mRNA_P-wetherbeei_contig51479.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig51479.1.1 vs. uniprot
Match: A0A3C0Y501_9BURK (Uncharacterized protein n=1 Tax=Polaromonas sp. TaxID=1869339 RepID=A0A3C0Y501_9BURK) HSP 1 Score: 244 bits (624), Expect = 4.830e-81 Identity = 123/136 (90.44%), Postives = 128/136 (94.12%), Query Frame = 1
Query: 1 HLLDTDRRLFGNLFTLEDAQKIEADPILAERLDAFVSRFGRLQDTVGDKLLPALLSALAETPGPAIDNLDKAEKFGFIESADGWMEMRRLRNQMVREYIEDLAVLCSALRNGHAFVPILVAAARRCVAEGDRILHA 408
HLLDTDRRLF NLFT+E+AQK+EADPILAERLDAFVSRFGRLQDTVGDKLLPALLSALAETPGPAIDNLDKAEKF FIESADGWMEMRRLRNQMV EYIEDLAVL SALRNGHAFVP LVAAARRCV E +R+L A
Sbjct: 24 HLLDTDRRLFANLFTIEEAQKVEADPILAERLDAFVSRFGRLQDTVGDKLLPALLSALAETPGPAIDNLDKAEKFRFIESADGWMEMRRLRNQMVHEYIEDLAVLSSALRNGHAFVPTLVAAARRCVVEVERLLSA 159
BLAST of mRNA_P-wetherbeei_contig51479.1.1 vs. uniprot
Match: UPI0019B826FF (Uncharacterized protein n=1 Tax=Polaromonas sp. TaxID=1869339 RepID=UPI0019B826FF) HSP 1 Score: 240 bits (613), Expect = 1.640e-79 Identity = 121/134 (90.30%), Postives = 126/134 (94.03%), Query Frame = 1
Query: 1 HLLDTDRRLFGNLFTLEDAQKIEADPILAERLDAFVSRFGRLQDTVGDKLLPALLSALAETPGPAIDNLDKAEKFGFIESADGWMEMRRLRNQMVREYIEDLAVLCSALRNGHAFVPILVAAARRCVAEGDRIL 402
HLLDTD RLFG+LFT+E+AQKIEADPILAERLDAFVSRFGRLQDTVGDKLLPALL+ALAE PGPAIDNLDKAEKFGFI SADGWMEMRRLRNQMV EYIEDLAVL SALRNGHAFVP LVAAARRCVAE R+L
Sbjct: 24 HLLDTDGRLFGSLFTIEEAQKIEADPILAERLDAFVSRFGRLQDTVGDKLLPALLTALAEKPGPAIDNLDKAEKFGFIASADGWMEMRRLRNQMVHEYIEDLAVLASALRNGHAFVPALVAAARRCVAEARRLL 157
BLAST of mRNA_P-wetherbeei_contig51479.1.1 vs. uniprot
Match: A0A1F4KAS3_9BURK (Uncharacterized protein n=1 Tax=Burkholderiales bacterium RIFCSPLOWO2_12_FULL_61_40 TaxID=1797566 RepID=A0A1F4KAS3_9BURK) HSP 1 Score: 219 bits (557), Expect = 5.400e-71 Identity = 109/136 (80.15%), Postives = 121/136 (88.97%), Query Frame = 1
Query: 1 HLLDTDRRLFGNLFTLEDAQKIEADPILAERLDAFVSRFGRLQDTVGDKLLPALLSALAETPGPAIDNLDKAEKFGFIESADGWMEMRRLRNQMVREYIEDLAVLCSALRNGHAFVPILVAAARRCVAEGDRILHA 408
HLLDTD+RLFG+LFT+EDAQKI +DPILAERLDAFVSRFGRLQDTVGDKLLPALL+ALAE GPAIDNLDKAEKFGF+ES D WMEMR+LRNQMV EYIEDLAVL SAL +GH VP+L+A+AR+C E RIL A
Sbjct: 24 HLLDTDQRLFGDLFTIEDAQKIASDPILAERLDAFVSRFGRLQDTVGDKLLPALLTALAEKTGPAIDNLDKAEKFGFLESVDTWMEMRKLRNQMVHEYIEDLAVLTSALCSGHNLVPMLIASARKCTTEARRILAA 159
BLAST of mRNA_P-wetherbeei_contig51479.1.1 vs. uniprot
Match: A0A315BX06_9BURK (Uncharacterized protein n=2 Tax=unclassified Limnohabitans TaxID=2626134 RepID=A0A315BX06_9BURK) HSP 1 Score: 215 bits (548), Expect = 1.400e-69 Identity = 110/136 (80.88%), Postives = 120/136 (88.24%), Query Frame = 1
Query: 1 HLLDTDRRLFGNLFTLEDAQKIEADPILAERLDAFVSRFGRLQDTVGDKLLPALLSALAETPGPAIDNLDKAEKFGFIESADGWMEMRRLRNQMVREYIEDLAVLCSALRNGHAFVPILVAAARRCVAEGDRILHA 408
HLL+TD RLFGNLFT+EDAQ+IEADP+LAERLDAFVSRF RLQDTVGDKLLPALL+ LAE G AIDNLDKAEK G I SAD W+EMR+LRNQMV EYIEDLAVL SALR GHAFVP+LVAAARRCVAE + L+A
Sbjct: 24 HLLETDGRLFGNLFTIEDAQRIEADPVLAERLDAFVSRFARLQDTVGDKLLPALLTLLAEKTGAAIDNLDKAEKLGLIVSADVWVEMRQLRNQMVHEYIEDLAVLTSALRAGHAFVPVLVAAARRCVAETQQRLNA 159
BLAST of mRNA_P-wetherbeei_contig51479.1.1 vs. uniprot
Match: UPI001F0B70A6 (hypothetical protein n=1 Tax=Rhodoferax sp. PAMC 29310 TaxID=2822760 RepID=UPI001F0B70A6) HSP 1 Score: 212 bits (540), Expect = 8.080e-69 Identity = 105/128 (82.03%), Postives = 117/128 (91.41%), Query Frame = 1
Query: 25 LFGNLFTLEDAQKIEADPILAERLDAFVSRFGRLQDTVGDKLLPALLSALAETPGPAIDNLDKAEKFGFIESADGWMEMRRLRNQMVREYIEDLAVLCSALRNGHAFVPILVAAARRCVAEGDRILHA 408
+F LFT+E+A+K+E DP+L+ERLDAFVSRFGRLQDTVG+KLLPALLSALAET GPAIDNLDKAEKF FIES+DGW+EMRRLRNQMV EYIEDL VL SALRNGHAFVP LVAAARRCVAE +R+L A
Sbjct: 1 MFAKLFTIEEAKKVETDPLLSERLDAFVSRFGRLQDTVGEKLLPALLSALAETLGPAIDNLDKAEKFRFIESSDGWLEMRRLRNQMVHEYIEDLVVLASALRNGHAFVPTLVAAARRCVAEVERLLGA 128
BLAST of mRNA_P-wetherbeei_contig51479.1.1 vs. uniprot
Match: A0A4P5U142_9BURK (Uncharacterized protein n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4P5U142_9BURK) HSP 1 Score: 212 bits (540), Expect = 2.100e-68 Identity = 108/136 (79.41%), Postives = 118/136 (86.76%), Query Frame = 1
Query: 1 HLLDTDRRLFGNLFTLEDAQKIEADPILAERLDAFVSRFGRLQDTVGDKLLPALLSALAETPGPAIDNLDKAEKFGFIESADGWMEMRRLRNQMVREYIEDLAVLCSALRNGHAFVPILVAAARRCVAEGDRILHA 408
HLL TD RLFG+LFT++ A+KI++DP+LAERLDAFVSRFGRLQDTVGDKLLPALLSALAE GPAIDNLDKAEK G +ESAD WMEMRRLRNQMV EYIEDLAVL SALR GH FVP+LV AR CVAE R+L A
Sbjct: 24 HLLYTDSRLFGDLFTVQTAEKIQSDPVLAERLDAFVSRFGRLQDTVGDKLLPALLSALAEPVGPAIDNLDKAEKLGLLESADLWMEMRRLRNQMVHEYIEDLAVLTSALRTGHDFVPMLVQTARHCVAETRRLLSA 159
BLAST of mRNA_P-wetherbeei_contig51479.1.1 vs. uniprot
Match: A0A2M6V6A2_9BURK (Uncharacterized protein n=1 Tax=Limnohabitans sp. G3-2 TaxID=1100711 RepID=A0A2M6V6A2_9BURK) HSP 1 Score: 186 bits (471), Expect = 6.690e-58 Identity = 91/135 (67.41%), Postives = 111/135 (82.22%), Query Frame = 1
Query: 1 HLLDTDRRLFGNLFTLEDAQKIEADPILAERLDAFVSRFGRLQDTVGDKLLPALLSALAETPGPAIDNLDKAEKFGFIESADGWMEMRRLRNQMVREYIEDLAVLCSALRNGHAFVPILVAAARRCVAEGDRILH 405
HLLDTDRRLF +LFT++ AQKI+ DPILAERLDAFVSRFGRLQD +GDK LP LL ALAE PG AIDNLD+AE+ +IESA+ W+E+R+LRNQMV EYIEDLA+L SAL+ GH V LVAA ++ + E R+++
Sbjct: 24 HLLDTDRRLFADLFTIDAAQKIDTDPILAERLDAFVSRFGRLQDNLGDKFLPQLLLALAEKPGAAIDNLDRAERLDWIESAETWLEIRKLRNQMVHEYIEDLAILASALQAGHQHVATLVAAGQKMMIEAQRLIN 158
BLAST of mRNA_P-wetherbeei_contig51479.1.1 vs. uniprot
Match: UPI00041F86AC (hypothetical protein n=1 Tax=Thermithiobacillus tepidarius TaxID=929 RepID=UPI00041F86AC) HSP 1 Score: 176 bits (446), Expect = 4.970e-54 Identity = 86/132 (65.15%), Postives = 104/132 (78.79%), Query Frame = 1
Query: 1 HLLDTDRRLFGNLFTLEDAQKIEADPILAERLDAFVSRFGRLQDTVGDKLLPALLSALAETPGPAIDNLDKAEKFGFIESADGWMEMRRLRNQMVREYIEDLAVLCSALRNGHAFVPILVAAARRCVAEGDR 396
HL TD+RLF FTLE A+++EA P LAER+DAFVSRF RLQDT+GDKLLP LL+AL ETPG AIDNLD+AE+ G I SAD WM +R+LRNQMV EY+EDL+VL SAL+ GH F P++ AAA + E +R
Sbjct: 24 HLASTDQRLFSEPFTLERARQLEAKPDLAERVDAFVSRFARLQDTLGDKLLPVLLTALGETPGAAIDNLDRAERLGLIASADEWMTLRKLRNQMVHEYVEDLSVLTSALQTGHEFTPMITAAANNMILEVER 155
BLAST of mRNA_P-wetherbeei_contig51479.1.1 vs. uniprot
Match: A0A315E3R3_9BURK (Uncharacterized protein n=2 Tax=Limnohabitans TaxID=665874 RepID=A0A315E3R3_9BURK) HSP 1 Score: 175 bits (443), Expect = 1.180e-53 Identity = 84/133 (63.16%), Postives = 107/133 (80.45%), Query Frame = 1
Query: 1 HLLDTDRRLFGNLFTLEDAQKIEADPILAERLDAFVSRFGRLQDTVGDKLLPALLSALAETPGPAIDNLDKAEKFGFIESADGWMEMRRLRNQMVREYIEDLAVLCSALRNGHAFVPILVAAARRCVAEGDRI 399
+L +TD RLF + TLE QK+E DP+LAERLDAFV RFGRLQD +GDKLLP LL A+AE G I+NLD+AEK G+IESAD W+E+R+LRNQMV EYIED+ +L SAL+ GHAFVP+L+A A+R A+ +++
Sbjct: 24 YLQETDSRLFADPMTLESLQKMEIDPVLAERLDAFVGRFGRLQDNLGDKLLPQLLDAMAEKTGAVIENLDRAEKLGWIESADVWLEVRKLRNQMVHEYIEDMNILISALKAGHAFVPVLIATAQRFAAQIEKL 156
BLAST of mRNA_P-wetherbeei_contig51479.1.1 vs. uniprot
Match: A0A315AN34_9BURK (Uncharacterized protein n=2 Tax=Limnohabitans sp. T6-5 TaxID=1100724 RepID=A0A315AN34_9BURK) HSP 1 Score: 174 bits (442), Expect = 1.670e-53 Identity = 84/133 (63.16%), Postives = 106/133 (79.70%), Query Frame = 1
Query: 1 HLLDTDRRLFGNLFTLEDAQKIEADPILAERLDAFVSRFGRLQDTVGDKLLPALLSALAETPGPAIDNLDKAEKFGFIESADGWMEMRRLRNQMVREYIEDLAVLCSALRNGHAFVPILVAAARRCVAEGDRI 399
+L +TD+RLF TLE QKIE DP+LAERLDAFV RFGRLQD +GDKLLP LL A+AET G AI+NLD+AEK G+I+SAD W+EMR+LRNQMV EYIED+ +L SAL+ GH VP+L+ AA+R + +++
Sbjct: 24 YLQETDQRLFAEPMTLESLQKIETDPLLAERLDAFVGRFGRLQDNLGDKLLPQLLDAMAETTGAAIENLDRAEKLGWIDSADTWLEMRKLRNQMVHEYIEDINILISALKAGHTLVPVLIDAAKRLTDQINKL 156 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51479.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig51479.1.1 >prot_P-wetherbeei_contig51479.1.1 ID=prot_P-wetherbeei_contig51479.1.1|Name=mRNA_P-wetherbeei_contig51479.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=139bp HLLDTDRRLFGNLFTLEDAQKIEADPILAERLDAFVSRFGRLQDTVGDKLback to top mRNA from alignment at P-wetherbeei_contig51479:1..417+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig51479.1.1 ID=mRNA_P-wetherbeei_contig51479.1.1|Name=mRNA_P-wetherbeei_contig51479.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=417bp|location=Sequence derived from alignment at P-wetherbeei_contig51479:1..417+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig51479:1..417+ >mRNA_P-wetherbeei_contig51479.1.1 ID=mRNA_P-wetherbeei_contig51479.1.1|Name=mRNA_P-wetherbeei_contig51479.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=417bp|location=Sequence derived from alignment at P-wetherbeei_contig51479:1..417+ (Phaeothamnion wetherbeei SAG_119_79)back to top |