mRNA_P-wetherbeei_contig51399.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig51399.1.1 vs. uniprot
Match: A0A346A448_9HYPH (Probable membrane transporter protein n=2 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A448_9HYPH) HSP 1 Score: 236 bits (602), Expect = 5.000e-76 Identity = 120/154 (77.92%), Postives = 137/154 (88.96%), Query Frame = 1
Query: 1 VVFALFISARMLFGTDRMSLGSELPGRALLWFFGFVTGLFSSLVGVSGGAVSNAVLTLYGQTMQRAVATSAGVGVPITIAGTVGYMLAGLPHQAQLPPLSIGFVSVIGVALMAPVSSYTTSYGVRLAHWLPRRKLEISFGLFLMLVSLRFLVSL 462
VVFA FI+ RML G DR+SLG+ELPGRA+L +GF+TGL SSLVGVSGGAV+NAVLTLYG+ M + V T+AG+GVPITIAGT+GYMLAG PHQAQLPPLSIGFVS+IG ALMAPVSSYT SYGVRLAHWLPRR+LEI+FG+FL L SLRF+ SL
Sbjct: 111 VVFAAFIATRMLIGADRLSLGTELPGRAVLSVYGFITGLVSSLVGVSGGAVANAVLTLYGRPMHQTVGTAAGIGVPITIAGTIGYMLAGWPHQAQLPPLSIGFVSLIGFALMAPVSSYTASYGVRLAHWLPRRQLEIAFGIFLALASLRFVFSL 264
BLAST of mRNA_P-wetherbeei_contig51399.1.1 vs. uniprot
Match: A0A0Q7U3D0_9HYPH (Probable membrane transporter protein n=2 Tax=Pseudolabrys sp. Root1462 TaxID=1736466 RepID=A0A0Q7U3D0_9HYPH) HSP 1 Score: 208 bits (529), Expect = 7.500e-65 Identity = 107/154 (69.48%), Postives = 128/154 (83.12%), Query Frame = 1
Query: 1 VVFALFISARMLFGTDRMSLGSELPGRALLWFFGFVTGLFSSLVGVSGGAVSNAVLTLYGQTMQRAVATSAGVGVPITIAGTVGYMLAGLPHQAQLPPLSIGFVSVIGVALMAPVSSYTTSYGVRLAHWLPRRKLEISFGLFLMLVSLRFLVSL 462
VVF +FIS +MLF DR ++ + LPG AL+ +GF+ GL SSLVGVSGGAVSNA+LTL+GQ MQRAVATSAG+GVPIT+ G +GY +AG PH AQLPPLS+GF+SVIG LMAPVSSYT +YGVRLAH LPRR LEI FGLFL+ VS RF+++L
Sbjct: 120 VVFTIFISIKMLFIGDRWNVSNRLPGPALVALYGFIMGLVSSLVGVSGGAVSNAMLTLHGQPMQRAVATSAGIGVPITVVGAIGYAIAGWPHLAQLPPLSLGFISVIGFVLMAPVSSYTATYGVRLAHALPRRYLEIGFGLFLLAVSARFVLTL 273
BLAST of mRNA_P-wetherbeei_contig51399.1.1 vs. uniprot
Match: A0A537L2W4_9PROT (Probable membrane transporter protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537L2W4_9PROT) HSP 1 Score: 206 bits (524), Expect = 4.420e-64 Identity = 107/154 (69.48%), Postives = 129/154 (83.77%), Query Frame = 1
Query: 1 VVFALFISARMLFGTDRMSLGSELPGRALLWFFGFVTGLFSSLVGVSGGAVSNAVLTLYGQTMQRAVATSAGVGVPITIAGTVGYMLAGLPHQAQLPPLSIGFVSVIGVALMAPVSSYTTSYGVRLAHWLPRRKLEISFGLFLMLVSLRFLVSL 462
VV A+ ISAR LFG DR LG LPGR + +G GL SSL+GVSGG++S VLTLYG+ + AV T+AG+GVP+TIAGT+GY+LAGLPHQA LPPLSIGFVS+IGVALMAPVSS+ SYGVRLAHWLP+R+LEI+FG+FL+LVS+RF+VSL
Sbjct: 122 VVLAMIISAR-LFGGDRWRLGDTLPGRFAMTIYGLAIGLASSLMGVSGGSMSTMVLTLYGKPIHAAVGTAAGLGVPLTIAGTIGYVLAGLPHQASLPPLSIGFVSLIGVALMAPVSSFMASYGVRLAHWLPKRQLEIAFGIFLLLVSVRFIVSL 274
BLAST of mRNA_P-wetherbeei_contig51399.1.1 vs. uniprot
Match: A0A2C9D431_9HYPH (Probable membrane transporter protein n=1 Tax=Hartmannibacter diazotrophicus TaxID=1482074 RepID=A0A2C9D431_9HYPH) HSP 1 Score: 204 bits (520), Expect = 1.840e-63 Identity = 103/154 (66.88%), Postives = 124/154 (80.52%), Query Frame = 1
Query: 1 VVFALFISARMLFGTDRMSLGSELPGRALLWFFGFVTGLFSSLVGVSGGAVSNAVLTLYGQTMQRAVATSAGVGVPITIAGTVGYMLAGLPHQAQLPPLSIGFVSVIGVALMAPVSSYTTSYGVRLAHWLPRRKLEISFGLFLMLVSLRFLVSL 462
V+FA IS RM GTDR SLG+ELPGR + +G +TGL SSLVGVSGGA SN ++TLYGQ + RAVATS+G+GVPIT+ G +GYM+AG ++ LPPL++GFVS+IG ALMAPV+S+TTSYGVRLAHWLP R LEI FGLFL +RFLVSL
Sbjct: 121 VIFATLISLRMFLGTDRWSLGTELPGRGPMTIYGMMTGLISSLVGVSGGAFSNTIMTLYGQPIHRAVATSSGIGVPITVVGAIGYMIAGWRYRDMLPPLTVGFVSLIGFALMAPVASWTTSYGVRLAHWLPHRVLEIGFGLFLGSAGVRFLVSL 274
BLAST of mRNA_P-wetherbeei_contig51399.1.1 vs. uniprot
Match: A0A363TM56_9BRAD (Probable membrane transporter protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TM56_9BRAD) HSP 1 Score: 202 bits (515), Expect = 1.080e-62 Identity = 102/154 (66.23%), Postives = 127/154 (82.47%), Query Frame = 1
Query: 1 VVFALFISARMLFGTDRMSLGSELPGRALLWFFGFVTGLFSSLVGVSGGAVSNAVLTLYGQTMQRAVATSAGVGVPITIAGTVGYMLAGLPHQAQLPPLSIGFVSVIGVALMAPVSSYTTSYGVRLAHWLPRRKLEISFGLFLMLVSLRFLVSL 462
VV I+ ++LFG + + ++LPGRAL+ +GFV GL SSL+GVSGG++SN +LTL+G+ + AVATSAG+GVPITIAGT+GY LAGLPH A LPPLSIGFVS+IG ALMAPVSSY YGVRLAHWLP+R+LEI+FG+FL+ V+LRFL SL
Sbjct: 122 VVIVTVIAVKLLFGRESWRIAADLPGRALMSLYGFVIGLASSLMGVSGGSISNMILTLHGKPIHHAVATSAGLGVPITIAGTLGYALAGLPHLAALPPLSIGFVSLIGFALMAPVSSYMAGYGVRLAHWLPKRRLEIAFGVFLLAVALRFLASL 275
BLAST of mRNA_P-wetherbeei_contig51399.1.1 vs. uniprot
Match: A0A371B3E2_9HYPH (Probable membrane transporter protein n=1 Tax=Pseudolabrys sp. GY_H TaxID=2292256 RepID=A0A371B3E2_9HYPH) HSP 1 Score: 196 bits (498), Expect = 3.910e-60 Identity = 98/155 (63.23%), Postives = 123/155 (79.35%), Query Frame = 1
Query: 1 VVFALFISARMLFGTDRMSLGSELPGRALLWFFGFVTGLFSSLVGVSGGAVSNAVLTLYGQTMQRAVATSAGVGVPITIAGTVGYMLAGLPHQAQLPPLSIGFVSVIGVALMAPVSSYTTSYGVRLAHWLPRRKLEISFGLFLMLVSLRFLVSLF 465
V F ++ +ML GT+R ++G+ELPGR +L F+GF G SSLVGVSGG S A+LTLYGQ + RAVATSAG+GVPITIAGT+GY++AG PH +LPPLS+GFVS+ G LMAPV+S+ T+YGVRLAH L RR LE++F FL+LV RFL+SLF
Sbjct: 122 VTFCALMATKMLAGTNRWNIGTELPGRVVLSFYGFAMGALSSLVGVSGGGFSTAILTLYGQPIHRAVATSAGLGVPITIAGTIGYIIAGWPHMGELPPLSLGFVSLPGFVLMAPVASFMTTYGVRLAHGLSRRSLEVAFACFLLLVGTRFLISLF 276
BLAST of mRNA_P-wetherbeei_contig51399.1.1 vs. uniprot
Match: UPI0010BEDAB5 (sulfite exporter TauE/SafE family protein n=1 Tax=Pseudolabrys sp. FHR47 TaxID=2562284 RepID=UPI0010BEDAB5) HSP 1 Score: 195 bits (496), Expect = 7.850e-60 Identity = 99/155 (63.87%), Postives = 123/155 (79.35%), Query Frame = 1
Query: 1 VVFALFISARMLFGTDRMSLGSELPGRALLWFFGFVTGLFSSLVGVSGGAVSNAVLTLYGQTMQRAVATSAGVGVPITIAGTVGYMLAGLPHQAQLPPLSIGFVSVIGVALMAPVSSYTTSYGVRLAHWLPRRKLEISFGLFLMLVSLRFLVSLF 465
V F ++A+MLFGT R +LG+ELPGR +L +GF G SSLVGVSGG S A+LTLYGQ + RAVATSAG+GVPIT+ GT+GY++AG PH ++LPPLS+GFVS+ G LMAPV++Y TSYGV+LAH L RR LE++F FL+LV RFLVSLF
Sbjct: 122 VTFCALMAAKMLFGTHRGNLGTELPGRVVLSLYGFAMGALSSLVGVSGGGFSTAILTLYGQPIHRAVATSAGLGVPITVVGTIGYIIAGWPHLSELPPLSLGFVSLPGFVLMAPVAAYMTSYGVQLAHGLSRRHLEVAFACFLLLVGTRFLVSLF 276
BLAST of mRNA_P-wetherbeei_contig51399.1.1 vs. uniprot
Match: A0A1Q4DGD8_9HYPH (Probable membrane transporter protein n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DGD8_9HYPH) HSP 1 Score: 193 bits (491), Expect = 2.870e-59 Identity = 96/152 (63.16%), Postives = 122/152 (80.26%), Query Frame = 1
Query: 4 VFALFISARMLFGTDRMSLGSELPGRALLWFFGFVTGLFSSLVGVSGGAVSNAVLTLYGQTMQRAVATSAGVGVPITIAGTVGYMLAGLPHQAQLPPLSIGFVSVIGVALMAPVSSYTTSYGVRLAHWLPRRKLEISFGLFLMLVSLRFLVS 459
V A F++ + G D + ELPG+ + +GF+ GL +SL+GVSGG+VSNAVL L+G + +VATSAG+GVPITIAG VGYMLAGL +Q+Q+PPLSIGFVS+IGV LMAPV+SY YGV+LAHW+PRRKLEI+FG+FL+LVS RF+VS
Sbjct: 108 VIATFVAIKSFLGNDNWQVAKELPGQPAMSGYGFLVGLCASLMGVSGGSVSNAVLMLHGVPIHNSVATSAGIGVPITIAGAVGYMLAGLAYQSQMPPLSIGFVSIIGVVLMAPVTSYMAGYGVKLAHWMPRRKLEIAFGIFLLLVSARFVVS 259
BLAST of mRNA_P-wetherbeei_contig51399.1.1 vs. uniprot
Match: A0A537PIL2_9PROT (Probable membrane transporter protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537PIL2_9PROT) HSP 1 Score: 194 bits (492), Expect = 3.250e-59 Identity = 101/154 (65.58%), Postives = 124/154 (80.52%), Query Frame = 1
Query: 1 VVFALFISARMLFGTDRMSLGSELPGRALLWFFGFVTGLFSSLVGVSGGAVSNAVLTLYGQTMQRAVATSAGVGVPITIAGTVGYMLAGLPHQAQLPPLSIGFVSVIGVALMAPVSSYTTSYGVRLAHWLPRRKLEISFGLFLMLVSLRFLVSL 462
VV A I+A++LFG + L SELPGR + +GF+ GL S+L+GVSGG+VSN +LTL+G+ + AVATSAG+GVPIT+AGT GYMLAGLPHQA LPPLSIGFVS++GVA+MAPVSS T YG RLAH L +R+LEI+FGLFL+ S RFL SL
Sbjct: 122 VVIASLIAAKLLFGRETWRLASELPGRVGMAGYGFLVGLCSALMGVSGGSVSNMILTLHGKPLHNAVATSAGLGVPITVAGTAGYMLAGLPHQALLPPLSIGFVSLLGVAVMAPVSSLTAGYGARLAHALSKRRLEIAFGLFLLAASARFLASL 275
BLAST of mRNA_P-wetherbeei_contig51399.1.1 vs. uniprot
Match: A0A7C2UDT9_9PROT (Probable membrane transporter protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2UDT9_9PROT) HSP 1 Score: 186 bits (473), Expect = 2.350e-56 Identity = 98/154 (63.64%), Postives = 118/154 (76.62%), Query Frame = 1
Query: 1 VVFALFISARMLFGTDRMSLGSELPGRALLWFFGFVTGLFSSLVGVSGGAVSNAVLTLYGQTMQRAVATSAGVGVPITIAGTVGYMLAGLPHQAQLPPLSIGFVSVIGVALMAPVSSYTTSYGVRLAHWLPRRKLEISFGLFLMLVSLRFLVSL 462
+V A I+A++LFG LG +LP L +G GL +SL GVSGG++ VLTLYG+ + +AVATSAG+ VPI IAGT+GYM+AGL HQAQLPPLSIGFVS+IG ALMAPVSS+T SYG +LAH LPRRKLEI+FGLFL+ SLRF SL
Sbjct: 121 IVIAALIAAKLLFGRQSWRLGDDLPTHPLTRLYGLAVGLMASLTGVSGGSLCTMVLTLYGKPIHQAVATSAGIVVPIAIAGTLGYMVAGLLHQAQLPPLSIGFVSLIGFALMAPVSSFTASYGAKLAHALPRRKLEIAFGLFLLAASLRFFASL 274 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51399.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig51399.1.1 >prot_P-wetherbeei_contig51399.1.1 ID=prot_P-wetherbeei_contig51399.1.1|Name=mRNA_P-wetherbeei_contig51399.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=146bp MLFGTDRMSLGSELPGRALLWFFGFVTGLFSSLVGVSGGAVSNAVLTLYGback to top mRNA from alignment at P-wetherbeei_contig51399:4..471+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig51399.1.1 ID=mRNA_P-wetherbeei_contig51399.1.1|Name=mRNA_P-wetherbeei_contig51399.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=468bp|location=Sequence derived from alignment at P-wetherbeei_contig51399:4..471+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig51399:4..471+ >mRNA_P-wetherbeei_contig51399.1.1 ID=mRNA_P-wetherbeei_contig51399.1.1|Name=mRNA_P-wetherbeei_contig51399.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=438bp|location=Sequence derived from alignment at P-wetherbeei_contig51399:4..471+ (Phaeothamnion wetherbeei SAG_119_79)back to top |