mRNA_P-wetherbeei_contig51412.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig51412.1.1
Unique NamemRNA_P-wetherbeei_contig51412.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig51412.1.1 vs. uniprot
Match: UPI001883BA01 (C45 family autoproteolytic acyltransferase/hydolase n=1 Tax=Kordiimonas pumila TaxID=2161677 RepID=UPI001883BA01)

HSP 1 Score: 171 bits (432), Expect = 6.230e-49
Identity = 83/170 (48.82%), Postives = 113/170 (66.47%), Query Frame = 1
Query:    1 RRRILMSQTLAEASDVILNTPRSASHNLMLSQIDGSGRAAAINFETTPEQLFWSFPTDGLLTHANHFKHPVALLSVKDIGLLRHPESLLRDSRAYERLDAGRASITVDTLKQVFADDFGEPHSICRPPAVRPDGSLSATVASLIMNAGSGDIWIAPSPFDGVPSYTRYKV 510
            RR++      + A  ++LN+ RS SHN+++S  +G     AI  ETTP+  FW  P  G+L+HANHFKHP ALLSV+D+ L RHPESL RD RA  +L+A    IT +T K + AD F  P++ICR PA R DG+ S TVA+LIM+  +G +W+AP+P+DG   YT Y +
Sbjct:  197 RRKMFTQDNYSAAIGILLNSKRSFSHNIIISHREGE----AICLETTPKSAFWIEPQKGILSHANHFKHPTALLSVEDLSLARHPESLHRDGRARRQLEAANGKITAETFKTILADKFDSPNAICRTPAYRADGAYSCTVANLIMDTTAGKMWLAPAPYDGAV-YTEYSL 361          
BLAST of mRNA_P-wetherbeei_contig51412.1.1 vs. uniprot
Match: A0A7W1G8L3_9BACT (Peptidase C45 n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=A0A7W1G8L3_9BACT)

HSP 1 Score: 160 bits (406), Expect = 5.370e-45
Identity = 80/170 (47.06%), Postives = 115/170 (67.65%), Query Frame = 1
Query:    1 RRRILMSQTLAEASDVILNTPRSASHNLMLSQIDGSGRAAAINFETTPEQLFWSFPTDGLLTHANHFKHPVALLSVKDIGLLRHPESLLRDSRAYERLDAGRASITVDTLKQVFADDFGEPHSICRPPAVRPDGSLSATVASLIMNAGSGDIWIAPSPFDGVPSYTRYKV 510
            RR++L  + L EA  V+ N+ RS SH L+LS  DG     A +FETTP++++W  P DG+L HANHFK  VA+  +KD+ L R P+SL RDSR    L A   SI+++T +QVF+D+FG+P+S+ R PA RP G +SAT+A+LIM+     +W+AP+PF     +T Y++
Sbjct:  202 RRKMLGCRNLGEAMSVLTNSARSFSHCLILSHADGE----AFSFETTPDEVYWLEPEDGILVHANHFKSTVAMAQLKDLNLGRSPDSLYRDSRVRRALKAAEGSISMETFRQVFSDEFGKPNSVLRHPAPRPGGMISATLATLIMDTTERIMWLAPTPFKNA-HFTEYRL 366          
BLAST of mRNA_P-wetherbeei_contig51412.1.1 vs. uniprot
Match: UPI001B1ED024 (Acyl-CoA--6-aminopenicillanic acid acyl-transferase n=1 Tax=Rhodospirillales bacterium TMPK1 TaxID=2812848 RepID=UPI001B1ED024)

HSP 1 Score: 150 bits (378), Expect = 8.210e-41
Identity = 83/168 (49.40%), Postives = 105/168 (62.50%), Query Frame = 1
Query:    1 RRRILMSQTLAEASDVILNTPRSASHNLMLSQIDGSGRAAAINFETTPEQLFWSFPTDGLLTHANHFKHPVALLSVKDIGLLRHPESLLRDSRAYERLDAGRASITVDTLKQVFADDFGEPHSICRPPAVRPDGSLSATVASLIMNAGSGDIWIAPSPFDGVPSYTRY 504
            RRR+L ++ LA A + ++N   + SH+L+L    GS    AIN E TPEQ +W  P  GLL HANHFK P+A   + DIGL R PESL RD R  E L A   +I +D LK  FAD FG P +I R P  RP G+LS TVA+LIM+  +  +WIAPSP+ G   +T Y
Sbjct:  204 RRRLLGAKNLAGAINAVVNADITFSHSLILGHPGGS----AINLEVTPEQSYWLQPERGLLVHANHFKCPIARARLHDIGLRRCPESLYRDQRLLEHLQAHHGAIDIDVLKAGFADTFGSPDAILRTPKQRPGGNLSGTVATLIMDLTARRMWIAPSPYLGA-RFTEY 366          
BLAST of mRNA_P-wetherbeei_contig51412.1.1 vs. uniprot
Match: A0A2E7IQQ2_9GAMM (Uncharacterized protein n=1 Tax=Spongiibacteraceae bacterium TaxID=2026793 RepID=A0A2E7IQQ2_9GAMM)

HSP 1 Score: 144 bits (364), Expect = 8.900e-39
Identity = 78/170 (45.88%), Postives = 105/170 (61.76%), Query Frame = 1
Query:    1 RRRILMSQTLAEASDVILNTPRSASHNLMLSQIDGSGRAAAINFETTPEQLFWSFPTDGLLTHANHFKHPVALLSVKDIGLLRHPESLLRDSRAYERLDAGRASITVDTLKQVFADDFGEPHSICRPPAVRPDGSLSATVASLIMNAGSGDIWIAPSPFDGVPSYTRYKV 510
            RRRIL ++TLAEA D +LN   + SH L +S  DG     A   ETTP+  FW     G++ HANHFK   AL    DIGL R PESL RD+RA   +   +  + +DT+K   AD++G P ++ R P +R  G++SATVAS IM+A SG +W+AP P+ G+  YT Y +
Sbjct:  205 RRRILQARTLAEALDTVLNADITYSHALTISHSDGE----AFCIETTPQSRFWLEAESGIMVHANHFKSSAALAKHNDIGLQRCPESLYRDARARRHM---QGLVDLDTIKSALADNWGSPDAVLRSPKLREGGTVSATVASEIMDAASGKMWLAPRPYLGI-EYTEYSL 366          
BLAST of mRNA_P-wetherbeei_contig51412.1.1 vs. uniprot
Match: UPI001EF591AD (C45 family peptidase n=1 Tax=Microvirga sp. ACRRW TaxID=2918205 RepID=UPI001EF591AD)

HSP 1 Score: 142 bits (358), Expect = 6.990e-38
Identity = 78/160 (48.75%), Postives = 98/160 (61.25%), Query Frame = 1
Query:    1 RRRILMSQTLAEASDVILNTPRSASHNLMLSQIDGSGRAAAINFETTPEQLFWSFPTDGLLTHANHFKHPVALLSVKDIGLLRHPESLLRDSRAYERLDAGRASITVDTLKQVFADDFGEPHSICRPPAVRPDGSLSATVASLIMNAGSGDIWIAPSPFD 480
            RR++L SQTLAEA   +L    S SH L+LS   GSG A  +  ETTP+  FW  P DG+L H NHFK P AL+ V++  L+R P+SL RD R    L A    ITVD +K  FADD+G P+ + R PA RP G  SATV +LIM    G  W+A  P++
Sbjct:  200 RRKVLESQTLAEAIGRVLQGGTSFSHALILSH--GSGEALCL--ETTPDDAFWIEPEDGILVHTNHFKAPAALVKVREANLVRCPDSLTRDMRLRGSLHAACGRITVDDVKAAFADDWGHPYGVLRHPAPRPGGLTSATVYTLIMTPQKGKAWVALKPYE 355          
BLAST of mRNA_P-wetherbeei_contig51412.1.1 vs. uniprot
Match: UPI000E518EB6 (C45 family autoproteolytic acyltransferase/hydolase n=1 Tax=Oceanicella sp. SM1341 TaxID=1548889 RepID=UPI000E518EB6)

HSP 1 Score: 134 bits (337), Expect = 9.180e-35
Identity = 70/170 (41.18%), Postives = 104/170 (61.18%), Query Frame = 1
Query:    1 RRRILMSQTLAEASDVILNTPRSASHNLMLSQIDGSGRAAAINFETTPEQLFWSFPTDGLLTHANHFKHPVALLSVKDIGLLRHPESLLRDSRAYERLDAGRASITVDTLKQVFADDFGEPHSICRPPAVRPDGSLSATVASLIMNAGSGDIWIAPSPFDGVPSYTRYKV 510
            RR  L ++T AEA + +  TPRS S+N+MLS     G A  IN ETTP ++FW  P DG++THANHF  P A   ++D G++   +SL RD R   RL+   ++IT+D+ K  F D FG P ++ R P +     +SATVAS+IM+A +G++ +   P++    Y  Y++
Sbjct:  204 RRLALEAETYAEALNAVARTPRSISNNMMLSCAGPEGDA--INLETTPGEVFWVLPEDGIVTHANHFVSPAARAKLRDGGVVEGMDSLYRDRRVRARLEKDGSAITLDSFKSAFEDRFGHPRAVLRTPDMTRTNRISATVASIIMDAEAGEMHVRQLPYEN-EEYVTYRL 370          
BLAST of mRNA_P-wetherbeei_contig51412.1.1 vs. uniprot
Match: A0A8J7PJ37_9GAMM (Peptidase C45 n=1 Tax=Rudaea sp. TaxID=2136325 RepID=A0A8J7PJ37_9GAMM)

HSP 1 Score: 130 bits (327), Expect = 2.690e-33
Identity = 66/159 (41.51%), Postives = 95/159 (59.75%), Query Frame = 1
Query:    1 RRRILMSQTLAEASDVILNTPRSASHNLMLSQIDGSGRAAAINFETTPEQLFWSFPTDGLLTHANHFKHPVALLSVKDIGLLRHPESLLRDSRAYERLDAGRASITVDTLKQVFADDFGEPHSICRPPAVRPDGSLSATVASLIMNAGSGDIWIAPSPF 477
            RR++L S  LA A   + N  R  S+NLMLS  DG     A++ E  P+++FW  P DG+L HANH+  P+A + ++D+GL  +PES+ R  R    L A R  +TVD +K    D+FG+P S+ R P      S+SATVA+ IM+  +  +WIA  P+
Sbjct:  206 RRKLLESHNLATAMGQVFNKSRLCSNNLMLSHADGE----AVDLECAPDEVFWIVPEDGVLVHANHWVSPIAQVKLRDLGLRNNPESIYRQRRVAAALRAKRGDVTVDDIKTALFDEFGKPDSVLRSPKPVSFDSISATVATTIMDTAARTMWIARQPY 360          
BLAST of mRNA_P-wetherbeei_contig51412.1.1 vs. uniprot
Match: A0A1M6HT71_9PROT (Isopenicillin-N N-acyltransferase like protein n=2 Tax=Roseomonas TaxID=125216 RepID=A0A1M6HT71_9PROT)

HSP 1 Score: 128 bits (322), Expect = 1.530e-32
Identity = 68/170 (40.00%), Postives = 102/170 (60.00%), Query Frame = 1
Query:    1 RRRILMSQTLAEASDVILNTPRSASHNLMLSQIDGSGRAAAINFETTPEQLFWSFPTDGLLTHANHFKHPVALLSVKDIGLLRHPESLLRDSRAYERLDAGRASITVDTLKQVFADDFGEPHSICRPPAVRPDGSLSATVASLIMNAGSGDIWIAPSPFDGVPSYTRYKV 510
            RR++L  + +A+A   +  T +SAS+N+++SQ  G     AINFE  P++ F    T+GL+ HANHF  PVAL  +KD G+   P+SL RD R  + L+A +  + V  +K    DD+  P ++CRPP +   G+LSATVA L+M    G + +AP P      +TRY++
Sbjct:  200 RRKVLEKEFVAQAFQAVYATVKSASNNVIVSQAGG----IAINFECAPDETFQVHATNGLIVHANHFISPVALSKLKDAGVATTPDSLYRDLRVRQLLEARKGGLDVQAVKDALFDDYQSPWAVCRPPRLNAAGNLSATVAMLVMQPAKGVLEVAPLPALN-RQFTRYEL 364          
BLAST of mRNA_P-wetherbeei_contig51412.1.1 vs. uniprot
Match: A0A1E4DV71_9HYPH (Uncharacterized protein n=2 Tax=Devosiaceae TaxID=2831106 RepID=A0A1E4DV71_9HYPH)

HSP 1 Score: 127 bits (318), Expect = 4.770e-32
Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = 1
Query:    1 RRRILMSQTLAEASDVILNTPRSASHNLMLSQIDGSGRAAAINFETTPEQLFWSFPTDGLLTHANHFKHPVALLSVKDIGLLRHPESLLRDSRAYERLDAGRASITVDTLKQVFADDFGEPHSICRPPAVRPDGSLSATVASLIMNAGSGDIWIAPSPF 477
            RR +L+ +TL EA  VI+ +PR+ SHN MLS  DG     AI+ ETTP  +FW  P DGLL HANHF  P AL+S  D G+ R P+SL+R+      L+     +   T+   F D    P+ + +PP     G + ATVA++IM    G +W++  P+
Sbjct:  196 RRNVLLQKTLGEAIGVIMKSPRNYSHNFMLSHRDGM----AIDLETTPSDVFWLKPRDGLLVHANHFTSPAALVSAVDEGVRRSPDSLVREMLIEGTLNRRSGPVDRQTIIDAFMDSTDAPYGVLQPPRSEKAGVMEATVATIIMEPARGRMWVSRQPY 350          
BLAST of mRNA_P-wetherbeei_contig51412.1.1 vs. uniprot
Match: A0A848HB84_9BURK (Acyl-CoA--6-aminopenicillanic acid acyltransferase n=1 Tax=Ramlibacter agri TaxID=2728837 RepID=A0A848HB84_9BURK)

HSP 1 Score: 126 bits (316), Expect = 1.080e-31
Identity = 62/158 (39.24%), Postives = 101/158 (63.92%), Query Frame = 1
Query:    1 RRRILMSQTLAEASDVILNTPRSASHNLMLSQIDGSGRAAAINFETTPEQLFWSFPTDGLLTHANHFKHPVALLSVKDIGLLRHPESLLRDSRAYERLDAGRASITVDTLKQVFADDFGEPHSICRPPAVRPDGSLSATVASLIMNAGSGDIWIAPSP 474
            RR++L ++ +A A   +  TP+SAS+NLM+S   G G    ++ E  P++ F   P +G+L HANH++ PVAL  ++D G+   P+SL RD R  + L+A    + +D L+  F DDF +P S+CRPP +  +G++SA+VA ++M+  +G + +AP P
Sbjct:  202 RRKVLETEHVALALRTVYATPKSASNNLMVSHAGGFG----LDIECAPDESFLVHPVNGMLVHANHWQSPVALGKLRDTGIANSPDSLYRDVRVRQLLEADSGKLGLDHLRAAFFDDFAKPWSVCRPPRMTVEGNMSASVAMVLMDPAAGRMEVAPLP 355          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51412.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001883BA016.230e-4948.82C45 family autoproteolytic acyltransferase/hydolas... [more]
A0A7W1G8L3_9BACT5.370e-4547.06Peptidase C45 n=1 Tax=Pyrinomonadaceae bacterium T... [more]
UPI001B1ED0248.210e-4149.40Acyl-CoA--6-aminopenicillanic acid acyl-transferas... [more]
A0A2E7IQQ2_9GAMM8.900e-3945.88Uncharacterized protein n=1 Tax=Spongiibacteraceae... [more]
UPI001EF591AD6.990e-3848.75C45 family peptidase n=1 Tax=Microvirga sp. ACRRW ... [more]
UPI000E518EB69.180e-3541.18C45 family autoproteolytic acyltransferase/hydolas... [more]
A0A8J7PJ37_9GAMM2.690e-3341.51Peptidase C45 n=1 Tax=Rudaea sp. TaxID=2136325 Rep... [more]
A0A1M6HT71_9PROT1.530e-3240.00Isopenicillin-N N-acyltransferase like protein n=2... [more]
A0A1E4DV71_9HYPH4.770e-3240.88Uncharacterized protein n=2 Tax=Devosiaceae TaxID=... [more]
A0A848HB84_9BURK1.080e-3139.24Acyl-CoA--6-aminopenicillanic acid acyltransferase... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig51412contigP-wetherbeei_contig51412:35..553 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1121861.KB899920_gene2919
PFAMsAAT
Model size519
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.32e-30
EggNOG OGsCOG4927@1|root,COG4927@2|Bacteria,1NKHP@1224|Proteobacteria,2U18B@28211|Alphaproteobacteria,2JUTA@204441|Rhodospirillales
DescriptionAcyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
Cds size504
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186772.4683776-CDS-P-wetherbeei_contig51412:34..5381683186772.4683776-CDS-P-wetherbeei_contig51412:34..538Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig51412 35..538 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186772.4784217-UTR-P-wetherbeei_contig51412:538..5531683186772.4784217-UTR-P-wetherbeei_contig51412:538..553Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig51412 539..553 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig51412.1.1prot_P-wetherbeei_contig51412.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig51412 35..538 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig51412.1.1

>prot_P-wetherbeei_contig51412.1.1 ID=prot_P-wetherbeei_contig51412.1.1|Name=mRNA_P-wetherbeei_contig51412.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=168bp
MSQTLAEASDVILNTPRSASHNLMLSQIDGSGRAAAINFETTPEQLFWSF
PTDGLLTHANHFKHPVALLSVKDIGLLRHPESLLRDSRAYERLDAGRASI
TVDTLKQVFADDFGEPHSICRPPAVRPDGSLSATVASLIMNAGSGDIWIA
PSPFDGVPSYTRYKVAA*
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mRNA from alignment at P-wetherbeei_contig51412:35..553-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig51412.1.1 ID=mRNA_P-wetherbeei_contig51412.1.1|Name=mRNA_P-wetherbeei_contig51412.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig51412:35..553- (Phaeothamnion wetherbeei SAG_119_79)
CGGCGTCGTATATTGATGTCGCAAACCTTGGCGGAAGCGTCCGACGTCAT TTTGAATACGCCGCGATCCGCCTCGCACAATCTGATGCTTAGCCAGATCG ACGGCAGCGGCCGCGCCGCCGCTATCAACTTTGAGACGACGCCAGAGCAG TTGTTCTGGAGTTTTCCGACGGATGGCTTGCTGACTCACGCGAATCATTT CAAGCATCCCGTCGCACTCCTCAGCGTGAAGGACATTGGCCTGTTGCGTC ACCCTGAGTCCCTCTTGAGGGACTCACGTGCCTACGAGCGGCTTGATGCG GGTAGGGCGTCCATCACTGTCGATACCCTCAAGCAAGTGTTCGCCGACGA TTTCGGCGAACCGCATTCGATATGTCGTCCTCCCGCCGTCCGTCCGGACG GGAGCCTGTCTGCGACCGTTGCAAGCCTCATTATGAACGCGGGATCCGGC GATATCTGGATTGCTCCTTCGCCATTCGACGGCGTGCCGTCCTACACACG TTACAAGGTGGCGGCATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig51412:35..553-

>mRNA_P-wetherbeei_contig51412.1.1 ID=mRNA_P-wetherbeei_contig51412.1.1|Name=mRNA_P-wetherbeei_contig51412.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig51412:35..553- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGCAAACCTTGGCGGAAGCGTCCGACGTCATTTTGAATACGCCGCG
ATCCGCCTCGCACAATCTGATGCTTAGCCAGATCGACGGCAGCGGCCGCG
CCGCCGCTATCAACTTTGAGACGACGCCAGAGCAGTTGTTCTGGAGTTTT
CCGACGGATGGCTTGCTGACTCACGCGAATCATTTCAAGCATCCCGTCGC
ACTCCTCAGCGTGAAGGACATTGGCCTGTTGCGTCACCCTGAGTCCCTCT
TGAGGGACTCACGTGCCTACGAGCGGCTTGATGCGGGTAGGGCGTCCATC
ACTGTCGATACCCTCAAGCAAGTGTTCGCCGACGATTTCGGCGAACCGCA
TTCGATATGTCGTCCTCCCGCCGTCCGTCCGGACGGGAGCCTGTCTGCGA
CCGTTGCAAGCCTCATTATGAACGCGGGATCCGGCGATATCTGGATTGCT
CCTTCGCCATTCGACGGCGTGCCGTCCTACACACGTTACAAGGTGGCGGC
ATGA
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