 Tax=Azospirillum ram... [more]
B6IPL4_RHOCS2.410e-8059.90Glutathione S-transferase, putative n=1 Tax=Rhodos... [more]
Q1DDY8_MYXXD3.210e-8059.41Glutathione S-transferase domain protein n=15 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig515contigP-wetherbeei_contig515:833..1438 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1121033.AUCF01000008_gene5688
PFAMsGST_C_2,GST_N_2,GST_N_3
Model size606
Max annot lvl204441|Rhodospirillales
KEGG rclassRC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K00799
KEGG TC1.A.12.2.2,1.A.12.3.2
KEGG ReactionR03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905
KEGG Pathwayko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.72e-82
EggNOG OGsCOG0625@1|root,COG0625@2|Bacteria,1PHM1@1224|Proteobacteria,2TTQZ@28211|Alphaproteobacteria,2JRW7@204441|Rhodospirillales
EC2.5.1.18
DescriptionGlutathione S-transferase
Cds size606
COG categoryO
BRITEko00000,ko00001,ko01000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186773.5107458-CDS-P-wetherbeei_contig515:832..14381683186773.5107458-CDS-P-wetherbeei_contig515:832..1438Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig515 833..1438 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig515.2.1prot_P-wetherbeei_contig515.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig515 833..1438 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig515.2.1

>prot_P-wetherbeei_contig515.2.1 ID=prot_P-wetherbeei_contig515.2.1|Name=mRNA_P-wetherbeei_contig515.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=202bp
MPEFILVIGNKNWSSWSLRPWLVMKHAGIAFDEAHVQLRQPGTRQQNLQH
SPSGKVPVLKHNGLTIWDSLAIAEYLAGLFPQKQLWPADPAARARARSIS
AEMHSGFQALRTHLPMDILGRYPGKGLDGEGVAADIARVQEIWRDARAQW
GAGGPFLFGKFSIADAMYAPVVTRFMTYDVACDGGCKTYMDAIWNMPAML
EW
back to top

mRNA from alignment at P-wetherbeei_contig515:833..1438+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig515.2.1 ID=mRNA_P-wetherbeei_contig515.2.1|Name=mRNA_P-wetherbeei_contig515.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=606bp|location=Sequence derived from alignment at P-wetherbeei_contig515:833..1438+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGGAATTCATACTGGTTATCGGAAACAAAAACTGGTCGTCCTGGTC GTTAAGGCCCTGGCTGGTGATGAAACATGCGGGCATTGCGTTTGACGAAG CGCATGTTCAGTTGCGCCAGCCCGGCACGCGCCAGCAGAATTTACAGCAT TCACCGTCCGGCAAGGTTCCCGTGCTGAAGCATAATGGGCTGACAATCTG GGACAGTCTGGCGATTGCCGAATATCTGGCCGGGCTGTTTCCACAAAAAC AATTATGGCCAGCCGATCCCGCCGCGCGGGCGCGGGCGCGCAGCATTAGC GCCGAAATGCATTCGGGCTTTCAGGCGCTGCGCACCCATCTGCCGATGGA CATTCTGGGCCGCTATCCGGGTAAGGGCCTGGATGGGGAAGGCGTTGCTG CGGACATTGCGCGCGTTCAGGAAATCTGGCGCGATGCCCGCGCGCAATGG GGTGCGGGCGGGCCGTTCCTGTTTGGTAAATTTAGCATTGCGGACGCGAT GTATGCGCCGGTGGTGACACGGTTCATGACCTATGATGTTGCCTGTGACG GCGGATGCAAAACCTATATGGACGCCATCTGGAATATGCCCGCCATGCTG GAATGG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig515:833..1438+

>mRNA_P-wetherbeei_contig515.2.1 ID=mRNA_P-wetherbeei_contig515.2.1|Name=mRNA_P-wetherbeei_contig515.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=606bp|location=Sequence derived from alignment at P-wetherbeei_contig515:833..1438+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGGAATTCATACTGGTTATCGGAAACAAAAACTGGTCGTCCTGGTC
GTTAAGGCCCTGGCTGGTGATGAAACATGCGGGCATTGCGTTTGACGAAG
CGCATGTTCAGTTGCGCCAGCCCGGCACGCGCCAGCAGAATTTACAGCAT
TCACCGTCCGGCAAGGTTCCCGTGCTGAAGCATAATGGGCTGACAATCTG
GGACAGTCTGGCGATTGCCGAATATCTGGCCGGGCTGTTTCCACAAAAAC
AATTATGGCCAGCCGATCCCGCCGCGCGGGCGCGGGCGCGCAGCATTAGC
GCCGAAATGCATTCGGGCTTTCAGGCGCTGCGCACCCATCTGCCGATGGA
CATTCTGGGCCGCTATCCGGGTAAGGGCCTGGATGGGGAAGGCGTTGCTG
CGGACATTGCGCGCGTTCAGGAAATCTGGCGCGATGCCCGCGCGCAATGG
GGTGCGGGCGGGCCGTTCCTGTTTGGTAAATTTAGCATTGCGGACGCGAT
GTATGCGCCGGTGGTGACACGGTTCATGACCTATGATGTTGCCTGTGACG
GCGGATGCAAAACCTATATGGACGCCATCTGGAATATGCCCGCCATGCTG
GAATGG
back to top